RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 ASXL1Q8IXJ9 1541 aa10.18□□□□□ -0.78
LINC00458-204ENST00000606055 ATF3P18847 181 aa10.16□□□□□ -0.78
LINC00458-204ENST00000606055 PUS7Q96PZ0 661 aaKnown RBP10.16□□□□□ -0.78
LINC00458-204ENST00000606055 CARD11Q9BXL7 1154 aa10.16□□□□□ -0.78
LINC00458-204ENST00000606055 PHLPP1O60346 1717 aa10.16□□□□□ -0.78
LINC00458-204ENST00000606055 ARHGEF28Q8N1W1 1705 aaKnown RBP10.16□□□□□ -0.78
LINC00458-204ENST00000606055 ADGRL3Q9HAR2 1447 aa10.16□□□□□ -0.78
LINC00458-204ENST00000606055 NBPF1Q3BBV0 1214 aa10.15□□□□□ -0.78
LINC00458-204ENST00000606055 TMEM132EQ6IEE7 984 aa10.15□□□□□ -0.78
LINC00458-204ENST00000606055 CADPS2Q86UW7 1296 aa10.15□□□□□ -0.78
LINC00458-204ENST00000606055 C19orf44Q9H6X5 657 aa10.15□□□□□ -0.78
LINC00458-204ENST00000606055 STK26Q9P289 416 aa10.15□□□□□ -0.78
LINC00458-204ENST00000606055 RGPD8O14715 1765 aaPredicted RBP10.15□□□□□ -0.78
LINC00458-204ENST00000606055 DCCP43146 1447 aa10.15□□□□□ -0.79
LINC00458-204ENST00000606055 ROBO2Q9HCK4 1378 aa10.14□□□□□ -0.79
LINC00458-204ENST00000606055 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC00458-204ENST00000606055 USP47Q96K76 1375 aa10.14□□□□□ -0.79
LINC00458-204ENST00000606055 CDC42BPGQ6DT37 1551 aa10.13□□□□□ -0.79
LINC00458-204ENST00000606055 FMN2Q9NZ56 1722 aa10.13□□□□□ -0.79
LINC00458-204ENST00000606055 SLAIN2Q9P270 581 aa10.12□□□□□ -0.79
LINC00458-204ENST00000606055 CENPJQ9HC77 1338 aaPredicted RBP10.11□□□□□ -0.79
LINC00458-204ENST00000606055 ADGRB2O60241 1585 aa10.11□□□□□ -0.79
LINC00458-204ENST00000606055 NHSL1Q5SYE7 1610 aa10.11□□□□□ -0.79
LINC00458-204ENST00000606055 HSPA1LP34931 641 aa10.1□□□□□ -0.79
LINC00458-204ENST00000606055 CDCA8Q53HL2 280 aa10.1□□□□□ -0.79
LINC00458-204ENST00000606055 POGKQ9P215 609 aa10.1□□□□□ -0.79
LINC00458-204ENST00000606055 QRICH2Q9H0J4 1663 aa10.09□□□□□ -0.79
LINC00458-204ENST00000606055 MST1RQ04912 1400 aa10.09□□□□□ -0.79
LINC00458-204ENST00000606055 WAPLQ7Z5K2 1190 aa10.09□□□□□ -0.79
LINC00458-204ENST00000606055 TESK2Q96S53 571 aa10.09□□□□□ -0.79
LINC00458-204ENST00000606055 TRAK1Q9UPV9 953 aa10.09□□□□□ -0.79
LINC00458-204ENST00000606055 ITSN1Q15811 1721 aa10.09□□□□□ -0.79
LINC00458-204ENST00000606055 KIF1AQ12756 1690 aa10.09□□□□□ -0.79
LINC00458-204ENST00000606055 AHDC1Q5TGY3 1603 aaPredicted RBP10.08□□□□□ -0.8
LINC00458-204ENST00000606055 PRAM1Q96QH2 718 aa10.08□□□□□ -0.8
LINC00458-204ENST00000606055 PLEKHH1Q9ULM0 1364 aa10.08□□□□□ -0.8
LINC00458-204ENST00000606055 COL16A1Q07092 1604 aaPredicted RBP10.07□□□□□ -0.8
LINC00458-204ENST00000606055 C1orf167Q5SNV9 1468 aa10.07□□□□□ -0.8
LINC00458-204ENST00000606055 NINLQ9Y2I6 1382 aa10.07□□□□□ -0.8
LINC00458-204ENST00000606055 ST20-MTHFSA0A0A6YYL1 179 aa10.07□□□□□ -0.8
LINC00458-204ENST00000606055 SAFB2Q14151 953 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00458-204ENST00000606055 ANKARQ7Z5J8 1434 aa10.07□□□□□ -0.8
LINC00458-204ENST00000606055 EVC2Q86UK5 1308 aa10.07□□□□□ -0.8
LINC00458-204ENST00000606055 SHPRHQ149N8 1683 aa10.06□□□□□ -0.8
LINC00458-204ENST00000606055 HSPA5P11021 654 aaKnown RBP10.06□□□□□ -0.8
LINC00458-204ENST00000606055 TMF1P82094 1093 aa10.06□□□□□ -0.8
LINC00458-204ENST00000606055 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
LINC00458-204ENST00000606055 WASLO00401 505 aaPredicted RBP10.04□□□□□ -0.8
LINC00458-204ENST00000606055 BRINP3Q76B58 766 aa10.04□□□□□ -0.8
LINC00458-204ENST00000606055 MINK1Q8N4C8 1332 aaPredicted RBP10.04□□□□□ -0.8
LINC00458-204ENST00000606055 USP32Q8NFA0 1604 aa10.04□□□□□ -0.8
LINC00458-204ENST00000606055 MED1Q15648 1581 aaPredicted RBP10.03□□□□□ -0.8
LINC00458-204ENST00000606055 TULP4Q9NRJ4 1543 aa10.02□□□□□ -0.8
LINC00458-204ENST00000606055 BRD4O60885 1362 aaPredicted RBP10.02□□□□□ -0.8
LINC00458-204ENST00000606055 NUTM2FA1L443 756 aa10.02□□□□□ -0.81
LINC00458-204ENST00000606055 ESCO1Q5FWF5 840 aa10.02□□□□□ -0.81
LINC00458-204ENST00000606055 ORAI2Q96SN7 254 aa10.01□□□□□ -0.81
LINC00458-204ENST00000606055 HIRIP3Q9BW71 556 aaPredicted RBP10.01□□□□□ -0.81
LINC00458-204ENST00000606055 TOPAZ1Q8N9V7 1692 aa10.01□□□□□ -0.81
LINC00458-204ENST00000606055 JCADQ9P266 1359 aa10.01□□□□□ -0.81
LINC00458-204ENST00000606055 MARF1Q9Y4F3 1742 aaKnown RBP10□□□□□ -0.81
LINC00458-204ENST00000606055 CCDC61Q9Y6R9 512 aa10□□□□□ -0.81
LINC00458-204ENST00000606055 NPHP3Q7Z494 1330 aa10□□□□□ -0.81
LINC00458-204ENST00000606055 ATP7BP35670 1465 aa9.99□□□□□ -0.81
LINC00458-204ENST00000606055 PLEKHG3A1L390 1219 aa9.99□□□□□ -0.81
LINC00458-204ENST00000606055 CDK19Q9BWU1 502 aa9.99□□□□□ -0.81
LINC00458-204ENST00000606055 DDX17Q92841 729 aaKnown RBP9.98□□□□□ -0.81
LINC00458-204ENST00000606055 LRRC59Q96AG4 307 aaKnown RBP9.98□□□□□ -0.81
LINC00458-204ENST00000606055 PHF8Q9UPP1 1060 aa9.98□□□□□ -0.81
LINC00458-204ENST00000606055 POLR3AO14802 1390 aaPredicted RBP9.98□□□□□ -0.81
LINC00458-204ENST00000606055 CCDC7Q96M83 1385 aa9.98□□□□□ -0.81
LINC00458-204ENST00000606055 COL22A1Q8NFW1 1626 aaPredicted RBP9.97□□□□□ -0.81
LINC00458-204ENST00000606055 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
LINC00458-204ENST00000606055 ZNF692Q9BU19 519 aaPredicted RBP9.97□□□□□ -0.81
LINC00458-204ENST00000606055 PHF23Q9BUL5 403 aaPredicted RBP9.97□□□□□ -0.81
LINC00458-204ENST00000606055 KIF7Q2M1P5 1343 aa9.97□□□□□ -0.81
LINC00458-204ENST00000606055 PXDNQ92626 1479 aa9.97□□□□□ -0.81
LINC00458-204ENST00000606055 TRPM3Q9HCF6 1732 aaPredicted RBP9.96□□□□□ -0.81
LINC00458-204ENST00000606055 FOXO3O43524 673 aa9.96□□□□□ -0.82
LINC00458-204ENST00000606055 NUDT16Q96DE0 195 aaKnown RBP9.96□□□□□ -0.82
LINC00458-204ENST00000606055 SOS2Q07890 1332 aaPredicted RBP9.96□□□□□ -0.82
LINC00458-204ENST00000606055 SPATA31A6Q5VVP1 1343 aa9.96□□□□□ -0.82
LINC00458-204ENST00000606055 WASHC2AQ641Q2 1341 aa9.96□□□□□ -0.82
LINC00458-204ENST00000606055 AKAP12Q02952 1782 aa9.96□□□□□ -0.82
LINC00458-204ENST00000606055 SRPK2P78362 688 aaKnown RBP9.95□□□□□ -0.82
LINC00458-204ENST00000606055 PSME1Q06323 249 aa9.95□□□□□ -0.82
LINC00458-204ENST00000606055 ANKRD36BQ8N2N9 1353 aa9.95□□□□□ -0.82
LINC00458-204ENST00000606055 CPSF1Q10570 1443 aaKnown RBP9.95□□□□□ -0.82
LINC00458-204ENST00000606055 ABCA3Q99758 1704 aa9.95□□□□□ -0.82
LINC00458-204ENST00000606055 ALS2Q96Q42 1657 aa9.94□□□□□ -0.82
LINC00458-204ENST00000606055 PNPLA6Q8IY17 1366 aa9.94□□□□□ -0.82
LINC00458-204ENST00000606055 PRR36Q9H6K5 1346 aa9.94□□□□□ -0.82
LINC00458-204ENST00000606055 XPCQ01831 940 aaPredicted RBP9.94□□□□□ -0.82
LINC00458-204ENST00000606055 MEX3CQ5U5Q3 659 aaKnown RBP9.94□□□□□ -0.82
LINC00458-204ENST00000606055 NGDNQ8NEJ9 315 aaKnown RBP9.94□□□□□ -0.82
LINC00458-204ENST00000606055 PMFBP1Q8TBY8 1022 aa9.94□□□□□ -0.82
LINC00458-204ENST00000606055 TERF2IPQ9NYB0 399 aa9.94□□□□□ -0.82
LINC00458-204ENST00000606055 PPIP5K1Q6PFW1 1433 aa9.93□□□□□ -0.82
LINC00458-204ENST00000606055 NPC1L1Q9UHC9 1359 aa9.93□□□□□ -0.82
LINC00458-204ENST00000606055 C11orf95C9JLR9 678 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms