RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
SRGAP2-209ENST00000604247 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
SRGAP2-209ENST00000604247 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
SRGAP2-209ENST00000604247 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
SRGAP2-209ENST00000604247 SETBP1Q9Y6X0 1596 aa16.93■□□□□ 0.3
SRGAP2-209ENST00000604247 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
SRGAP2-209ENST00000604247 POLR3AO14802 1390 aaPredicted RBP16.92■□□□□ 0.3
SRGAP2-209ENST00000604247 FAM69CQ0P6D2 419 aa16.92■□□□□ 0.3
SRGAP2-209ENST00000604247 GLI2P10070 1586 aa16.91■□□□□ 0.3
SRGAP2-209ENST00000604247 IDI1Q13907 227 aa16.91■□□□□ 0.3
SRGAP2-209ENST00000604247 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
SRGAP2-209ENST00000604247 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
SRGAP2-209ENST00000604247 QRICH2Q9H0J4 1663 aa16.9■□□□□ 0.3
SRGAP2-209ENST00000604247 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
SRGAP2-209ENST00000604247 ARHGAP31Q2M1Z3 1444 aa16.89■□□□□ 0.29
SRGAP2-209ENST00000604247 RRP7AQ9Y3A4 280 aaKnown RBP16.89■□□□□ 0.29
SRGAP2-209ENST00000604247 LAS1LQ9Y4W2 734 aaKnown RBP16.88■□□□□ 0.29
SRGAP2-209ENST00000604247 ZC3H13Q5T200 1668 aaKnown RBP16.88■□□□□ 0.29
SRGAP2-209ENST00000604247 NEXMIFQ5QGS0 1516 aa16.88■□□□□ 0.29
SRGAP2-209ENST00000604247 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
SRGAP2-209ENST00000604247 NGEFQ8N5V2 710 aa16.88■□□□□ 0.29
SRGAP2-209ENST00000604247 DIP2BQ9P265 1576 aa16.87■□□□□ 0.29
SRGAP2-209ENST00000604247 FBXO31Q5XUX0 539 aaPredicted RBP16.87■□□□□ 0.29
SRGAP2-209ENST00000604247 MTHFSP49914 203 aa16.87■□□□□ 0.29
SRGAP2-209ENST00000604247 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
SRGAP2-209ENST00000604247 SHPRHQ149N8 1683 aa16.86■□□□□ 0.29
SRGAP2-209ENST00000604247 RGS3P49796 1198 aa16.86■□□□□ 0.29
SRGAP2-209ENST00000604247 TCP11L2Q8N4U5 519 aa16.85■□□□□ 0.29
SRGAP2-209ENST00000604247 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
SRGAP2-209ENST00000604247 C8orf34Q49A92 452 aa16.84■□□□□ 0.29
SRGAP2-209ENST00000604247 IGHDP01880 384 aa16.84■□□□□ 0.29
SRGAP2-209ENST00000604247 SAFB2Q14151 953 aaKnown RBP eCLIP16.84■□□□□ 0.29
SRGAP2-209ENST00000604247 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.28
SRGAP2-209ENST00000604247 FAM161AQ3B820 660 aa16.83■□□□□ 0.28
SRGAP2-209ENST00000604247 PANK1Q8TE04 598 aa16.83■□□□□ 0.28
SRGAP2-209ENST00000604247 CGNL1Q0VF96 1302 aa16.83■□□□□ 0.28
SRGAP2-209ENST00000604247 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
SRGAP2-209ENST00000604247 COG6Q9Y2V7 657 aa16.82■□□□□ 0.28
SRGAP2-209ENST00000604247 PDE3AQ14432 1141 aa16.81■□□□□ 0.28
SRGAP2-209ENST00000604247 EVC2Q86UK5 1308 aa16.81■□□□□ 0.28
SRGAP2-209ENST00000604247 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
SRGAP2-209ENST00000604247 FRAT1Q92837 279 aaPredicted RBP16.81■□□□□ 0.28
SRGAP2-209ENST00000604247 TSPOAP1O95153 1857 aa16.81■□□□□ 0.28
SRGAP2-209ENST00000604247 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
SRGAP2-209ENST00000604247 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
SRGAP2-209ENST00000604247 NEFMP07197 916 aa16.79■□□□□ 0.28
SRGAP2-209ENST00000604247 SLC52A1Q9NWF4 448 aa16.79■□□□□ 0.28
SRGAP2-209ENST00000604247 STK26Q9P289 416 aa16.79■□□□□ 0.28
SRGAP2-209ENST00000604247 PREX1Q8TCU6 1659 aa16.79■□□□□ 0.28
SRGAP2-209ENST00000604247 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
SRGAP2-209ENST00000604247 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
SRGAP2-209ENST00000604247 TMEM131LA2VDJ0 1609 aa16.79■□□□□ 0.28
SRGAP2-209ENST00000604247 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
SRGAP2-209ENST00000604247 ARHGEF28Q8N1W1 1705 aaKnown RBP16.78■□□□□ 0.28
SRGAP2-209ENST00000604247 CFAP53Q96M91 514 aa16.78■□□□□ 0.28
SRGAP2-209ENST00000604247 RARSP54136 660 aaKnown RBP16.78■□□□□ 0.28
SRGAP2-209ENST00000604247 IQSEC2Q5JU85 1478 aa16.77■□□□□ 0.28
SRGAP2-209ENST00000604247 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.28
SRGAP2-209ENST00000604247 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
SRGAP2-209ENST00000604247 USP32Q8NFA0 1604 aa16.77■□□□□ 0.28
SRGAP2-209ENST00000604247 ZFYVE9O95405 1425 aa16.77■□□□□ 0.27
SRGAP2-209ENST00000604247 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.27
SRGAP2-209ENST00000604247 TNNQ9UQP3 1299 aa16.77■□□□□ 0.27
SRGAP2-209ENST00000604247 U2AF1L5P0DN76 240 aaPredicted RBP16.76■□□□□ 0.27
SRGAP2-209ENST00000604247 U2AF1Q01081 240 aaKnown RBP eCLIP16.76■□□□□ 0.278e-6■□□□□ 10.6
SRGAP2-209ENST00000604247 WDR63Q8IWG1 891 aa16.76■□□□□ 0.27
SRGAP2-209ENST00000604247 PUS7Q96PZ0 661 aaKnown RBP16.76■□□□□ 0.27
SRGAP2-209ENST00000604247 RLBP1P12271 317 aa16.74■□□□□ 0.27
SRGAP2-209ENST00000604247 SRPK2P78362 688 aaKnown RBP16.74■□□□□ 0.27
SRGAP2-209ENST00000604247 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
SRGAP2-209ENST00000604247 CCDC27Q2M243 656 aa16.73■□□□□ 0.27
SRGAP2-209ENST00000604247 NINLQ9Y2I6 1382 aa16.73■□□□□ 0.27
SRGAP2-209ENST00000604247 GGNBP2Q9H3C7 697 aa16.73■□□□□ 0.27
SRGAP2-209ENST00000604247 A0A1W2PP64 1363 aa16.72■□□□□ 0.27
SRGAP2-209ENST00000604247 USP35Q9P2H5 1018 aa16.72■□□□□ 0.27
SRGAP2-209ENST00000604247 PTPRMP28827 1452 aa16.71■□□□□ 0.27
SRGAP2-209ENST00000604247 MLECQ14165 292 aa16.71■□□□□ 0.27
SRGAP2-209ENST00000604247 NSD2O96028 1365 aa16.71■□□□□ 0.27
SRGAP2-209ENST00000604247 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.26
SRGAP2-209ENST00000604247 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.26
SRGAP2-209ENST00000604247 MINK1Q8N4C8 1332 aaPredicted RBP16.71■□□□□ 0.26
SRGAP2-209ENST00000604247 AGLP35573 1532 aa16.7■□□□□ 0.26
SRGAP2-209ENST00000604247 REREQ9P2R6 1566 aa16.69■□□□□ 0.26
SRGAP2-209ENST00000604247 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
SRGAP2-209ENST00000604247 PRAM1Q96QH2 718 aa16.69■□□□□ 0.26
SRGAP2-209ENST00000604247 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
SRGAP2-209ENST00000604247 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
SRGAP2-209ENST00000604247 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
SRGAP2-209ENST00000604247 FYB1O15117 783 aa16.68■□□□□ 0.26
SRGAP2-209ENST00000604247 SEC24BO95487 1268 aa16.68■□□□□ 0.26
SRGAP2-209ENST00000604247 TSR2Q969E8 191 aaKnown RBP16.68■□□□□ 0.26
SRGAP2-209ENST00000604247 YTHDC2Q9H6S0 1430 aaKnown RBP16.67■□□□□ 0.26
SRGAP2-209ENST00000604247 POGKQ9P215 609 aa16.67■□□□□ 0.26
SRGAP2-209ENST00000604247 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
SRGAP2-209ENST00000604247 A2ML1A8K2U0 1454 aa16.66■□□□□ 0.26
SRGAP2-209ENST00000604247 ALKQ9UM73 1620 aa16.66■□□□□ 0.26
SRGAP2-209ENST00000604247 USP19O94966 1318 aa16.66■□□□□ 0.26
SRGAP2-209ENST00000604247 MAPK8IP3Q9UPT6 1336 aa16.66■□□□□ 0.26
SRGAP2-209ENST00000604247 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
SRGAP2-209ENST00000604247 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms