RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 KIF21BO75037 1637 aa6.17□□□□□ -1.42
LINC01109-201ENST00000603837 PPP4R3BQ5MIZ7 849 aa6.17□□□□□ -1.42
LINC01109-201ENST00000603837 CNGB1Q14028 1251 aaPredicted RBP6.16□□□□□ -1.42
LINC01109-201ENST00000603837 RIPOR2Q9Y4F9 1068 aa6.16□□□□□ -1.42
LINC01109-201ENST00000603837 OSBPP22059 807 aa6.16□□□□□ -1.42
LINC01109-201ENST00000603837 IRF5Q13568 498 aa6.16□□□□□ -1.42
LINC01109-201ENST00000603837 TYW1BQ6NUM6 668 aa6.16□□□□□ -1.42
LINC01109-201ENST00000603837 CCDC125Q86Z20 511 aa6.16□□□□□ -1.42
LINC01109-201ENST00000603837 ZDHHC16Q969W1 377 aa6.16□□□□□ -1.42
LINC01109-201ENST00000603837 EVI5LQ96CN4 794 aa6.16□□□□□ -1.42
LINC01109-201ENST00000603837 FBXW7Q969H0 707 aa6.15□□□□□ -1.42
LINC01109-201ENST00000603837 EXOC8Q8IYI6 725 aa6.15□□□□□ -1.43
LINC01109-201ENST00000603837 RBM33Q96EV2 1170 aaKnown RBP6.15□□□□□ -1.43
LINC01109-201ENST00000603837 HS3ST6Q96QI5 342 aa6.15□□□□□ -1.43
LINC01109-201ENST00000603837 MPNDQ8N594 471 aa6.14□□□□□ -1.43
LINC01109-201ENST00000603837 CLUAP1Q96AJ1 413 aa6.14□□□□□ -1.43
LINC01109-201ENST00000603837 PPP4R2Q9NY27 417 aa6.14□□□□□ -1.43
LINC01109-201ENST00000603837 CENPJQ9HC77 1338 aaPredicted RBP6.14□□□□□ -1.43
LINC01109-201ENST00000603837 DNMBPQ6XZF7 1577 aa6.14□□□□□ -1.43
LINC01109-201ENST00000603837 NESP48681 1621 aa6.14□□□□□ -1.43
LINC01109-201ENST00000603837 MAP3K7O43318 606 aa6.14□□□□□ -1.43
LINC01109-201ENST00000603837 SLC52A1Q9NWF4 448 aa6.14□□□□□ -1.43
LINC01109-201ENST00000603837 HSP90AB4PQ58FF6 505 aa6.14□□□□□ -1.43
LINC01109-201ENST00000603837 RBM26Q5T8P6 1007 aaKnown RBP6.14□□□□□ -1.43
LINC01109-201ENST00000603837 TNIKQ9UKE5 1360 aa6.14□□□□□ -1.43
LINC01109-201ENST00000603837 MARCH6O60337 910 aa6.13□□□□□ -1.43
LINC01109-201ENST00000603837 PEX14O75381 377 aa6.13□□□□□ -1.43
LINC01109-201ENST00000603837 EN1Q05925 392 aaPredicted RBP6.13□□□□□ -1.43
LINC01109-201ENST00000603837 RETREG2Q8NC44 543 aa6.13□□□□□ -1.43
LINC01109-201ENST00000603837 FRAT1Q92837 279 aaPredicted RBP6.13□□□□□ -1.43
LINC01109-201ENST00000603837 ADAM33Q9BZ11 813 aa6.13□□□□□ -1.43
LINC01109-201ENST00000603837 PNNQ9H307 717 aaKnown RBP6.13□□□□□ -1.43
LINC01109-201ENST00000603837 RRAGDQ9NQL2 400 aaPredicted RBP6.13□□□□□ -1.43
LINC01109-201ENST00000603837 UNCXA6NJT0 531 aa6.12□□□□□ -1.43
LINC01109-201ENST00000603837 PRIM1P49642 420 aaKnown RBP6.12□□□□□ -1.43
LINC01109-201ENST00000603837 POTEB3A0JP26 581 aa6.12□□□□□ -1.43
LINC01109-201ENST00000603837 POTEBQ6S5H4 581 aa6.12□□□□□ -1.43
LINC01109-201ENST00000603837 ZNF662Q6ZS27 426 aa6.12□□□□□ -1.43
LINC01109-201ENST00000603837 APBB1IPQ7Z5R6 666 aaPredicted RBP6.12□□□□□ -1.43
LINC01109-201ENST00000603837 TRIM52Q96A61 297 aa6.12□□□□□ -1.43
LINC01109-201ENST00000603837 BCL2L12Q9HB09 334 aa6.12□□□□□ -1.43
LINC01109-201ENST00000603837 POTEGQ6S5H5 508 aa6.12□□□□□ -1.43
LINC01109-201ENST00000603837 ZNF687Q8N1G0 1237 aa6.12□□□□□ -1.43
LINC01109-201ENST00000603837 RBM27Q9P2N5 1060 aaKnown RBP6.12□□□□□ -1.43
LINC01109-201ENST00000603837 FANCD2Q9BXW9 1451 aa6.11□□□□□ -1.43
LINC01109-201ENST00000603837 NUTM2FA1L443 756 aa6.11□□□□□ -1.43
LINC01109-201ENST00000603837 POTEMA6NI47 508 aa6.11□□□□□ -1.43
LINC01109-201ENST00000603837 C6orf132Q5T0Z8 1188 aa6.11□□□□□ -1.43
LINC01109-201ENST00000603837 PDCL3Q9H2J4 239 aa6.11□□□□□ -1.43
LINC01109-201ENST00000603837 CEP162Q5TB80 1403 aa6.11□□□□□ -1.43
LINC01109-201ENST00000603837 TSR1Q2NL82 804 aaKnown RBP6.11□□□□□ -1.43
LINC01109-201ENST00000603837 TARBP1Q13395 1621 aaKnown RBP6.11□□□□□ -1.43
LINC01109-201ENST00000603837 PTPREP23469 700 aa6.1□□□□□ -1.43
LINC01109-201ENST00000603837 PPP1R1BQ9UD71 204 aaPredicted RBP6.1□□□□□ -1.43
LINC01109-201ENST00000603837 BIVM-ERCC5R4GMW8 1640 aa6.1□□□□□ -1.43
LINC01109-201ENST00000603837 SPTY2D1Q68D10 685 aaPredicted RBP6.1□□□□□ -1.43
LINC01109-201ENST00000603837 SYNJ1O43426 1573 aa6.1□□□□□ -1.43
LINC01109-201ENST00000603837 ZNF830Q96NB3 372 aaPredicted RBP6.1□□□□□ -1.43
LINC01109-201ENST00000603837 KCNK17Q96T54 332 aa6.1□□□□□ -1.43
LINC01109-201ENST00000603837 FOXD4Q12950 439 aaPredicted RBP6.09□□□□□ -1.43
LINC01109-201ENST00000603837 GPIHBP1Q8IV16 184 aa6.09□□□□□ -1.43
LINC01109-201ENST00000603837 DCAF11Q8TEB1 546 aa6.09□□□□□ -1.43
LINC01109-201ENST00000603837 AXIN2Q9Y2T1 843 aa6.09□□□□□ -1.43
LINC01109-201ENST00000603837 RIMBP3CA6NJZ7 1639 aa6.09□□□□□ -1.43
LINC01109-201ENST00000603837 RIMBP3BA6NNM3 1639 aa6.09□□□□□ -1.43
LINC01109-201ENST00000603837 RIMBP3Q9UFD9 1639 aa6.09□□□□□ -1.43
LINC01109-201ENST00000603837 SIRT1Q96EB6 747 aa6.09□□□□□ -1.44
LINC01109-201ENST00000603837 CDHR5Q9HBB8 845 aa6.09□□□□□ -1.44
LINC01109-201ENST00000603837 CLASP1Q7Z460 1538 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 ARHGAP33O14559 1287 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 B4GALNT3Q6L9W6 998 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 PPME1Q9Y570 386 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 GOLGA3Q08378 1498 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 CARNS1A5YM72 827 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 PBX2P40425 430 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 PSEN2P49810 448 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 POTEEQ6S8J3 1075 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 SOGA1O94964 1423 aa6.08□□□□□ -1.44
LINC01109-201ENST00000603837 APPP05067 770 aa6.07□□□□□ -1.44
LINC01109-201ENST00000603837 HDAC5Q9UQL6 1122 aa6.07□□□□□ -1.44
LINC01109-201ENST00000603837 URB2Q14146 1524 aaKnown RBP6.07□□□□□ -1.44
LINC01109-201ENST00000603837 TOP2BQ02880 1626 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 RUSC2Q8N2Y8 1516 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 TPD52L2O43399 206 aaKnown RBP6.06□□□□□ -1.44
LINC01109-201ENST00000603837 POLD1P28340 1107 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 PTGDRQ13258 359 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 RGL3Q3MIN7 710 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 CERKQ8TCT0 537 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 VTI1AQ96AJ9 217 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 ZNF777Q9ULD5 760 aaPredicted RBP6.06□□□□□ -1.44
LINC01109-201ENST00000603837 EIF4G3O43432 1585 aaKnown RBP6.06□□□□□ -1.44
LINC01109-201ENST00000603837 PPP1R3GB7ZBB8 358 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 FCHSD2O94868 740 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 COL9A1P20849 921 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 CLCN1P35523 988 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 NFKBIBQ15653 356 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 ARMCX6Q7L4S7 300 aa6.06□□□□□ -1.44
LINC01109-201ENST00000603837 NPDC1Q9NQX5 325 aaPredicted RBP6.06□□□□□ -1.44
LINC01109-201ENST00000603837 ZHX1Q9UKY1 873 aaPredicted RBP6.06□□□□□ -1.44
LINC01109-201ENST00000603837 MAGI1Q96QZ7 1491 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms