RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 NBPF1Q3BBV0 1214 aa13.47□□□□□ -0.25
SQSTM1P1-201ENST00000603451 C14orf37Q86TY3 774 aa13.47□□□□□ -0.25
SQSTM1P1-201ENST00000603451 STK26Q9P289 416 aa13.47□□□□□ -0.25
SQSTM1P1-201ENST00000603451 ANKARQ7Z5J8 1434 aa13.47□□□□□ -0.25
SQSTM1P1-201ENST00000603451 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
SQSTM1P1-201ENST00000603451 PRAM1Q96QH2 718 aa13.46□□□□□ -0.25
SQSTM1P1-201ENST00000603451 CARD11Q9BXL7 1154 aa13.46□□□□□ -0.25
SQSTM1P1-201ENST00000603451 TRAK1Q9UPV9 953 aa13.46□□□□□ -0.25
SQSTM1P1-201ENST00000603451 KIF1AQ12756 1690 aa13.46□□□□□ -0.26
SQSTM1P1-201ENST00000603451 MST1RQ04912 1400 aa13.46□□□□□ -0.26
SQSTM1P1-201ENST00000603451 PLEKHH1Q9ULM0 1364 aa13.45□□□□□ -0.26
SQSTM1P1-201ENST00000603451 CENPJQ9HC77 1338 aaPredicted RBP13.45□□□□□ -0.26
SQSTM1P1-201ENST00000603451 TULP4Q9NRJ4 1543 aa13.45□□□□□ -0.26
SQSTM1P1-201ENST00000603451 ATF3P18847 181 aa13.45□□□□□ -0.26
SQSTM1P1-201ENST00000603451 FBXO41Q8TF61 875 aa13.45□□□□□ -0.26
SQSTM1P1-201ENST00000603451 POGKQ9P215 609 aa13.45□□□□□ -0.26
SQSTM1P1-201ENST00000603451 ROBO1Q9Y6N7 1651 aa13.44□□□□□ -0.26
SQSTM1P1-201ENST00000603451 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
SQSTM1P1-201ENST00000603451 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
SQSTM1P1-201ENST00000603451 C1orf167Q5SNV9 1468 aa13.42□□□□□ -0.26
SQSTM1P1-201ENST00000603451 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
SQSTM1P1-201ENST00000603451 NHSL1Q5SYE7 1610 aa13.42□□□□□ -0.26
SQSTM1P1-201ENST00000603451 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
SQSTM1P1-201ENST00000603451 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
SQSTM1P1-201ENST00000603451 USP47Q96K76 1375 aa13.41□□□□□ -0.26
SQSTM1P1-201ENST00000603451 RBM33Q96EV2 1170 aaKnown RBP13.4□□□□□ -0.26
SQSTM1P1-201ENST00000603451 SLAIN2Q9P270 581 aa13.4□□□□□ -0.26
SQSTM1P1-201ENST00000603451 ATP7BP35670 1465 aa13.4□□□□□ -0.26
SQSTM1P1-201ENST00000603451 WASLO00401 505 aaPredicted RBP13.38□□□□□ -0.27
SQSTM1P1-201ENST00000603451 EVC2Q86UK5 1308 aa13.38□□□□□ -0.27
SQSTM1P1-201ENST00000603451 ZEB1P37275 1124 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1P1-201ENST00000603451 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
SQSTM1P1-201ENST00000603451 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1P1-201ENST00000603451 MINK1Q8N4C8 1332 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1P1-201ENST00000603451 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
SQSTM1P1-201ENST00000603451 SAFB2Q14151 953 aaKnown RBP eCLIP13.36□□□□□ -0.27
SQSTM1P1-201ENST00000603451 ATAD2Q6PL18 1390 aa13.35□□□□□ -0.27
SQSTM1P1-201ENST00000603451 COL16A1Q07092 1604 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1P1-201ENST00000603451 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
SQSTM1P1-201ENST00000603451 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
SQSTM1P1-201ENST00000603451 BRINP3Q76B58 766 aa13.34□□□□□ -0.27
SQSTM1P1-201ENST00000603451 SHPRHQ149N8 1683 aa13.32□□□□□ -0.28
SQSTM1P1-201ENST00000603451 ST20-MTHFSA0A0A6YYL1 179 aa13.32□□□□□ -0.28
SQSTM1P1-201ENST00000603451 CDCA8Q53HL2 280 aa13.32□□□□□ -0.28
SQSTM1P1-201ENST00000603451 TESK2Q96S53 571 aa13.32□□□□□ -0.28
SQSTM1P1-201ENST00000603451 HIRIP3Q9BW71 556 aaPredicted RBP13.32□□□□□ -0.28
SQSTM1P1-201ENST00000603451 NPHP3Q7Z494 1330 aa13.32□□□□□ -0.28
SQSTM1P1-201ENST00000603451 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
SQSTM1P1-201ENST00000603451 PXDNQ92626 1479 aa13.31□□□□□ -0.28
SQSTM1P1-201ENST00000603451 PIP4K2BP78356 416 aa13.31□□□□□ -0.28
SQSTM1P1-201ENST00000603451 CDK19Q9BWU1 502 aa13.31□□□□□ -0.28
SQSTM1P1-201ENST00000603451 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
SQSTM1P1-201ENST00000603451 POLR3AO14802 1390 aaPredicted RBP13.31□□□□□ -0.28
SQSTM1P1-201ENST00000603451 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
SQSTM1P1-201ENST00000603451 TMF1P82094 1093 aa13.3□□□□□ -0.28
SQSTM1P1-201ENST00000603451 CCDC61Q9Y6R9 512 aa13.3□□□□□ -0.28
SQSTM1P1-201ENST00000603451 COL22A1Q8NFW1 1626 aaPredicted RBP13.29□□□□□ -0.28
SQSTM1P1-201ENST00000603451 SRPK2P78362 688 aaKnown RBP13.29□□□□□ -0.28
SQSTM1P1-201ENST00000603451 ESCO1Q5FWF5 840 aa13.29□□□□□ -0.28
SQSTM1P1-201ENST00000603451 NUDT16Q96DE0 195 aaKnown RBP13.29□□□□□ -0.28
SQSTM1P1-201ENST00000603451 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
SQSTM1P1-201ENST00000603451 TRPM3Q9HCF6 1732 aaPredicted RBP13.29□□□□□ -0.28
SQSTM1P1-201ENST00000603451 PRR36Q9H6K5 1346 aa13.29□□□□□ -0.28
SQSTM1P1-201ENST00000603451 PPIP5K1Q6PFW1 1433 aa13.29□□□□□ -0.28
SQSTM1P1-201ENST00000603451 MON2Q7Z3U7 1717 aa13.28□□□□□ -0.28
SQSTM1P1-201ENST00000603451 MYOM1P52179 1685 aa13.28□□□□□ -0.28
SQSTM1P1-201ENST00000603451 PLEKHG3A1L390 1219 aa13.27□□□□□ -0.29
SQSTM1P1-201ENST00000603451 ORAI2Q96SN7 254 aa13.27□□□□□ -0.29
SQSTM1P1-201ENST00000603451 SOS2Q07890 1332 aaPredicted RBP13.27□□□□□ -0.29
SQSTM1P1-201ENST00000603451 NRKQ7Z2Y5 1582 aa13.27□□□□□ -0.29
SQSTM1P1-201ENST00000603451 ALS2Q96Q42 1657 aa13.27□□□□□ -0.29
SQSTM1P1-201ENST00000603451 SBNO1A3KN83 1393 aa13.26□□□□□ -0.29
SQSTM1P1-201ENST00000603451 DISP3Q9P2K9 1392 aa13.26□□□□□ -0.29
SQSTM1P1-201ENST00000603451 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
SQSTM1P1-201ENST00000603451 JCADQ9P266 1359 aa13.25□□□□□ -0.29
SQSTM1P1-201ENST00000603451 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
SQSTM1P1-201ENST00000603451 CPSF1Q10570 1443 aaKnown RBP13.24□□□□□ -0.29
SQSTM1P1-201ENST00000603451 TNS3Q68CZ2 1445 aa13.24□□□□□ -0.29
SQSTM1P1-201ENST00000603451 ARHGEF10O15013 1369 aa13.24□□□□□ -0.29
SQSTM1P1-201ENST00000603451 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
SQSTM1P1-201ENST00000603451 PSME1Q06323 249 aa13.24□□□□□ -0.29
SQSTM1P1-201ENST00000603451 LRRC59Q96AG4 307 aaKnown RBP13.24□□□□□ -0.29
SQSTM1P1-201ENST00000603451 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
SQSTM1P1-201ENST00000603451 USP54Q70EL1 1684 aa13.24□□□□□ -0.29
SQSTM1P1-201ENST00000603451 HSPA1LP34931 641 aa13.23□□□□□ -0.29
SQSTM1P1-201ENST00000603451 ILDR1Q86SU0 546 aaPredicted RBP13.23□□□□□ -0.29
SQSTM1P1-201ENST00000603451 USP6P35125 1406 aa13.22□□□□□ -0.29
SQSTM1P1-201ENST00000603451 FOXO3O43524 673 aa13.22□□□□□ -0.29
SQSTM1P1-201ENST00000603451 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
SQSTM1P1-201ENST00000603451 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
SQSTM1P1-201ENST00000603451 ACEP12821 1306 aa13.21□□□□□ -0.29
SQSTM1P1-201ENST00000603451 SPATA31A6Q5VVP1 1343 aa13.21□□□□□ -0.29
SQSTM1P1-201ENST00000603451 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.29
SQSTM1P1-201ENST00000603451 CRYBG1Q9Y4K1 1723 aa13.21□□□□□ -0.3
SQSTM1P1-201ENST00000603451 CD163L1Q9NR16 1453 aa13.21□□□□□ -0.3
SQSTM1P1-201ENST00000603451 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
SQSTM1P1-201ENST00000603451 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
SQSTM1P1-201ENST00000603451 TERF2IPQ9NYB0 399 aa13.2□□□□□ -0.3
SQSTM1P1-201ENST00000603451 EDC4Q6P2E9 1401 aaKnown RBP13.2□□□□□ -0.3
SQSTM1P1-201ENST00000603451 SSH2Q76I76 1423 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms