RNA–Protein interactions for RNA: ENST00000602582.5

TRIM11-206, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 682 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-206ENST00000602582 CCDC7Q96M83 1385 aa21.12■□□□□ 0.97
TRIM11-206ENST00000602582 TRPM1Q7Z4N2 1603 aa21.12■□□□□ 0.97
TRIM11-206ENST00000602582 KDM2AQ9Y2K7 1162 aa21.12■□□□□ 0.97
TRIM11-206ENST00000602582 LRPPRCP42704 1394 aaKnown RBP21.11■□□□□ 0.97
TRIM11-206ENST00000602582 ATF3P18847 181 aa21.11■□□□□ 0.97
TRIM11-206ENST00000602582 C14orf93Q9H972 538 aaKnown RBP21.11■□□□□ 0.97
TRIM11-206ENST00000602582 CENPBP07199 599 aaPredicted RBP21.1■□□□□ 0.97
TRIM11-206ENST00000602582 TMEM132EQ6IEE7 984 aa21.09■□□□□ 0.97
TRIM11-206ENST00000602582 MST1RQ04912 1400 aa21.09■□□□□ 0.97
TRIM11-206ENST00000602582 YTHDC2Q9H6S0 1430 aaKnown RBP21.09■□□□□ 0.97
TRIM11-206ENST00000602582 PHLPP1O60346 1717 aa21.09■□□□□ 0.97
TRIM11-206ENST00000602582 CFAP70Q5T0N1 1121 aa21.08■□□□□ 0.97
TRIM11-206ENST00000602582 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.96
TRIM11-206ENST00000602582 ABCC11Q96J66 1382 aa21.08■□□□□ 0.96
TRIM11-206ENST00000602582 ADGRB1O14514 1584 aa21.07■□□□□ 0.96
TRIM11-206ENST00000602582 MED1Q15648 1581 aaPredicted RBP21.06■□□□□ 0.96
TRIM11-206ENST00000602582 C11orf95C9JLR9 678 aaPredicted RBP21.06■□□□□ 0.96
TRIM11-206ENST00000602582 CARD11Q9BXL7 1154 aa21.06■□□□□ 0.96
TRIM11-206ENST00000602582 STK26Q9P289 416 aa21.06■□□□□ 0.96
TRIM11-206ENST00000602582 ROCK2O75116 1388 aaKnown RBP21.06■□□□□ 0.96
TRIM11-206ENST00000602582 COL16A1Q07092 1604 aaPredicted RBP21.05■□□□□ 0.96
TRIM11-206ENST00000602582 AHDC1Q5TGY3 1603 aaPredicted RBP21.05■□□□□ 0.96
TRIM11-206ENST00000602582 CDC42BPGQ6DT37 1551 aa21.05■□□□□ 0.96
TRIM11-206ENST00000602582 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
TRIM11-206ENST00000602582 STAC3Q96MF2 364 aa21.04■□□□□ 0.96
TRIM11-206ENST00000602582 YTHDC1Q96MU7 727 aaKnown RBP21.04■□□□□ 0.96
TRIM11-206ENST00000602582 ANP32CO43423 234 aa21.03■□□□□ 0.96
TRIM11-206ENST00000602582 PLEKHH1Q9ULM0 1364 aa21.02■□□□□ 0.96
TRIM11-206ENST00000602582 BRINP3Q76B58 766 aa21.02■□□□□ 0.96
TRIM11-206ENST00000602582 NHSL1Q5SYE7 1610 aa21.02■□□□□ 0.96
TRIM11-206ENST00000602582 DLC1Q96QB1 1528 aa21.01■□□□□ 0.95
TRIM11-206ENST00000602582 WAPLQ7Z5K2 1190 aa21.01■□□□□ 0.95
TRIM11-206ENST00000602582 C1orf167Q5SNV9 1468 aa21.01■□□□□ 0.95
TRIM11-206ENST00000602582 CCER2I3L3R5 266 aa21■□□□□ 0.95
TRIM11-206ENST00000602582 KIAA1210Q9ULL0 1709 aa21■□□□□ 0.95
TRIM11-206ENST00000602582 SIRT1Q96EB6 747 aa20.98■□□□□ 0.95
TRIM11-206ENST00000602582 FMN2Q9NZ56 1722 aa20.97■□□□□ 0.95
TRIM11-206ENST00000602582 NBPF1Q3BBV0 1214 aa20.95■□□□□ 0.94
TRIM11-206ENST00000602582 ARHGEF28Q8N1W1 1705 aaKnown RBP20.95■□□□□ 0.94
TRIM11-206ENST00000602582 SHPRHQ149N8 1683 aa20.93■□□□□ 0.94
TRIM11-206ENST00000602582 ADGRB2O60241 1585 aa20.93■□□□□ 0.94
TRIM11-206ENST00000602582 ST20-MTHFSA0A0A6YYL1 179 aa20.92■□□□□ 0.94
TRIM11-206ENST00000602582 PRAM1Q96QH2 718 aa20.92■□□□□ 0.94
TRIM11-206ENST00000602582 JCADQ9P266 1359 aa20.92■□□□□ 0.94
TRIM11-206ENST00000602582 ORAI2Q96SN7 254 aa20.9■□□□□ 0.94
TRIM11-206ENST00000602582 TRAK1Q9UPV9 953 aa20.9■□□□□ 0.94
TRIM11-206ENST00000602582 RGPD8O14715 1765 aaPredicted RBP20.9■□□□□ 0.94
TRIM11-206ENST00000602582 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
TRIM11-206ENST00000602582 SAFB2Q14151 953 aaKnown RBP eCLIP20.88■□□□□ 0.93
TRIM11-206ENST00000602582 DDX17Q92841 729 aaKnown RBP20.88■□□□□ 0.93
TRIM11-206ENST00000602582 POGKQ9P215 609 aa20.86■□□□□ 0.93
TRIM11-206ENST00000602582 KIF1AQ12756 1690 aa20.86■□□□□ 0.93
TRIM11-206ENST00000602582 USP32Q8NFA0 1604 aa20.86■□□□□ 0.93
TRIM11-206ENST00000602582 NUTM2FA1L443 756 aa20.84■□□□□ 0.93
TRIM11-206ENST00000602582 LRP6O75581 1613 aa20.83■□□□□ 0.93
TRIM11-206ENST00000602582 ESCO1Q5FWF5 840 aa20.83■□□□□ 0.93
TRIM11-206ENST00000602582 TESK2Q96S53 571 aa20.82■□□□□ 0.92
TRIM11-206ENST00000602582 PXDNQ92626 1479 aa20.81■□□□□ 0.92
TRIM11-206ENST00000602582 SOS2Q07890 1332 aaPredicted RBP20.81■□□□□ 0.92
TRIM11-206ENST00000602582 SPATA31A6Q5VVP1 1343 aa20.81■□□□□ 0.92
TRIM11-206ENST00000602582 POLR3GLQ9BT43 218 aa20.81■□□□□ 0.92
TRIM11-206ENST00000602582 PRKRIP1Q9H875 184 aaPredicted RBP20.8■□□□□ 0.92
TRIM11-206ENST00000602582 MINK1Q8N4C8 1332 aaPredicted RBP20.79■□□□□ 0.92
TRIM11-206ENST00000602582 ANKARQ7Z5J8 1434 aa20.79■□□□□ 0.92
TRIM11-206ENST00000602582 LRRC59Q96AG4 307 aaKnown RBP20.79■□□□□ 0.92
TRIM11-206ENST00000602582 PNPLA6Q8IY17 1366 aa20.79■□□□□ 0.92
TRIM11-206ENST00000602582 NPHP3Q7Z494 1330 aa20.78■□□□□ 0.92
TRIM11-206ENST00000602582 TULP4Q9NRJ4 1543 aa20.78■□□□□ 0.92
TRIM11-206ENST00000602582 COL22A1Q8NFW1 1626 aaPredicted RBP20.77■□□□□ 0.92
TRIM11-206ENST00000602582 EIF3AQ14152 1382 aaKnown RBP20.76■□□□□ 0.91
TRIM11-206ENST00000602582 FOXO3O43524 673 aa20.76■□□□□ 0.91
TRIM11-206ENST00000602582 RGS17Q9UGC6 210 aaPredicted RBP20.76■□□□□ 0.91
TRIM11-206ENST00000602582 QRICH2Q9H0J4 1663 aa20.76■□□□□ 0.91
TRIM11-206ENST00000602582 WASLO00401 505 aaPredicted RBP20.74■□□□□ 0.91
TRIM11-206ENST00000602582 PRR36Q9H6K5 1346 aa20.74■□□□□ 0.91
TRIM11-206ENST00000602582 ITSN1Q15811 1721 aa20.73■□□□□ 0.91
TRIM11-206ENST00000602582 TMF1P82094 1093 aa20.73■□□□□ 0.91
TRIM11-206ENST00000602582 XPCQ01831 940 aaPredicted RBP20.73■□□□□ 0.91
TRIM11-206ENST00000602582 PHF8Q9UPP1 1060 aa20.73■□□□□ 0.91
TRIM11-206ENST00000602582 ATP7BP35670 1465 aa20.72■□□□□ 0.91
TRIM11-206ENST00000602582 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
TRIM11-206ENST00000602582 NUTM2BA6NNL0 878 aaPredicted RBP20.7■□□□□ 0.9
TRIM11-206ENST00000602582 NUTM2EB1AL46 878 aaPredicted RBP20.7■□□□□ 0.9
TRIM11-206ENST00000602582 NUTM2AQ8IVF1 878 aaPredicted RBP20.7■□□□□ 0.9
TRIM11-206ENST00000602582 CENPJQ9HC77 1338 aaPredicted RBP20.69■□□□□ 0.9
TRIM11-206ENST00000602582 TRPM3Q9HCF6 1732 aaPredicted RBP20.68■□□□□ 0.9
TRIM11-206ENST00000602582 MEX3CQ5U5Q3 659 aaKnown RBP20.67■□□□□ 0.9
TRIM11-206ENST00000602582 KRT28Q7Z3Y7 464 aa20.66■□□□□ 0.9
TRIM11-206ENST00000602582 PMFBP1Q8TBY8 1022 aa20.66■□□□□ 0.9
TRIM11-206ENST00000602582 MARF1Q9Y4F3 1742 aaKnown RBP20.65■□□□□ 0.9
TRIM11-206ENST00000602582 TNS3Q68CZ2 1445 aa20.65■□□□□ 0.9
TRIM11-206ENST00000602582 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
TRIM11-206ENST00000602582 SPATA31A3Q5VYP0 1347 aa20.65■□□□□ 0.9
TRIM11-206ENST00000602582 CDK19Q9BWU1 502 aa20.65■□□□□ 0.9
TRIM11-206ENST00000602582 SBNO1A3KN83 1393 aa20.64■□□□□ 0.89
TRIM11-206ENST00000602582 CCDC184Q52MB2 194 aa20.64■□□□□ 0.89
TRIM11-206ENST00000602582 POTEAQ6S8J7 498 aa20.64■□□□□ 0.89
TRIM11-206ENST00000602582 GTF3C3Q9Y5Q9 886 aa20.64■□□□□ 0.89
TRIM11-206ENST00000602582 SBNO2Q9Y2G9 1366 aa20.63■□□□□ 0.89
TRIM11-206ENST00000602582 CDCA8Q53HL2 280 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms