RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 MYOM2P54296 1465 aa15.26■□□□□ 0.03
HIF3A-219ENST00000600879 LAMC1P11047 1609 aa15.25■□□□□ 0.03
HIF3A-219ENST00000600879 ESCO1Q5FWF5 840 aa15.25■□□□□ 0.03
HIF3A-219ENST00000600879 CCDC125Q86Z20 511 aa15.25■□□□□ 0.03
HIF3A-219ENST00000600879 PSDA5PKW4 1024 aaPredicted RBP15.24■□□□□ 0.03
HIF3A-219ENST00000600879 FOXO3O43524 673 aa15.24■□□□□ 0.03
HIF3A-219ENST00000600879 CLTCL1P53675 1640 aa15.24■□□□□ 0.03
HIF3A-219ENST00000600879 COL22A1Q8NFW1 1626 aaPredicted RBP15.23■□□□□ 0.03
HIF3A-219ENST00000600879 RALGAPBQ86X10 1494 aa15.22■□□□□ 0.03
HIF3A-219ENST00000600879 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
HIF3A-219ENST00000600879 BLMP54132 1417 aaPredicted RBP15.22■□□□□ 0.03
HIF3A-219ENST00000600879 PXDNQ92626 1479 aa15.21■□□□□ 0.03
HIF3A-219ENST00000600879 GLI3P10071 1580 aa15.21■□□□□ 0.03
HIF3A-219ENST00000600879 UNC5CLQ8IV45 518 aa15.19■□□□□ 0.02
HIF3A-219ENST00000600879 NPHP3Q7Z494 1330 aa15.18■□□□□ 0.02
HIF3A-219ENST00000600879 SEPT12Q8IYM1 358 aa15.18■□□□□ 0.02
HIF3A-219ENST00000600879 SF3B2Q13435 895 aaKnown RBP15.17■□□□□ 0.02
HIF3A-219ENST00000600879 STK26Q9P289 416 aa15.17■□□□□ 0.02
HIF3A-219ENST00000600879 BRWD3Q6RI45 1802 aa15.16■□□□□ 0.02
HIF3A-219ENST00000600879 WAPLQ7Z5K2 1190 aa15.16■□□□□ 0.02
HIF3A-219ENST00000600879 CABLES1Q8TDN4 633 aa15.16■□□□□ 0.02
HIF3A-219ENST00000600879 CCDC9Q9Y3X0 531 aaKnown RBP15.16■□□□□ 0.02
HIF3A-219ENST00000600879 MARF1Q9Y4F3 1742 aaKnown RBP15.16■□□□□ 0.02
HIF3A-219ENST00000600879 KIF1BO60333 1816 aa15.15■□□□□ 0.02
HIF3A-219ENST00000600879 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-219ENST00000600879 SLIT2O94813 1529 aa15.14■□□□□ 0.01
HIF3A-219ENST00000600879 HFM1A2PYH4 1435 aa15.14■□□□□ 0.01
HIF3A-219ENST00000600879 A0A0G2JS52 829 aa15.13■□□□□ 0.01
HIF3A-219ENST00000600879 HRCP23327 699 aa15.13■□□□□ 0.01
HIF3A-219ENST00000600879 MYT1Q01538 1121 aa15.13■□□□□ 0.01
HIF3A-219ENST00000600879 NAIPQ13075 1403 aa15.13■□□□□ 0.01
HIF3A-219ENST00000600879 LRP5O75197 1615 aa15.13■□□□□ 0.01
HIF3A-219ENST00000600879 PLEKHH1Q9ULM0 1364 aa15.12■□□□□ 0.01
HIF3A-219ENST00000600879 HAP1P54257 671 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-219ENST00000600879 FAM182BQ5T319 152 aa15.12■□□□□ 0.01
HIF3A-219ENST00000600879 CDC42BPGQ6DT37 1551 aa15.11■□□□□ 0.01
HIF3A-219ENST00000600879 KRT27Q7Z3Y8 459 aa15.11■□□□□ 0.01
HIF3A-219ENST00000600879 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.11■□□□□ 0.01
HIF3A-219ENST00000600879 SPATA31A3Q5VYP0 1347 aa15.11■□□□□ 0.01
HIF3A-219ENST00000600879 PRAG1Q86YV5 1406 aa15.09■□□□□ 0.01
HIF3A-219ENST00000600879 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
HIF3A-219ENST00000600879 R3HDM1Q15032 1099 aaKnown RBP15.09■□□□□ 0.01
HIF3A-219ENST00000600879 VPS72Q15906 364 aa15.09■□□□□ 0.01
HIF3A-219ENST00000600879 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
HIF3A-219ENST00000600879 KRT28Q7Z3Y7 464 aa15.09■□□□□ 0.01
HIF3A-219ENST00000600879 USP32Q8NFA0 1604 aa15.09■□□□□ 0.01
HIF3A-219ENST00000600879 TMEM132EQ6IEE7 984 aa15.08■□□□□ 0
HIF3A-219ENST00000600879 ADGRF5Q8IZF2 1346 aa15.08■□□□□ 0
HIF3A-219ENST00000600879 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
HIF3A-219ENST00000600879 FAM98CQ17RN3 349 aaKnown RBP15.07■□□□□ 0
HIF3A-219ENST00000600879 RPGRIP1LQ68CZ1 1315 aa15.07■□□□□ 0
HIF3A-219ENST00000600879 PPLO60437 1756 aa15.06■□□□□ 0
HIF3A-219ENST00000600879 BAG6P46379 1132 aa15.06■□□□□ 0
HIF3A-219ENST00000600879 FAM83GA6ND36 823 aa15.05■□□□□ -0
HIF3A-219ENST00000600879 PLCH1Q4KWH8 1693 aa15.05■□□□□ -0
HIF3A-219ENST00000600879 ONECUT3O60422 494 aaPredicted RBP15.04■□□□□ -0
HIF3A-219ENST00000600879 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
HIF3A-219ENST00000600879 CCDC144AA2RUR9 1427 aa15.03■□□□□ -0
HIF3A-219ENST00000600879 RGL3Q3MIN7 710 aa15.03■□□□□ -0
HIF3A-219ENST00000600879 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
HIF3A-219ENST00000600879 RRBP1Q9P2E9 1410 aaKnown RBP15.01□□□□□ -0.01
HIF3A-219ENST00000600879 FMN2Q9NZ56 1722 aa15.01□□□□□ -0.01
HIF3A-219ENST00000600879 SAFB2Q14151 953 aaKnown RBP eCLIP15.01□□□□□ -0.01
HIF3A-219ENST00000600879 PHF8Q9UPP1 1060 aa15.01□□□□□ -0.01
HIF3A-219ENST00000600879 EZH2Q15910 746 aaKnown RBP15□□□□□ -0.01
HIF3A-219ENST00000600879 BTG4Q9NY30 223 aa15□□□□□ -0.01
HIF3A-219ENST00000600879 TECPR2O15040 1411 aa15□□□□□ -0.01
HIF3A-219ENST00000600879 PMFBP1Q8TBY8 1022 aa14.99□□□□□ -0.01
HIF3A-219ENST00000600879 KIF1AQ12756 1690 aa14.99□□□□□ -0.01
HIF3A-219ENST00000600879 ABCA3Q99758 1704 aa14.98□□□□□ -0.01
HIF3A-219ENST00000600879 PSME1Q06323 249 aa14.98□□□□□ -0.01
HIF3A-219ENST00000600879 RGPD8O14715 1765 aaPredicted RBP14.98□□□□□ -0.01
HIF3A-219ENST00000600879 YY1P25490 414 aa14.97□□□□□ -0.01
HIF3A-219ENST00000600879 NWD2Q9ULI1 1742 aa14.97□□□□□ -0.01
HIF3A-219ENST00000600879 ABCC11Q96J66 1382 aa14.97□□□□□ -0.01
HIF3A-219ENST00000600879 KNDC1Q76NI1 1749 aa14.95□□□□□ -0.02
HIF3A-219ENST00000600879 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
HIF3A-219ENST00000600879 YTHDC2Q9H6S0 1430 aaKnown RBP14.95□□□□□ -0.02
HIF3A-219ENST00000600879 TRIM37O94972 964 aa14.95□□□□□ -0.02
HIF3A-219ENST00000600879 SBNO1A3KN83 1393 aa14.94□□□□□ -0.02
HIF3A-219ENST00000600879 IFT172Q9UG01 1749 aa14.94□□□□□ -0.02
HIF3A-219ENST00000600879 ARHGEF10O15013 1369 aa14.93□□□□□ -0.02
HIF3A-219ENST00000600879 ANKRD30BQ9BXX2 1392 aa14.93□□□□□ -0.02
HIF3A-219ENST00000600879 NRXN1Q9ULB1 1477 aa14.93□□□□□ -0.02
HIF3A-219ENST00000600879 PIK3C2GO75747 1445 aa14.92□□□□□ -0.02
HIF3A-219ENST00000600879 SPATA31E1Q6ZUB1 1445 aa14.92□□□□□ -0.02
HIF3A-219ENST00000600879 RGPD1P0DJD0 1748 aa14.92□□□□□ -0.02
HIF3A-219ENST00000600879 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
HIF3A-219ENST00000600879 PRAM1Q96QH2 718 aa14.92□□□□□ -0.02
HIF3A-219ENST00000600879 CAMKK2Q96RR4 588 aa14.92□□□□□ -0.02
HIF3A-219ENST00000600879 SPATA31A5Q5VU36 1347 aa14.92□□□□□ -0.02
HIF3A-219ENST00000600879 SPATA31A7Q8IWB4 1347 aa14.92□□□□□ -0.02
HIF3A-219ENST00000600879 APBA3O96018 575 aa14.9□□□□□ -0.02
HIF3A-219ENST00000600879 HIRIP3Q9BW71 556 aaPredicted RBP14.9□□□□□ -0.02
HIF3A-219ENST00000600879 CHRNA2Q15822 529 aa14.89□□□□□ -0.03
HIF3A-219ENST00000600879 CFAP70Q5T0N1 1121 aa14.89□□□□□ -0.03
HIF3A-219ENST00000600879 USP35Q9P2H5 1018 aa14.89□□□□□ -0.03
HIF3A-219ENST00000600879 DISP2A7MBM2 1401 aa14.89□□□□□ -0.03
HIF3A-219ENST00000600879 THSD7AQ9UPZ6 1657 aa14.88□□□□□ -0.03
HIF3A-219ENST00000600879 STRN4Q9NRL3 753 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms