RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 SENP3Q9H4L4 574 aaPredicted RBP27.21■■□□□ 1.95
PNKP-214ENST00000600573 ATAD2Q6PL18 1390 aa27.2■■□□□ 1.94
PNKP-214ENST00000600573 TULP4Q9NRJ4 1543 aa27.19■■□□□ 1.94
PNKP-214ENST00000600573 DIP2AQ14689 1571 aa27.19■■□□□ 1.94
PNKP-214ENST00000600573 KNDC1Q76NI1 1749 aa27.18■■□□□ 1.94
PNKP-214ENST00000600573 BRD4O60885 1362 aaPredicted RBP27.18■■□□□ 1.94
PNKP-214ENST00000600573 ZNF142P52746 1687 aaPredicted RBP27.18■■□□□ 1.94
PNKP-214ENST00000600573 CCDC184Q52MB2 194 aa27.18■■□□□ 1.94
PNKP-214ENST00000600573 ANKLE2Q86XL3 938 aa27.17■■□□□ 1.94
PNKP-214ENST00000600573 KDM4FA0A1W2PPD8 638 aa27.16■■□□□ 1.94
PNKP-214ENST00000600573 AMER1Q5JTC6 1135 aaPredicted RBP27.16■■□□□ 1.94
PNKP-214ENST00000600573 NLRP13Q86W25 1043 aa27.16■■□□□ 1.94
PNKP-214ENST00000600573 SAFB2Q14151 953 aaKnown RBP eCLIP27.16■■□□□ 1.94
PNKP-214ENST00000600573 SRPK2P78362 688 aaKnown RBP27.15■■□□□ 1.94
PNKP-214ENST00000600573 TMC1Q8TDI8 760 aa27.15■■□□□ 1.94
PNKP-214ENST00000600573 MINK1Q8N4C8 1332 aaPredicted RBP27.14■■□□□ 1.94
PNKP-214ENST00000600573 CPS1P31327 1500 aa27.14■■□□□ 1.93
PNKP-214ENST00000600573 PIK3R4Q99570 1358 aa27.14■■□□□ 1.93
PNKP-214ENST00000600573 CC2D1BQ5T0F9 858 aaKnown RBP27.12■■□□□ 1.93
PNKP-214ENST00000600573 WAPLQ7Z5K2 1190 aa27.12■■□□□ 1.93
PNKP-214ENST00000600573 SLC12A5Q9H2X9 1139 aa27.12■■□□□ 1.93
PNKP-214ENST00000600573 CABP2Q9NPB3 220 aa27.12■■□□□ 1.93
PNKP-214ENST00000600573 ANKRD36BQ8N2N9 1353 aa27.11■■□□□ 1.93
PNKP-214ENST00000600573 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
PNKP-214ENST00000600573 CDK19Q9BWU1 502 aa27.11■■□□□ 1.93
PNKP-214ENST00000600573 HNRNPUQ00839 825 aaKnown RBP eCLIP27.09■■□□□ 1.93
PNKP-214ENST00000600573 CNGB1Q14028 1251 aaPredicted RBP27.09■■□□□ 1.93
PNKP-214ENST00000600573 SLC26A8Q96RN1 970 aa27.08■■□□□ 1.93
PNKP-214ENST00000600573 CARD14Q9BXL6 1004 aa27.08■■□□□ 1.93
PNKP-214ENST00000600573 TERF2IPQ9NYB0 399 aa27.07■■□□□ 1.92
PNKP-214ENST00000600573 PLEKHH1Q9ULM0 1364 aa27.07■■□□□ 1.92
PNKP-214ENST00000600573 WASLO00401 505 aaPredicted RBP27.06■■□□□ 1.92
PNKP-214ENST00000600573 FAM9BQ8IZU0 186 aa27.05■■□□□ 1.92
PNKP-214ENST00000600573 AMOTL2Q9Y2J4 779 aa27.05■■□□□ 1.92
PNKP-214ENST00000600573 PTCH1Q13635 1447 aa27.04■■□□□ 1.92
PNKP-214ENST00000600573 PNISRQ8TF01 805 aaKnown RBP27.04■■□□□ 1.92
PNKP-214ENST00000600573 ROBO2Q9HCK4 1378 aa27.03■■□□□ 1.92
PNKP-214ENST00000600573 CGNL1Q0VF96 1302 aa27.02■■□□□ 1.92
PNKP-214ENST00000600573 NSD2O96028 1365 aa27.02■■□□□ 1.92
PNKP-214ENST00000600573 NSD3Q9BZ95 1437 aa27.01■■□□□ 1.92
PNKP-214ENST00000600573 PTPRUQ92729 1446 aa27.01■■□□□ 1.91
PNKP-214ENST00000600573 HDGFL2Q7Z4V5 671 aaPredicted RBP27.01■■□□□ 1.91
PNKP-214ENST00000600573 USP32Q8NFA0 1604 aa27■■□□□ 1.91
PNKP-214ENST00000600573 PPP2R1AP30153 589 aa26.98■■□□□ 1.91
PNKP-214ENST00000600573 INSRP06213 1382 aa26.97■■□□□ 1.91
PNKP-214ENST00000600573 ADGRB2O60241 1585 aa26.96■■□□□ 1.91
PNKP-214ENST00000600573 ATP7BP35670 1465 aa26.95■■□□□ 1.91
PNKP-214ENST00000600573 ZBED9Q6R2W3 1325 aa26.95■■□□□ 1.9
PNKP-214ENST00000600573 CABP1Q9NZU7 370 aa26.94■■□□□ 1.9
PNKP-214ENST00000600573 CCDC61Q9Y6R9 512 aa26.94■■□□□ 1.9
PNKP-214ENST00000600573 A0A1W2PP64 1363 aa26.93■■□□□ 1.9
PNKP-214ENST00000600573 NPHP4O75161 1426 aaPredicted RBP26.93■■□□□ 1.9
PNKP-214ENST00000600573 NUDT16Q96DE0 195 aaKnown RBP26.92■■□□□ 1.9
PNKP-214ENST00000600573 MORC1Q86VD1 984 aa26.91■■□□□ 1.9
PNKP-214ENST00000600573 XRN1Q8IZH2 1706 aaKnown RBP26.9■■□□□ 1.9
PNKP-214ENST00000600573 CD163L1Q9NR16 1453 aa26.89■■□□□ 1.9
PNKP-214ENST00000600573 ZNF692Q9BU19 519 aaPredicted RBP26.89■■□□□ 1.9
PNKP-214ENST00000600573 PPIP5K1Q6PFW1 1433 aa26.87■■□□□ 1.89
PNKP-214ENST00000600573 KCNA6P17658 529 aa26.86■■□□□ 1.89
PNKP-214ENST00000600573 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.85■■□□□ 1.89
PNKP-214ENST00000600573 CPSF1Q10570 1443 aaKnown RBP26.85■■□□□ 1.89
PNKP-214ENST00000600573 PLEKHG3A1L390 1219 aa26.83■■□□□ 1.88
PNKP-214ENST00000600573 CHD2O14647 1828 aaKnown RBP26.81■■□□□ 1.88
PNKP-214ENST00000600573 EDC4Q6P2E9 1401 aaKnown RBP26.8■■□□□ 1.88
PNKP-214ENST00000600573 POLR3AO14802 1390 aaPredicted RBP26.8■■□□□ 1.88
PNKP-214ENST00000600573 NCKAP5LQ9HCH0 1330 aa26.8■■□□□ 1.88
PNKP-214ENST00000600573 FYB1O15117 783 aa26.79■■□□□ 1.88
PNKP-214ENST00000600573 LMTK3Q96Q04 1460 aa26.79■■□□□ 1.88
PNKP-214ENST00000600573 WDR43Q15061 677 aaKnown RBP eCLIP26.79■■□□□ 1.88
PNKP-214ENST00000600573 PRR36Q9H6K5 1346 aa26.78■■□□□ 1.88
PNKP-214ENST00000600573 CDC42BPGQ6DT37 1551 aa26.78■■□□□ 1.88
PNKP-214ENST00000600573 ANKARQ7Z5J8 1434 aa26.78■■□□□ 1.88
PNKP-214ENST00000600573 BLMP54132 1417 aaPredicted RBP26.75■■□□□ 1.87
PNKP-214ENST00000600573 CFAP53Q96M91 514 aa26.75■■□□□ 1.87
PNKP-214ENST00000600573 NEFLP07196 543 aa26.73■■□□□ 1.87
PNKP-214ENST00000600573 GGNBP2Q9H3C7 697 aa26.72■■□□□ 1.87
PNKP-214ENST00000600573 SUPT16HQ9Y5B9 1047 aaKnown RBP26.72■■□□□ 1.87
PNKP-214ENST00000600573 ANKRD26Q9UPS8 1709 aa26.71■■□□□ 1.87
PNKP-214ENST00000600573 TOPAZ1Q8N9V7 1692 aa26.7■■□□□ 1.87
PNKP-214ENST00000600573 NWD1Q149M9 1564 aa26.7■■□□□ 1.87
PNKP-214ENST00000600573 ADAMTS8Q9UP79 889 aa26.69■■□□□ 1.86
PNKP-214ENST00000600573 SMG6Q86US8 1419 aaKnown RBP26.69■■□□□ 1.86
PNKP-214ENST00000600573 HSPA2P54652 639 aa26.68■■□□□ 1.86
PNKP-214ENST00000600573 ACEP12821 1306 aa26.68■■□□□ 1.86
PNKP-214ENST00000600573 MTHFSP49914 203 aa26.68■■□□□ 1.86
PNKP-214ENST00000600573 AKAP12Q02952 1782 aa26.66■■□□□ 1.86
PNKP-214ENST00000600573 ADGRL3Q9HAR2 1447 aa26.66■■□□□ 1.86
PNKP-214ENST00000600573 TNNT2P45379 298 aaPredicted RBP26.66■■□□□ 1.86
PNKP-214ENST00000600573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.66■■□□□ 1.86
PNKP-214ENST00000600573 ITSN1Q15811 1721 aa26.66■■□□□ 1.86
PNKP-214ENST00000600573 MON2Q7Z3U7 1717 aa26.66■■□□□ 1.86
PNKP-214ENST00000600573 NKTRP30414 1462 aaKnown RBP26.65■■□□□ 1.86
PNKP-214ENST00000600573 KIF20BQ96Q89 1820 aa26.65■■□□□ 1.86
PNKP-214ENST00000600573 NGEFQ8N5V2 710 aa26.65■■□□□ 1.86
PNKP-214ENST00000600573 PDE3BQ13370 1112 aa26.64■■□□□ 1.85
PNKP-214ENST00000600573 COG3Q96JB2 828 aa26.63■■□□□ 1.85
PNKP-214ENST00000600573 TTC21AQ8NDW8 1320 aa26.63■■□□□ 1.85
PNKP-214ENST00000600573 NCOA3Q9Y6Q9 1424 aa26.63■■□□□ 1.85
PNKP-214ENST00000600573 TTC21BQ7Z4L5 1316 aa26.62■■□□□ 1.85
PNKP-214ENST00000600573 USP6P35125 1406 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms