RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 ZNF598Q86UK7 904 aaKnown RBP13.04□□□□□ -0.32
LINC00343-207ENST00000599179 SLC6A16Q9GZN6 736 aa13.04□□□□□ -0.32
LINC00343-207ENST00000599179 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
LINC00343-207ENST00000599179 PRR20EP86478 221 aa13.02□□□□□ -0.33
LINC00343-207ENST00000599179 PRR20CP86479 221 aa13.02□□□□□ -0.33
LINC00343-207ENST00000599179 PRR20DP86480 221 aa13.02□□□□□ -0.33
LINC00343-207ENST00000599179 PRR20BP86481 221 aa13.02□□□□□ -0.33
LINC00343-207ENST00000599179 PRR20AP86496 221 aa13.02□□□□□ -0.33
LINC00343-207ENST00000599179 SCUBE3Q8IX30 993 aa13.02□□□□□ -0.33
LINC00343-207ENST00000599179 EMID1Q96A84 441 aaPredicted RBP13.01□□□□□ -0.33
LINC00343-207ENST00000599179 SOGA1O94964 1423 aa13.01□□□□□ -0.33
LINC00343-207ENST00000599179 GPR37O15354 613 aa13□□□□□ -0.33
LINC00343-207ENST00000599179 TRIM67Q6ZTA4 783 aa13□□□□□ -0.33
LINC00343-207ENST00000599179 RDH13Q8NBN7 331 aa13□□□□□ -0.33
LINC00343-207ENST00000599179 MAGI1Q96QZ7 1491 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-207ENST00000599179 PPEF1O14829 653 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-207ENST00000599179 SULF1Q8IWU6 871 aa12.99□□□□□ -0.33
LINC00343-207ENST00000599179 SPSB2Q99619 263 aa12.99□□□□□ -0.33
LINC00343-207ENST00000599179 ZNF697Q5TEC3 545 aa12.98□□□□□ -0.33
LINC00343-207ENST00000599179 SYNJ2O15056 1496 aa12.97□□□□□ -0.33
LINC00343-207ENST00000599179 FECHP22830 423 aa12.97□□□□□ -0.33
LINC00343-207ENST00000599179 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
LINC00343-207ENST00000599179 DGAT1O75907 488 aa12.96□□□□□ -0.33
LINC00343-207ENST00000599179 PUS10Q3MIT2 529 aaKnown RBP12.96□□□□□ -0.33
LINC00343-207ENST00000599179 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
LINC00343-207ENST00000599179 GPIHBP1Q8IV16 184 aa12.95□□□□□ -0.34
LINC00343-207ENST00000599179 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
LINC00343-207ENST00000599179 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
LINC00343-207ENST00000599179 ZNF787Q6DD87 383 aa12.94□□□□□ -0.34
LINC00343-207ENST00000599179 ATP6V1AP38606 617 aa12.93□□□□□ -0.34
LINC00343-207ENST00000599179 MORN1Q5T089 497 aa12.93□□□□□ -0.34
LINC00343-207ENST00000599179 ERCC6L2Q5T890 1561 aa12.92□□□□□ -0.34
LINC00343-207ENST00000599179 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
LINC00343-207ENST00000599179 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
LINC00343-207ENST00000599179 FUT2Q10981 343 aa12.91□□□□□ -0.34
LINC00343-207ENST00000599179 GDF9O60383 454 aa12.9□□□□□ -0.34
LINC00343-207ENST00000599179 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-207ENST00000599179 GCGRP47871 477 aa12.9□□□□□ -0.34
LINC00343-207ENST00000599179 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-207ENST00000599179 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-207ENST00000599179 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
LINC00343-207ENST00000599179 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
LINC00343-207ENST00000599179 RPIAP49247 311 aa12.88□□□□□ -0.35
LINC00343-207ENST00000599179 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
LINC00343-207ENST00000599179 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
LINC00343-207ENST00000599179 MYT1Q01538 1121 aa12.87□□□□□ -0.35
LINC00343-207ENST00000599179 THAP11Q96EK4 314 aa12.87□□□□□ -0.35
LINC00343-207ENST00000599179 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
LINC00343-207ENST00000599179 TNFRSF10AO00220 468 aa12.86□□□□□ -0.35
LINC00343-207ENST00000599179 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
LINC00343-207ENST00000599179 SLC27A5Q9Y2P5 690 aa12.85□□□□□ -0.35
LINC00343-207ENST00000599179 PHOX2BQ99453 314 aa12.84□□□□□ -0.35
LINC00343-207ENST00000599179 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
LINC00343-207ENST00000599179 FCF1Q9Y324 198 aaKnown RBP12.83□□□□□ -0.36
LINC00343-207ENST00000599179 FAM69CQ0P6D2 419 aa12.82□□□□□ -0.36
LINC00343-207ENST00000599179 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
LINC00343-207ENST00000599179 MAP2K5Q13163 448 aa12.81□□□□□ -0.36
LINC00343-207ENST00000599179 MSS51Q4VC12 460 aa12.81□□□□□ -0.36
LINC00343-207ENST00000599179 CUX1P39880 1505 aa12.81□□□□□ -0.36
LINC00343-207ENST00000599179 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
LINC00343-207ENST00000599179 Q3C1V9 767 aa12.8□□□□□ -0.36
LINC00343-207ENST00000599179 BRICD5Q6PL45 260 aa12.8□□□□□ -0.36
LINC00343-207ENST00000599179 FAM160A2Q8N612 972 aaPredicted RBP12.8□□□□□ -0.36
LINC00343-207ENST00000599179 PKD2L1Q9P0L9 805 aa12.79□□□□□ -0.36
LINC00343-207ENST00000599179 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
LINC00343-207ENST00000599179 FOXC1Q12948 553 aa12.78□□□□□ -0.36
LINC00343-207ENST00000599179 NUP160Q12769 1436 aa12.78□□□□□ -0.36
LINC00343-207ENST00000599179 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
LINC00343-207ENST00000599179 KDM2AQ9Y2K7 1162 aa12.77□□□□□ -0.37
LINC00343-207ENST00000599179 ZBTB24O43167 697 aaPredicted RBP12.76□□□□□ -0.37
LINC00343-207ENST00000599179 PBRM1Q86U86 1689 aa12.76□□□□□ -0.37
LINC00343-207ENST00000599179 CD46P15529 392 aa12.75□□□□□ -0.37
LINC00343-207ENST00000599179 ZNF775Q96BV0 537 aaPredicted RBP12.75□□□□□ -0.37
LINC00343-207ENST00000599179 PRDM9Q9NQV7 894 aa12.74□□□□□ -0.37
LINC00343-207ENST00000599179 RNF19BQ6ZMZ0 732 aa12.73□□□□□ -0.37
LINC00343-207ENST00000599179 KDM6BO15054 1643 aa12.73□□□□□ -0.37
LINC00343-207ENST00000599179 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
LINC00343-207ENST00000599179 IRF6O14896 467 aa12.72□□□□□ -0.37
LINC00343-207ENST00000599179 USP46P62068 366 aa12.72□□□□□ -0.37
LINC00343-207ENST00000599179 CYP4X1Q8N118 509 aa12.72□□□□□ -0.37
LINC00343-207ENST00000599179 CRIPAKQ8N1N5 446 aa12.72□□□□□ -0.37
LINC00343-207ENST00000599179 ABCA5Q8WWZ7 1642 aa12.72□□□□□ -0.37
LINC00343-207ENST00000599179 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
LINC00343-207ENST00000599179 PRG4Q92954 1404 aaPredicted RBP12.71□□□□□ -0.37
LINC00343-207ENST00000599179 SHROOM2Q13796 1616 aa12.71□□□□□ -0.37
LINC00343-207ENST00000599179 KDM4AO75164 1064 aa12.71□□□□□ -0.37
LINC00343-207ENST00000599179 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
LINC00343-207ENST00000599179 AAASQ9NRG9 546 aa12.71□□□□□ -0.37
LINC00343-207ENST00000599179 TOR4AQ9NXH8 423 aa12.71□□□□□ -0.37
LINC00343-207ENST00000599179 DIP2BQ9P265 1576 aa12.7□□□□□ -0.38
LINC00343-207ENST00000599179 AVPP01185 164 aa12.69□□□□□ -0.38
LINC00343-207ENST00000599179 MMP16P51512 607 aa12.69□□□□□ -0.38
LINC00343-207ENST00000599179 ADAMTS12P58397 1594 aa12.69□□□□□ -0.38
LINC00343-207ENST00000599179 MAPKBP1O60336 1514 aa12.68□□□□□ -0.38
LINC00343-207ENST00000599179 CTC1Q2NKJ3 1217 aa12.68□□□□□ -0.38
LINC00343-207ENST00000599179 USB1Q9BQ65 265 aaKnown RBP12.68□□□□□ -0.38
LINC00343-207ENST00000599179 ST8SIA5O15466 376 aa12.67□□□□□ -0.38
LINC00343-207ENST00000599179 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
LINC00343-207ENST00000599179 ADGRL1O94910 1474 aa12.66□□□□□ -0.38
LINC00343-207ENST00000599179 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms