RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.15
SMG9-207ENST00000598860 RAPGEF3O95398 923 aa16.01■□□□□ 0.15
SMG9-207ENST00000598860 PTGDRQ13258 359 aa16.01■□□□□ 0.15
SMG9-207ENST00000598860 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
SMG9-207ENST00000598860 FANCAO15360 1455 aa15.99■□□□□ 0.15
SMG9-207ENST00000598860 FCHSD2O94868 740 aa15.99■□□□□ 0.15
SMG9-207ENST00000598860 CERKQ8TCT0 537 aa15.99■□□□□ 0.15
SMG9-207ENST00000598860 PLCH2O75038 1416 aa15.99■□□□□ 0.15
SMG9-207ENST00000598860 AKNAQ7Z591 1439 aa15.99■□□□□ 0.15
SMG9-207ENST00000598860 TTC37Q6PGP7 1564 aa15.99■□□□□ 0.15
SMG9-207ENST00000598860 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
SMG9-207ENST00000598860 KIF14Q15058 1648 aa15.98■□□□□ 0.15
SMG9-207ENST00000598860 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
SMG9-207ENST00000598860 GPR37O15354 613 aa15.97■□□□□ 0.15
SMG9-207ENST00000598860 KRTAP3-3Q9BYR6 98 aa15.97■□□□□ 0.15
SMG9-207ENST00000598860 KRTAP3-2Q9BYR7 98 aa15.97■□□□□ 0.15
SMG9-207ENST00000598860 AK7Q96M32 723 aa15.96■□□□□ 0.15
SMG9-207ENST00000598860 CFAP74Q9C0B2 1584 aa15.96■□□□□ 0.14
SMG9-207ENST00000598860 LSM11P83369 360 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMG9-207ENST00000598860 KRI1Q8N9T8 703 aaKnown RBP15.95■□□□□ 0.14
SMG9-207ENST00000598860 ZBED2Q9BTP6 218 aa15.95■□□□□ 0.14
SMG9-207ENST00000598860 DENND4BO75064 1496 aaPredicted RBP15.95■□□□□ 0.14
SMG9-207ENST00000598860 ITSN2Q9NZM3 1697 aa15.93■□□□□ 0.14
SMG9-207ENST00000598860 PROX2Q3B8N5 592 aa15.93■□□□□ 0.14
SMG9-207ENST00000598860 MYO5CQ9NQX4 1742 aa15.92■□□□□ 0.14
SMG9-207ENST00000598860 PRSS12P56730 875 aa15.92■□□□□ 0.14
SMG9-207ENST00000598860 HIC1Q14526 733 aa15.92■□□□□ 0.14
SMG9-207ENST00000598860 CDCA7LQ96GN5 454 aa15.92■□□□□ 0.14
SMG9-207ENST00000598860 ADGRL1O94910 1474 aa15.91■□□□□ 0.14
SMG9-207ENST00000598860 ANKRD13DQ6ZTN6 518 aa15.91■□□□□ 0.14
SMG9-207ENST00000598860 SCAPERQ9BY12 1400 aa15.91■□□□□ 0.14
SMG9-207ENST00000598860 GNPATO15228 680 aa15.9■□□□□ 0.14
SMG9-207ENST00000598860 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
SMG9-207ENST00000598860 PADI6Q6TGC4 694 aa15.89■□□□□ 0.13
SMG9-207ENST00000598860 SLC4A5Q9BY07 1137 aa15.89■□□□□ 0.13
SMG9-207ENST00000598860 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
SMG9-207ENST00000598860 ARHGAP5Q13017 1502 aa15.89■□□□□ 0.13
SMG9-207ENST00000598860 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
SMG9-207ENST00000598860 FRMPD1Q5SYB0 1578 aa15.88■□□□□ 0.13
SMG9-207ENST00000598860 FECHP22830 423 aa15.88■□□□□ 0.13
SMG9-207ENST00000598860 RICTORQ6R327 1708 aa15.88■□□□□ 0.13
SMG9-207ENST00000598860 TRIM6-TRIM34B2RNG4 842 aa15.87■□□□□ 0.13
SMG9-207ENST00000598860 RBM27Q9P2N5 1060 aaKnown RBP15.87■□□□□ 0.13
SMG9-207ENST00000598860 TSKSQ9UJT2 592 aa15.87■□□□□ 0.13
SMG9-207ENST00000598860 VPS9D1Q9Y2B5 631 aa15.87■□□□□ 0.13
SMG9-207ENST00000598860 TK2O00142 265 aa15.86■□□□□ 0.13
SMG9-207ENST00000598860 ADGRD1Q6QNK2 874 aa15.86■□□□□ 0.13
SMG9-207ENST00000598860 ERICH6Q7L0X2 663 aa15.86■□□□□ 0.13
SMG9-207ENST00000598860 FAM198AQ9UFP1 575 aa15.86■□□□□ 0.13
SMG9-207ENST00000598860 ARID4BQ4LE39 1312 aaPredicted RBP15.86■□□□□ 0.13
SMG9-207ENST00000598860 PREX2Q70Z35 1606 aa15.86■□□□□ 0.13
SMG9-207ENST00000598860 POGZQ7Z3K3 1410 aa15.84■□□□□ 0.13
SMG9-207ENST00000598860 CDC42BPBQ9Y5S2 1711 aa15.83■□□□□ 0.13
SMG9-207ENST00000598860 ONECUT3O60422 494 aaPredicted RBP15.83■□□□□ 0.12
SMG9-207ENST00000598860 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
SMG9-207ENST00000598860 TTC13Q8NBP0 860 aa15.83■□□□□ 0.12
SMG9-207ENST00000598860 GPBP1L1Q9HC44 474 aaPredicted RBP15.83■□□□□ 0.12
SMG9-207ENST00000598860 ZNF777Q9ULD5 760 aaPredicted RBP15.83■□□□□ 0.12
SMG9-207ENST00000598860 MAGI2Q86UL8 1455 aa15.83■□□□□ 0.12
SMG9-207ENST00000598860 TRIM66O15016 1216 aa15.82■□□□□ 0.12
SMG9-207ENST00000598860 KIAA1468Q9P260 1216 aa15.82■□□□□ 0.12
SMG9-207ENST00000598860 MYT1LQ9UL68 1186 aa15.82■□□□□ 0.12
SMG9-207ENST00000598860 ZMYM4Q5VZL5 1548 aa15.82■□□□□ 0.12
SMG9-207ENST00000598860 MYOM3Q5VTT5 1437 aa15.81■□□□□ 0.12
SMG9-207ENST00000598860 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
SMG9-207ENST00000598860 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
SMG9-207ENST00000598860 GPATCH8Q9UKJ3 1502 aaKnown RBP15.8■□□□□ 0.12
SMG9-207ENST00000598860 PACS2Q86VP3 889 aa15.8■□□□□ 0.12
SMG9-207ENST00000598860 RABGEF1Q9UJ41 708 aa15.8■□□□□ 0.12
SMG9-207ENST00000598860 ZFYVE16Q7Z3T8 1539 aa15.79■□□□□ 0.12
SMG9-207ENST00000598860 ARHGEF40Q8TER5 1519 aa15.79■□□□□ 0.12
SMG9-207ENST00000598860 ZNF518AQ6AHZ1 1483 aa15.79■□□□□ 0.12
SMG9-207ENST00000598860 YEATS2Q9ULM3 1422 aa15.79■□□□□ 0.12
SMG9-207ENST00000598860 MIA2Q96PC5 1412 aa15.78■□□□□ 0.12
SMG9-207ENST00000598860 PDE4DQ08499 809 aa15.78■□□□□ 0.12
SMG9-207ENST00000598860 FAM161AQ3B820 660 aa15.77■□□□□ 0.12
SMG9-207ENST00000598860 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
SMG9-207ENST00000598860 PTPN23Q9H3S7 1636 aa15.76■□□□□ 0.11
SMG9-207ENST00000598860 C3orf80F5H4A9 247 aa15.76■□□□□ 0.11
SMG9-207ENST00000598860 HRO43593 1189 aa15.76■□□□□ 0.11
SMG9-207ENST00000598860 MAP2K5Q13163 448 aa15.76■□□□□ 0.11
SMG9-207ENST00000598860 KDM4CQ9H3R0 1056 aa15.76■□□□□ 0.11
SMG9-207ENST00000598860 PNMA3Q9UL41 463 aa15.76■□□□□ 0.11
SMG9-207ENST00000598860 ATP10AO60312 1499 aa15.76■□□□□ 0.11
SMG9-207ENST00000598860 MINK1Q8N4C8 1332 aaPredicted RBP15.75■□□□□ 0.11
SMG9-207ENST00000598860 NBPF26B4DH59 902 aa15.75■□□□□ 0.11
SMG9-207ENST00000598860 HNRNPMP52272 730 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMG9-207ENST00000598860 NUDT18Q6ZVK8 323 aa15.75■□□□□ 0.11
SMG9-207ENST00000598860 FGD6Q6ZV73 1430 aa15.75■□□□□ 0.11
SMG9-207ENST00000598860 TRAPPC8Q9Y2L5 1435 aa15.75■□□□□ 0.11
SMG9-207ENST00000598860 ABCC1P33527 1531 aa15.74■□□□□ 0.11
SMG9-207ENST00000598860 ARHGEF12Q9NZN5 1544 aa15.74■□□□□ 0.11
SMG9-207ENST00000598860 BHMG1C9JSJ3 638 aaPredicted RBP15.74■□□□□ 0.11
SMG9-207ENST00000598860 SMAPO00193 183 aa15.74■□□□□ 0.11
SMG9-207ENST00000598860 TATDN2Q93075 761 aa15.74■□□□□ 0.11
SMG9-207ENST00000598860 RRBP1Q9P2E9 1410 aaKnown RBP15.74■□□□□ 0.11
SMG9-207ENST00000598860 NBPF3Q9H094 633 aa15.73■□□□□ 0.11
SMG9-207ENST00000598860 SEPT9Q9UHD8 586 aaPredicted RBP15.73■□□□□ 0.11
SMG9-207ENST00000598860 ADGRG1Q9Y653 693 aa15.73■□□□□ 0.11
SMG9-207ENST00000598860 BCORL1Q5H9F3 1711 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms