RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 FAM83GA6ND36 823 aa7.22□□□□□ -1.25
HERC3-213ENST00000598772 GPR162Q16538 588 aa7.22□□□□□ -1.25
HERC3-213ENST00000598772 FAM98CQ17RN3 349 aaKnown RBP7.22□□□□□ -1.25
HERC3-213ENST00000598772 ORAI2Q96SN7 254 aa7.22□□□□□ -1.25
HERC3-213ENST00000598772 PIK3C2BO00750 1634 aa7.22□□□□□ -1.25
HERC3-213ENST00000598772 MROH1Q8NDA8 1641 aa7.22□□□□□ -1.25
HERC3-213ENST00000598772 EFCAB6Q5THR3 1501 aa7.22□□□□□ -1.25
HERC3-213ENST00000598772 UTRNP46939 3433 aa7.21□□□□□ -1.25
HERC3-213ENST00000598772 UNC13BO14795 1591 aa7.21□□□□□ -1.25
HERC3-213ENST00000598772 HSPA6P17066 643 aa7.21□□□□□ -1.26
HERC3-213ENST00000598772 CAMKK2Q96RR4 588 aa7.21□□□□□ -1.26
HERC3-213ENST00000598772 ATF5Q9Y2D1 282 aaPredicted RBP7.21□□□□□ -1.26
HERC3-213ENST00000598772 CHD2O14647 1828 aaKnown RBP7.21□□□□□ -1.26
HERC3-213ENST00000598772 CCDC18Q5T9S5 1454 aa7.21□□□□□ -1.26
HERC3-213ENST00000598772 MST1RQ04912 1400 aa7.2□□□□□ -1.26
HERC3-213ENST00000598772 ZBTB7AO95365 584 aa7.2□□□□□ -1.26
HERC3-213ENST00000598772 POTEGQ6S5H5 508 aa7.2□□□□□ -1.26
HERC3-213ENST00000598772 LRRIQ1Q96JM4 1722 aa7.19□□□□□ -1.26
HERC3-213ENST00000598772 VPS72Q15906 364 aa7.19□□□□□ -1.26
HERC3-213ENST00000598772 REM2Q8IYK8 340 aaPredicted RBP7.19□□□□□ -1.26
HERC3-213ENST00000598772 FHDC1Q9C0D6 1143 aaPredicted RBP7.19□□□□□ -1.26
HERC3-213ENST00000598772 PLEKHG1Q9ULL1 1385 aa7.19□□□□□ -1.26
HERC3-213ENST00000598772 MBD5Q9P267 1494 aa7.18□□□□□ -1.26
HERC3-213ENST00000598772 GLI3P10071 1580 aa7.18□□□□□ -1.26
HERC3-213ENST00000598772 ZNF526Q8TF50 670 aaPredicted RBP7.18□□□□□ -1.26
HERC3-213ENST00000598772 AKT1S1Q96B36 256 aa7.18□□□□□ -1.26
HERC3-213ENST00000598772 SYT17Q9BSW7 474 aa7.18□□□□□ -1.26
HERC3-213ENST00000598772 SOS2Q07890 1332 aaPredicted RBP7.18□□□□□ -1.26
HERC3-213ENST00000598772 ONECUT3O60422 494 aaPredicted RBP7.17□□□□□ -1.26
HERC3-213ENST00000598772 RSPH4AQ5TD94 716 aa7.17□□□□□ -1.26
HERC3-213ENST00000598772 KLHL34Q8N239 644 aa7.17□□□□□ -1.26
HERC3-213ENST00000598772 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.17□□□□□ -1.26
HERC3-213ENST00000598772 CEP152O94986 1710 aa7.17□□□□□ -1.26
HERC3-213ENST00000598772 RIMS2Q9UQ26 1411 aa7.17□□□□□ -1.26
HERC3-213ENST00000598772 CHD4Q14839 1912 aa7.17□□□□□ -1.26
HERC3-213ENST00000598772 PITPNM1O00562 1244 aa7.16□□□□□ -1.26
HERC3-213ENST00000598772 POTEIP0CG38 1075 aa7.16□□□□□ -1.26
HERC3-213ENST00000598772 ESCO1Q5FWF5 840 aa7.16□□□□□ -1.26
HERC3-213ENST00000598772 MTUS2Q5JR59 1369 aa7.16□□□□□ -1.26
HERC3-213ENST00000598772 ADGRL3Q9HAR2 1447 aa7.16□□□□□ -1.26
HERC3-213ENST00000598772 FOXO3O43524 673 aa7.15□□□□□ -1.26
HERC3-213ENST00000598772 LMOD2Q6P5Q4 547 aa7.15□□□□□ -1.26
HERC3-213ENST00000598772 CABLES1Q8TDN4 633 aa7.15□□□□□ -1.26
HERC3-213ENST00000598772 PDGFDQ9GZP0 370 aaPredicted RBP7.15□□□□□ -1.26
HERC3-213ENST00000598772 CCDC141Q6ZP82 1450 aa7.15□□□□□ -1.27
HERC3-213ENST00000598772 KANK1Q14678 1352 aa7.14□□□□□ -1.27
HERC3-213ENST00000598772 FAM196AQ6ZSG2 479 aa7.14□□□□□ -1.27
HERC3-213ENST00000598772 GPBP1L1Q9HC44 474 aaPredicted RBP7.14□□□□□ -1.27
HERC3-213ENST00000598772 SLC52A1Q9NWF4 448 aa7.14□□□□□ -1.27
HERC3-213ENST00000598772 C1orf167Q5SNV9 1468 aa7.13□□□□□ -1.27
HERC3-213ENST00000598772 DCCP43146 1447 aa7.13□□□□□ -1.27
HERC3-213ENST00000598772 NUTM2FA1L443 756 aa7.13□□□□□ -1.27
HERC3-213ENST00000598772 RRP7BPQ9NSQ0 103 aa7.13□□□□□ -1.27
HERC3-213ENST00000598772 WWC3Q9ULE0 1092 aa7.13□□□□□ -1.27
HERC3-213ENST00000598772 MYOM2P54296 1465 aa7.12□□□□□ -1.27
HERC3-213ENST00000598772 CASKIN1Q8WXD9 1431 aa7.12□□□□□ -1.27
HERC3-213ENST00000598772 PTPRUQ92729 1446 aa7.12□□□□□ -1.27
HERC3-213ENST00000598772 NPHP3Q7Z494 1330 aa7.12□□□□□ -1.27
HERC3-213ENST00000598772 BCL11BQ9C0K0 894 aaPredicted RBP7.12□□□□□ -1.27
HERC3-213ENST00000598772 RGPD1P0DJD0 1748 aa7.12□□□□□ -1.27
HERC3-213ENST00000598772 SPHKAPQ2M3C7 1700 aa7.12□□□□□ -1.27
HERC3-213ENST00000598772 ARHGAP31Q2M1Z3 1444 aa7.11□□□□□ -1.27
HERC3-213ENST00000598772 PIK3R4Q99570 1358 aa7.11□□□□□ -1.27
HERC3-213ENST00000598772 APLP1P51693 650 aa7.11□□□□□ -1.27
HERC3-213ENST00000598772 SLIT2O94813 1529 aa7.11□□□□□ -1.27
HERC3-213ENST00000598772 ADAMTS13Q76LX8 1427 aa7.1□□□□□ -1.27
HERC3-213ENST00000598772 PTGER2P43116 358 aa7.1□□□□□ -1.27
HERC3-213ENST00000598772 PDE3BQ13370 1112 aa7.1□□□□□ -1.27
HERC3-213ENST00000598772 BTG4Q9NY30 223 aa7.1□□□□□ -1.27
HERC3-213ENST00000598772 NRKQ7Z2Y5 1582 aa7.1□□□□□ -1.27
HERC3-213ENST00000598772 ADGRB3O60242 1522 aa7.1□□□□□ -1.27
HERC3-213ENST00000598772 RPRD2Q5VT52 1461 aaKnown RBP7.1□□□□□ -1.27
HERC3-213ENST00000598772 DISP2A7MBM2 1401 aa7.1□□□□□ -1.27
HERC3-213ENST00000598772 PARD3Q8TEW0 1356 aa7.09□□□□□ -1.27
HERC3-213ENST00000598772 DNAJC5GQ8N7S2 189 aa7.09□□□□□ -1.27
HERC3-213ENST00000598772 ARXQ96QS3 562 aa7.09□□□□□ -1.27
HERC3-213ENST00000598772 ZFYVE9O95405 1425 aa7.09□□□□□ -1.28
HERC3-213ENST00000598772 NOS1P29475 1434 aa7.09□□□□□ -1.28
HERC3-213ENST00000598772 TRPM2O94759 1503 aa7.08□□□□□ -1.28
HERC3-213ENST00000598772 EHBP1L1Q8N3D4 1523 aa7.08□□□□□ -1.28
HERC3-213ENST00000598772 MARF1Q9Y4F3 1742 aaKnown RBP7.08□□□□□ -1.28
HERC3-213ENST00000598772 C19orf67A6NJJ6 358 aa7.07□□□□□ -1.28
HERC3-213ENST00000598772 KRT28Q7Z3Y7 464 aa7.07□□□□□ -1.28
HERC3-213ENST00000598772 ANO8Q9HCE9 1232 aaPredicted RBP7.07□□□□□ -1.28
HERC3-213ENST00000598772 USP35Q9P2H5 1018 aa7.07□□□□□ -1.28
HERC3-213ENST00000598772 ATP10DQ9P241 1426 aa7.07□□□□□ -1.28
HERC3-213ENST00000598772 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.07□□□□□ -1.28
HERC3-213ENST00000598772 COL22A1Q8NFW1 1626 aaPredicted RBP7.06□□□□□ -1.28
HERC3-213ENST00000598772 HTRA3P83110 453 aa7.06□□□□□ -1.28
HERC3-213ENST00000598772 ZNF326Q5BKZ1 582 aaKnown RBP7.06□□□□□ -1.28
HERC3-213ENST00000598772 ADGRB2O60241 1585 aa7.06□□□□□ -1.28
HERC3-213ENST00000598772 MYOM1P52179 1685 aa7.06□□□□□ -1.28
HERC3-213ENST00000598772 OTUD5Q96G74 571 aa7.05□□□□□ -1.28
HERC3-213ENST00000598772 STRN4Q9NRL3 753 aa7.05□□□□□ -1.28
HERC3-213ENST00000598772 STK32BQ9NY57 414 aa7.05□□□□□ -1.28
HERC3-213ENST00000598772 MYO5BQ9ULV0 1848 aa7.05□□□□□ -1.28
HERC3-213ENST00000598772 METP08581 1390 aa7.05□□□□□ -1.28
HERC3-213ENST00000598772 LRPPRCP42704 1394 aaKnown RBP7.05□□□□□ -1.28
HERC3-213ENST00000598772 TNS1Q9HBL0 1735 aaKnown RBP7.04□□□□□ -1.28
HERC3-213ENST00000598772 SPATA31A3Q5VYP0 1347 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms