RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 BAG6P46379 1132 aa20.44■□□□□ 0.86
IRF3-218ENST00000597369 ONECUT3O60422 494 aaPredicted RBP20.43■□□□□ 0.86
IRF3-218ENST00000597369 SEPT12Q8IYM1 358 aa20.43■□□□□ 0.86
IRF3-218ENST00000597369 IFFO2Q5TF58 517 aa20.41■□□□□ 0.86
IRF3-218ENST00000597369 IQGAP3Q86VI3 1631 aa20.41■□□□□ 0.86
IRF3-218ENST00000597369 E9PCH4 1651 aa20.41■□□□□ 0.86
IRF3-218ENST00000597369 ADGRL2O95490 1459 aa20.4■□□□□ 0.86
IRF3-218ENST00000597369 NPHP3Q7Z494 1330 aa20.39■□□□□ 0.85
IRF3-218ENST00000597369 KRT27Q7Z3Y8 459 aa20.39■□□□□ 0.85
IRF3-218ENST00000597369 ANKRD50Q9ULJ7 1429 aa20.38■□□□□ 0.85
IRF3-218ENST00000597369 PXDNQ92626 1479 aa20.37■□□□□ 0.85
IRF3-218ENST00000597369 R3HDM1Q15032 1099 aaKnown RBP20.36■□□□□ 0.85
IRF3-218ENST00000597369 VPS72Q15906 364 aa20.35■□□□□ 0.85
IRF3-218ENST00000597369 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
IRF3-218ENST00000597369 EN1Q05925 392 aaPredicted RBP20.32■□□□□ 0.84
IRF3-218ENST00000597369 RGPD1P0DJD0 1748 aa20.31■□□□□ 0.84
IRF3-218ENST00000597369 DISP2A7MBM2 1401 aa20.29■□□□□ 0.84
IRF3-218ENST00000597369 UTRNP46939 3433 aa20.29■□□□□ 0.84
IRF3-218ENST00000597369 ESCO1Q5FWF5 840 aa20.29■□□□□ 0.84
IRF3-218ENST00000597369 NWD2Q9ULI1 1742 aa20.29■□□□□ 0.84
IRF3-218ENST00000597369 PRAG1Q86YV5 1406 aa20.28■□□□□ 0.84
IRF3-218ENST00000597369 LRPPRCP42704 1394 aaKnown RBP20.28■□□□□ 0.84
IRF3-218ENST00000597369 ROBO2Q9HCK4 1378 aa20.28■□□□□ 0.84
IRF3-218ENST00000597369 USP32Q8NFA0 1604 aa20.27■□□□□ 0.84
IRF3-218ENST00000597369 FOXO3O43524 673 aa20.27■□□□□ 0.84
IRF3-218ENST00000597369 DCAF8L1A6NGE4 600 aa20.24■□□□□ 0.83
IRF3-218ENST00000597369 XPCQ01831 940 aaPredicted RBP20.24■□□□□ 0.83
IRF3-218ENST00000597369 ZNF326Q5BKZ1 582 aaKnown RBP20.24■□□□□ 0.83
IRF3-218ENST00000597369 HFM1A2PYH4 1435 aa20.24■□□□□ 0.83
IRF3-218ENST00000597369 SPATA31A3Q5VYP0 1347 aa20.24■□□□□ 0.83
IRF3-218ENST00000597369 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
IRF3-218ENST00000597369 CDC42BPGQ6DT37 1551 aa20.22■□□□□ 0.83
IRF3-218ENST00000597369 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
IRF3-218ENST00000597369 CCDC9Q9Y3X0 531 aaKnown RBP20.21■□□□□ 0.83
IRF3-218ENST00000597369 TNS1Q9HBL0 1735 aaKnown RBP20.21■□□□□ 0.83
IRF3-218ENST00000597369 EZH2Q15910 746 aaKnown RBP20.19■□□□□ 0.82
IRF3-218ENST00000597369 CAMKK2Q96RR4 588 aa20.18■□□□□ 0.82
IRF3-218ENST00000597369 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
IRF3-218ENST00000597369 NINLQ9Y2I6 1382 aa20.17■□□□□ 0.82
IRF3-218ENST00000597369 A0A0G2JS52 829 aa20.15■□□□□ 0.82
IRF3-218ENST00000597369 MYT1Q01538 1121 aa20.15■□□□□ 0.82
IRF3-218ENST00000597369 FAM98CQ17RN3 349 aaKnown RBP20.15■□□□□ 0.82
IRF3-218ENST00000597369 ZNF784Q8NCA9 323 aaPredicted RBP20.15■□□□□ 0.82
IRF3-218ENST00000597369 PARD3Q8TEW0 1356 aa20.15■□□□□ 0.82
IRF3-218ENST00000597369 CCDC144AA2RUR9 1427 aa20.13■□□□□ 0.81
IRF3-218ENST00000597369 HAP1P54257 671 aaPredicted RBP20.13■□□□□ 0.81
IRF3-218ENST00000597369 NUP155O75694 1391 aa20.12■□□□□ 0.81
IRF3-218ENST00000597369 ADGRB2O60241 1585 aa20.12■□□□□ 0.81
IRF3-218ENST00000597369 KIF1AQ12756 1690 aa20.11■□□□□ 0.81
IRF3-218ENST00000597369 C1QTNF8P60827 252 aa20.11■□□□□ 0.81
IRF3-218ENST00000597369 FAM182BQ5T319 152 aa20.11■□□□□ 0.81
IRF3-218ENST00000597369 KRT28Q7Z3Y7 464 aa20.11■□□□□ 0.81
IRF3-218ENST00000597369 SPON1Q9HCB6 807 aa20.11■□□□□ 0.81
IRF3-218ENST00000597369 PPP1R1BQ9UD71 204 aaPredicted RBP20.11■□□□□ 0.81
IRF3-218ENST00000597369 NRAPQ86VF7 1730 aa20.1■□□□□ 0.81
IRF3-218ENST00000597369 FAM83GA6ND36 823 aa20.1■□□□□ 0.81
IRF3-218ENST00000597369 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
IRF3-218ENST00000597369 CEP350Q5VT06 3117 aa20.1■□□□□ 0.81
IRF3-218ENST00000597369 RREB1Q92766 1687 aa20.1■□□□□ 0.81
IRF3-218ENST00000597369 CABLES1Q8TDN4 633 aa20.09■□□□□ 0.81
IRF3-218ENST00000597369 ABCA3Q99758 1704 aa20.09■□□□□ 0.81
IRF3-218ENST00000597369 KIF1BO60333 1816 aa20.09■□□□□ 0.81
IRF3-218ENST00000597369 CAMTA1Q9Y6Y1 1673 aa20.08■□□□□ 0.81
IRF3-218ENST00000597369 KCNQ2O43526 872 aa20.08■□□□□ 0.81
IRF3-218ENST00000597369 NAIPQ13075 1403 aa20.08■□□□□ 0.8
IRF3-218ENST00000597369 TNS3Q68CZ2 1445 aa20.08■□□□□ 0.8
IRF3-218ENST00000597369 NBPF8Q3BBV2 869 aa20.07■□□□□ 0.8
IRF3-218ENST00000597369 NBPF14Q5TI25 921 aa20.07■□□□□ 0.8
IRF3-218ENST00000597369 THSD7AQ9UPZ6 1657 aa20.07■□□□□ 0.8
IRF3-218ENST00000597369 NUP188Q5SRE5 1749 aa20.06■□□□□ 0.8
IRF3-218ENST00000597369 NUTM2FA1L443 756 aa20.05■□□□□ 0.8
IRF3-218ENST00000597369 PSME1Q06323 249 aa20.05■□□□□ 0.8
IRF3-218ENST00000597369 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
IRF3-218ENST00000597369 FAM196AQ6ZSG2 479 aa20.05■□□□□ 0.8
IRF3-218ENST00000597369 CHD4Q14839 1912 aa20.05■□□□□ 0.8
IRF3-218ENST00000597369 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
IRF3-218ENST00000597369 TRIM37O94972 964 aa20.04■□□□□ 0.8
IRF3-218ENST00000597369 APBA3O96018 575 aa20.04■□□□□ 0.8
IRF3-218ENST00000597369 APLP2Q06481 763 aa20.04■□□□□ 0.8
IRF3-218ENST00000597369 ROCK1Q13464 1354 aa20.04■□□□□ 0.8
IRF3-218ENST00000597369 SPATA31A5Q5VU36 1347 aa20.03■□□□□ 0.8
IRF3-218ENST00000597369 SPATA31A7Q8IWB4 1347 aa20.03■□□□□ 0.8
IRF3-218ENST00000597369 FMN2Q9NZ56 1722 aa20.03■□□□□ 0.8
IRF3-218ENST00000597369 BTG4Q9NY30 223 aa20.03■□□□□ 0.8
IRF3-218ENST00000597369 SBNO1A3KN83 1393 aa20.03■□□□□ 0.8
IRF3-218ENST00000597369 ARHGEF10O15013 1369 aa20.02■□□□□ 0.8
IRF3-218ENST00000597369 COL14A1Q05707 1796 aaKnown RBP20■□□□□ 0.79
IRF3-218ENST00000597369 RPGRIP1LQ68CZ1 1315 aa20■□□□□ 0.79
IRF3-218ENST00000597369 TECPR2O15040 1411 aa19.99■□□□□ 0.79
IRF3-218ENST00000597369 WAPLQ7Z5K2 1190 aa19.98■□□□□ 0.79
IRF3-218ENST00000597369 RGPD8O14715 1765 aaPredicted RBP19.98■□□□□ 0.79
IRF3-218ENST00000597369 PHF8Q9UPP1 1060 aa19.96■□□□□ 0.79
IRF3-218ENST00000597369 RRBP1Q9P2E9 1410 aaKnown RBP19.95■□□□□ 0.78
IRF3-218ENST00000597369 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
IRF3-218ENST00000597369 PPLO60437 1756 aa19.94■□□□□ 0.78
IRF3-218ENST00000597369 LMOD2Q6P5Q4 547 aa19.94■□□□□ 0.78
IRF3-218ENST00000597369 NRXN1Q9ULB1 1477 aa19.93■□□□□ 0.78
IRF3-218ENST00000597369 ABCC11Q96J66 1382 aa19.92■□□□□ 0.78
IRF3-218ENST00000597369 KNDC1Q76NI1 1749 aa19.9■□□□□ 0.78
IRF3-218ENST00000597369 SPATA31A1Q5TZJ5 1347 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms