RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 IQSEC2Q5JU85 1478 aa21.01■□□□□ 0.95
SIN3B-206ENST00000595541 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
SIN3B-206ENST00000595541 KIF3BO15066 747 aa21■□□□□ 0.95
SIN3B-206ENST00000595541 ZFYVE16Q7Z3T8 1539 aa21■□□□□ 0.95
SIN3B-206ENST00000595541 MTHFSP49914 203 aa20.98■□□□□ 0.95
SIN3B-206ENST00000595541 TET3O43151 1660 aa20.98■□□□□ 0.95
SIN3B-206ENST00000595541 XRCC6P12956 609 aaKnown RBP eCLIP20.98■□□□□ 0.95
SIN3B-206ENST00000595541 UPF2Q9HAU5 1272 aaKnown RBP20.97■□□□□ 0.95
SIN3B-206ENST00000595541 DEPDC5O75140 1603 aa20.97■□□□□ 0.95
SIN3B-206ENST00000595541 CHD1O14646 1710 aa20.97■□□□□ 0.95
SIN3B-206ENST00000595541 WDR63Q8IWG1 891 aa20.97■□□□□ 0.95
SIN3B-206ENST00000595541 GZF1Q9H116 711 aaPredicted RBP20.97■□□□□ 0.95
SIN3B-206ENST00000595541 TRAK1Q9UPV9 953 aa20.97■□□□□ 0.95
SIN3B-206ENST00000595541 PANK2Q9BZ23 570 aa20.97■□□□□ 0.95
SIN3B-206ENST00000595541 RSPH6AQ9H0K4 717 aa20.96■□□□□ 0.95
SIN3B-206ENST00000595541 SHROOM2Q13796 1616 aa20.96■□□□□ 0.95
SIN3B-206ENST00000595541 RWDD1Q9H446 243 aaPredicted RBP20.96■□□□□ 0.95
SIN3B-206ENST00000595541 RTEL1-TNFRSF6BF6WH68 1400 aa20.95■□□□□ 0.94
SIN3B-206ENST00000595541 MCM4P33991 863 aa20.94■□□□□ 0.94
SIN3B-206ENST00000595541 MVPQ14764 893 aaKnown RBP20.94■□□□□ 0.94
SIN3B-206ENST00000595541 MYOM2P54296 1465 aa20.94■□□□□ 0.94
SIN3B-206ENST00000595541 ZCCHC11Q5TAX3 1644 aaKnown RBP20.94■□□□□ 0.94
SIN3B-206ENST00000595541 VWDEQ8N2E2 1590 aa20.94■□□□□ 0.94
SIN3B-206ENST00000595541 TSR2Q969E8 191 aaKnown RBP20.93■□□□□ 0.94
SIN3B-206ENST00000595541 MFAP1P55081 439 aaKnown RBP20.92■□□□□ 0.94
SIN3B-206ENST00000595541 AAMPQ13685 434 aa20.92■□□□□ 0.94
SIN3B-206ENST00000595541 L1TD1Q5T7N2 865 aaKnown RBP20.92■□□□□ 0.94
SIN3B-206ENST00000595541 FSD2A1L4K1 749 aa20.92■□□□□ 0.94
SIN3B-206ENST00000595541 TMEM132EQ6IEE7 984 aa20.92■□□□□ 0.94
SIN3B-206ENST00000595541 SLC24A1O60721 1099 aa20.91■□□□□ 0.94
SIN3B-206ENST00000595541 SBNO2Q9Y2G9 1366 aa20.91■□□□□ 0.94
SIN3B-206ENST00000595541 ZMYM3Q14202 1370 aa20.91■□□□□ 0.94
SIN3B-206ENST00000595541 KANK1Q14678 1352 aa20.91■□□□□ 0.94
SIN3B-206ENST00000595541 C22orf23Q9BZE7 217 aa20.91■□□□□ 0.94
SIN3B-206ENST00000595541 ZNF518AQ6AHZ1 1483 aa20.91■□□□□ 0.94
SIN3B-206ENST00000595541 MROH2AA6NES4 1674 aa20.9■□□□□ 0.94
SIN3B-206ENST00000595541 CCDC27Q2M243 656 aa20.9■□□□□ 0.94
SIN3B-206ENST00000595541 NOS1P29475 1434 aa20.89■□□□□ 0.94
SIN3B-206ENST00000595541 MYO3AQ8NEV4 1616 aa20.89■□□□□ 0.93
SIN3B-206ENST00000595541 DZIP1LQ8IYY4 767 aaKnown RBP20.89■□□□□ 0.93
SIN3B-206ENST00000595541 ZKSCAN2Q63HK3 967 aa20.88■□□□□ 0.93
SIN3B-206ENST00000595541 MROH1Q8NDA8 1641 aa20.88■□□□□ 0.93
SIN3B-206ENST00000595541 U2AF1L5P0DN76 240 aaPredicted RBP20.88■□□□□ 0.93
SIN3B-206ENST00000595541 CHGAP10645 457 aaKnown RBP20.88■□□□□ 0.93
SIN3B-206ENST00000595541 U2AF1Q01081 240 aaKnown RBP eCLIP20.88■□□□□ 0.93
SIN3B-206ENST00000595541 IFT172Q9UG01 1749 aa20.88■□□□□ 0.93
SIN3B-206ENST00000595541 NRXN1Q9ULB1 1477 aa20.87■□□□□ 0.93
SIN3B-206ENST00000595541 GOLGA6L3A6NEY3 463 aa20.87■□□□□ 0.93
SIN3B-206ENST00000595541 TRIM27P14373 513 aa20.86■□□□□ 0.93
SIN3B-206ENST00000595541 NEURL4Q96JN8 1562 aa20.86■□□□□ 0.93
SIN3B-206ENST00000595541 FTSJ3Q8IY81 847 aaKnown RBP20.86■□□□□ 0.93
SIN3B-206ENST00000595541 ZNF692Q9BU19 519 aaPredicted RBP20.86■□□□□ 0.93
SIN3B-206ENST00000595541 ATP7AQ04656 1500 aa20.86■□□□□ 0.93
SIN3B-206ENST00000595541 EXOSC9Q06265 439 aaKnown RBP20.85■□□□□ 0.93
SIN3B-206ENST00000595541 MYH16Q9H6N6 1097 aa20.85■□□□□ 0.93
SIN3B-206ENST00000595541 TRAK2O60296 914 aa20.85■□□□□ 0.93
SIN3B-206ENST00000595541 KIF1BO60333 1816 aa20.85■□□□□ 0.93
SIN3B-206ENST00000595541 SSH1Q8WYL5 1049 aa20.84■□□□□ 0.93
SIN3B-206ENST00000595541 CHMP5Q9NZZ3 219 aa20.84■□□□□ 0.93
SIN3B-206ENST00000595541 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.93
SIN3B-206ENST00000595541 INO80Q9ULG1 1556 aaPredicted RBP20.82■□□□□ 0.92
SIN3B-206ENST00000595541 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
SIN3B-206ENST00000595541 C14orf93Q9H972 538 aaKnown RBP20.82■□□□□ 0.92
SIN3B-206ENST00000595541 ITPRIPQ8IWB1 547 aa20.81■□□□□ 0.92
SIN3B-206ENST00000595541 CD109Q6YHK3 1445 aa20.81■□□□□ 0.92
SIN3B-206ENST00000595541 HDAC1Q13547 482 aaPredicted RBP20.8■□□□□ 0.92
SIN3B-206ENST00000595541 TRIM35Q9UPQ4 493 aa20.8■□□□□ 0.92
SIN3B-206ENST00000595541 QRICH2Q9H0J4 1663 aa20.8■□□□□ 0.92
SIN3B-206ENST00000595541 NOB1Q9ULX3 412 aaKnown RBP20.8■□□□□ 0.92
SIN3B-206ENST00000595541 ZC3H13Q5T200 1668 aaKnown RBP20.79■□□□□ 0.92
SIN3B-206ENST00000595541 SMC5Q8IY18 1101 aa20.79■□□□□ 0.92
SIN3B-206ENST00000595541 EFCAB6Q5THR3 1501 aa20.79■□□□□ 0.92
SIN3B-206ENST00000595541 PPRC1Q5VV67 1664 aaKnown RBP20.79■□□□□ 0.92
SIN3B-206ENST00000595541 ADGRB1O14514 1584 aa20.79■□□□□ 0.92
SIN3B-206ENST00000595541 NUTM2DQ5VT03 806 aaPredicted RBP20.79■□□□□ 0.92
SIN3B-206ENST00000595541 TMEM57Q8N5G2 664 aa20.79■□□□□ 0.92
SIN3B-206ENST00000595541 PLEKHF1Q96S99 279 aa20.79■□□□□ 0.92
SIN3B-206ENST00000595541 CFAP65Q6ZU64 1925 aaKnown RBP20.78■□□□□ 0.92
SIN3B-206ENST00000595541 FANCAO15360 1455 aa20.78■□□□□ 0.92
SIN3B-206ENST00000595541 DDIT3P35638 169 aa20.78■□□□□ 0.92
SIN3B-206ENST00000595541 ATF7IPQ6VMQ6 1270 aa20.78■□□□□ 0.92
SIN3B-206ENST00000595541 ADGRB2O60241 1585 aa20.77■□□□□ 0.92
SIN3B-206ENST00000595541 SETBP1Q9Y6X0 1596 aa20.77■□□□□ 0.92
SIN3B-206ENST00000595541 TMPOP42166 694 aaKnown RBP20.77■□□□□ 0.92
SIN3B-206ENST00000595541 CABP2Q9NPB3 220 aa20.76■□□□□ 0.91
SIN3B-206ENST00000595541 UHRF1BP1LA0JNW5 1464 aa20.76■□□□□ 0.91
SIN3B-206ENST00000595541 U2SURPO15042 1029 aaKnown RBP20.76■□□□□ 0.91
SIN3B-206ENST00000595541 ZBTB40Q9NUA8 1239 aa20.76■□□□□ 0.91
SIN3B-206ENST00000595541 DDX19BQ9UMR2 479 aa20.75■□□□□ 0.91
SIN3B-206ENST00000595541 ADGRB3O60242 1522 aa20.75■□□□□ 0.91
SIN3B-206ENST00000595541 LNPKQ9C0E8 428 aa20.74■□□□□ 0.91
SIN3B-206ENST00000595541 ARAP3Q8WWN8 1544 aa20.74■□□□□ 0.91
SIN3B-206ENST00000595541 CLCN1P35523 988 aa20.74■□□□□ 0.91
SIN3B-206ENST00000595541 SAFB2Q14151 953 aaKnown RBP eCLIP20.74■□□□□ 0.91
SIN3B-206ENST00000595541 HSCBQ8IWL3 235 aa20.74■□□□□ 0.91
SIN3B-206ENST00000595541 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
SIN3B-206ENST00000595541 USP32Q8NFA0 1604 aa20.74■□□□□ 0.91
SIN3B-206ENST00000595541 NCOA3Q9Y6Q9 1424 aa20.73■□□□□ 0.91
SIN3B-206ENST00000595541 GAS2L3Q86XJ1 694 aa20.73■□□□□ 0.91
SIN3B-206ENST00000595541 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms