RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 REPIN1Q9BWE0 567 aaKnown RBP6.53□□□□□ -1.36
LINC00649-204ENST00000593977 GPCPD1Q9NPB8 672 aa6.53□□□□□ -1.36
LINC00649-204ENST00000593977 ZNF335Q9H4Z2 1342 aaPredicted RBP6.52□□□□□ -1.37
LINC00649-204ENST00000593977 UACAQ9BZF9 1416 aa6.52□□□□□ -1.37
LINC00649-204ENST00000593977 PHF14O94880 888 aa6.52□□□□□ -1.37
LINC00649-204ENST00000593977 MFAP1P55081 439 aaKnown RBP6.52□□□□□ -1.37
LINC00649-204ENST00000593977 PIP4K2BP78356 416 aa6.52□□□□□ -1.37
LINC00649-204ENST00000593977 EN1Q05925 392 aaPredicted RBP6.52□□□□□ -1.37
LINC00649-204ENST00000593977 MCM6Q14566 821 aa6.52□□□□□ -1.37
LINC00649-204ENST00000593977 SKIV2LQ15477 1246 aaKnown RBP6.52□□□□□ -1.37
LINC00649-204ENST00000593977 CLUAP1Q96AJ1 413 aa6.52□□□□□ -1.37
LINC00649-204ENST00000593977 NPDC1Q9NQX5 325 aaPredicted RBP6.52□□□□□ -1.37
LINC00649-204ENST00000593977 TNIKQ9UKE5 1360 aa6.52□□□□□ -1.37
LINC00649-204ENST00000593977 MAP3K7O43318 606 aa6.51□□□□□ -1.37
LINC00649-204ENST00000593977 SLC34A2O95436 690 aa6.51□□□□□ -1.37
LINC00649-204ENST00000593977 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
LINC00649-204ENST00000593977 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
LINC00649-204ENST00000593977 PREX1Q8TCU6 1659 aa6.51□□□□□ -1.37
LINC00649-204ENST00000593977 ERICH3Q5RHP9 1530 aa6.5□□□□□ -1.37
LINC00649-204ENST00000593977 WDR7Q9Y4E6 1490 aa6.5□□□□□ -1.37
LINC00649-204ENST00000593977 CEBPAP49715 358 aaPredicted RBP6.5□□□□□ -1.37
LINC00649-204ENST00000593977 MDM2Q00987 491 aaPredicted RBP6.5□□□□□ -1.37
LINC00649-204ENST00000593977 PUS7Q96PZ0 661 aaKnown RBP6.5□□□□□ -1.37
LINC00649-204ENST00000593977 GZF1Q9H116 711 aaPredicted RBP6.5□□□□□ -1.37
LINC00649-204ENST00000593977 PHLDB1Q86UU1 1377 aa6.49□□□□□ -1.37
LINC00649-204ENST00000593977 TOM1O60784 492 aa6.49□□□□□ -1.37
LINC00649-204ENST00000593977 SSTR3P32745 418 aaPredicted RBP6.49□□□□□ -1.37
LINC00649-204ENST00000593977 EMP3P54852 163 aa6.49□□□□□ -1.37
LINC00649-204ENST00000593977 KCNH8Q96L42 1107 aa6.49□□□□□ -1.37
LINC00649-204ENST00000593977 CDHR5Q9HBB8 845 aa6.49□□□□□ -1.37
LINC00649-204ENST00000593977 UHRF1BP1Q6BDS2 1440 aa6.49□□□□□ -1.37
LINC00649-204ENST00000593977 TTC37Q6PGP7 1564 aa6.48□□□□□ -1.37
LINC00649-204ENST00000593977 OATP04181 439 aa6.48□□□□□ -1.37
LINC00649-204ENST00000593977 BEGAINQ9BUH8 593 aa6.48□□□□□ -1.37
LINC00649-204ENST00000593977 POGZQ7Z3K3 1410 aa6.48□□□□□ -1.37
LINC00649-204ENST00000593977 TYW1BQ6NUM6 668 aa6.47□□□□□ -1.37
LINC00649-204ENST00000593977 PROSER2Q86WR7 435 aaPredicted RBP6.47□□□□□ -1.37
LINC00649-204ENST00000593977 FBXW7Q969H0 707 aa6.47□□□□□ -1.37
LINC00649-204ENST00000593977 NCOA1Q15788 1441 aa6.47□□□□□ -1.37
LINC00649-204ENST00000593977 ZCCHC11Q5TAX3 1644 aaKnown RBP6.47□□□□□ -1.37
LINC00649-204ENST00000593977 C3orf67Q6ZVT6 689 aa6.46□□□□□ -1.38
LINC00649-204ENST00000593977 METTL3Q86U44 580 aaKnown RBP6.46□□□□□ -1.38
LINC00649-204ENST00000593977 PHOX2BQ99453 314 aa6.46□□□□□ -1.38
LINC00649-204ENST00000593977 FAM217BQ9NTX9 383 aaPredicted RBP6.46□□□□□ -1.38
LINC00649-204ENST00000593977 PCDHGA10Q9Y5H3 936 aa6.46□□□□□ -1.38
LINC00649-204ENST00000593977 SETD1BQ9UPS6 1966 aaKnown RBP6.46□□□□□ -1.38
LINC00649-204ENST00000593977 MLECQ14165 292 aa6.45□□□□□ -1.38
LINC00649-204ENST00000593977 DIXDC1Q155Q3 683 aa6.45□□□□□ -1.38
LINC00649-204ENST00000593977 RBM33Q96EV2 1170 aaKnown RBP6.45□□□□□ -1.38
LINC00649-204ENST00000593977 HS3ST6Q96QI5 342 aa6.45□□□□□ -1.38
LINC00649-204ENST00000593977 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.45□□□□□ -1.38
LINC00649-204ENST00000593977 ATP1B4Q9UN42 357 aaPredicted RBP6.45□□□□□ -1.38
LINC00649-204ENST00000593977 SETD1AO15047 1707 aaKnown RBP6.45□□□□□ -1.38
LINC00649-204ENST00000593977 FRMPD1Q5SYB0 1578 aa6.44□□□□□ -1.38
LINC00649-204ENST00000593977 WRNQ14191 1432 aaPredicted RBP eCLIP6.44□□□□□ -1.38
LINC00649-204ENST00000593977 CARMIL2Q6F5E8 1435 aa6.44□□□□□ -1.38
LINC00649-204ENST00000593977 SPDYE5A6NIY4 337 aa6.44□□□□□ -1.38
LINC00649-204ENST00000593977 E9PSI1 815 aa6.44□□□□□ -1.38
LINC00649-204ENST00000593977 TSR1Q2NL82 804 aaKnown RBP6.44□□□□□ -1.38
LINC00649-204ENST00000593977 FNBP4Q8N3X1 1017 aaPredicted RBP6.44□□□□□ -1.38
LINC00649-204ENST00000593977 RETREG2Q8NC44 543 aa6.44□□□□□ -1.38
LINC00649-204ENST00000593977 CHMP4AQ9BY43 222 aa6.44□□□□□ -1.38
LINC00649-204ENST00000593977 SERPINA10Q9UK55 444 aa6.44□□□□□ -1.38
LINC00649-204ENST00000593977 ZNF777Q9ULD5 760 aaPredicted RBP6.44□□□□□ -1.38
LINC00649-204ENST00000593977 FANCAO15360 1455 aa6.43□□□□□ -1.38
LINC00649-204ENST00000593977 IRF5Q13568 498 aa6.43□□□□□ -1.38
LINC00649-204ENST00000593977 PROCA1Q8NCQ7 364 aaPredicted RBP6.43□□□□□ -1.38
LINC00649-204ENST00000593977 BANK1Q8NDB2 785 aa6.43□□□□□ -1.38
LINC00649-204ENST00000593977 PXYLP1Q8TE99 480 aa6.43□□□□□ -1.38
LINC00649-204ENST00000593977 CCDC97Q96F63 343 aaPredicted RBP6.43□□□□□ -1.38
LINC00649-204ENST00000593977 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.43□□□□□ -1.38
LINC00649-204ENST00000593977 POLR3EQ9NVU0 708 aa6.43□□□□□ -1.38
LINC00649-204ENST00000593977 RBM27Q9P2N5 1060 aaKnown RBP6.43□□□□□ -1.38
LINC00649-204ENST00000593977 ARHGEF40Q8TER5 1519 aa6.43□□□□□ -1.38
LINC00649-204ENST00000593977 SIGLEC1Q9BZZ2 1709 aa6.42□□□□□ -1.38
LINC00649-204ENST00000593977 POTEB3A0JP26 581 aa6.42□□□□□ -1.38
LINC00649-204ENST00000593977 FAM205CA6NFA0 338 aa6.42□□□□□ -1.38
LINC00649-204ENST00000593977 CLK2P49760 499 aaKnown RBP6.42□□□□□ -1.38
LINC00649-204ENST00000593977 MYSM1Q5VVJ2 828 aa6.42□□□□□ -1.38
LINC00649-204ENST00000593977 POTEBQ6S5H4 581 aa6.42□□□□□ -1.38
LINC00649-204ENST00000593977 ADGRG1Q9Y653 693 aa6.42□□□□□ -1.38
LINC00649-204ENST00000593977 ALKQ9UM73 1620 aa6.42□□□□□ -1.38
LINC00649-204ENST00000593977 ARHGEF12Q9NZN5 1544 aa6.41□□□□□ -1.38
LINC00649-204ENST00000593977 RNF166Q96A37 237 aaPredicted RBP6.41□□□□□ -1.38
LINC00649-204ENST00000593977 PCDHGA4Q9Y5G9 962 aa6.41□□□□□ -1.38
LINC00649-204ENST00000593977 FER1L4A9Z1Z3 1794 aa6.41□□□□□ -1.38
LINC00649-204ENST00000593977 FOSBP53539 338 aa6.4□□□□□ -1.38
LINC00649-204ENST00000593977 TMEM259Q4ZIN3 620 aa6.4□□□□□ -1.38
LINC00649-204ENST00000593977 PADI6Q6TGC4 694 aa6.4□□□□□ -1.38
LINC00649-204ENST00000593977 POM121Q96HA1 1249 aa6.4□□□□□ -1.38
LINC00649-204ENST00000593977 AKNAQ7Z591 1439 aa6.4□□□□□ -1.39
LINC00649-204ENST00000593977 NEO1Q92859 1461 aa6.4□□□□□ -1.39
LINC00649-204ENST00000593977 FAM161AQ3B820 660 aa6.39□□□□□ -1.39
LINC00649-204ENST00000593977 C6orf132Q5T0Z8 1188 aa6.39□□□□□ -1.39
LINC00649-204ENST00000593977 TTC13Q8NBP0 860 aa6.39□□□□□ -1.39
LINC00649-204ENST00000593977 RBM46Q8TBY0 533 aaKnown RBP6.39□□□□□ -1.39
LINC00649-204ENST00000593977 TBC1D2Q9BYX2 928 aa6.39□□□□□ -1.39
LINC00649-204ENST00000593977 COG6Q9Y2V7 657 aa6.39□□□□□ -1.39
LINC00649-204ENST00000593977 RFC5P40937 340 aa6.38□□□□□ -1.39
LINC00649-204ENST00000593977 PPP2R2DQ66LE6 453 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms