RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 PPP2R1AP30153 589 aa16.07■□□□□ 0.16
NPC1-214ENST00000593280 MINK1Q8N4C8 1332 aaPredicted RBP16.07■□□□□ 0.16
NPC1-214ENST00000593280 ABCC11Q96J66 1382 aa16.06■□□□□ 0.16
NPC1-214ENST00000593280 SLC12A5Q9H2X9 1139 aa16.06■□□□□ 0.16
NPC1-214ENST00000593280 SLIT1O75093 1534 aa16.06■□□□□ 0.16
NPC1-214ENST00000593280 CPS1P31327 1500 aa16.06■□□□□ 0.16
NPC1-214ENST00000593280 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
NPC1-214ENST00000593280 ANKRD36BQ8N2N9 1353 aa16.06■□□□□ 0.16
NPC1-214ENST00000593280 CABP2Q9NPB3 220 aa16.05■□□□□ 0.16
NPC1-214ENST00000593280 INSRP06213 1382 aa16.05■□□□□ 0.16
NPC1-214ENST00000593280 METP08581 1390 aa16.05■□□□□ 0.16
NPC1-214ENST00000593280 SRPK2P78362 688 aaKnown RBP16.05■□□□□ 0.16
NPC1-214ENST00000593280 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
NPC1-214ENST00000593280 ARHGAP23Q9P227 1491 aa16.04■□□□□ 0.16
NPC1-214ENST00000593280 TECPR2O15040 1411 aa16.03■□□□□ 0.16
NPC1-214ENST00000593280 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
NPC1-214ENST00000593280 BCANQ96GW7 911 aa16.03■□□□□ 0.16
NPC1-214ENST00000593280 SUPT16HQ9Y5B9 1047 aaKnown RBP16.03■□□□□ 0.16
NPC1-214ENST00000593280 BLMP54132 1417 aaPredicted RBP16.03■□□□□ 0.16
NPC1-214ENST00000593280 NEFLP07196 543 aa16.02■□□□□ 0.16
NPC1-214ENST00000593280 ADAMTS13Q76LX8 1427 aa16.02■□□□□ 0.16
NPC1-214ENST00000593280 ADAMTSL3P82987 1691 aa16.02■□□□□ 0.15
NPC1-214ENST00000593280 PLEKHH1Q9ULM0 1364 aa16.01■□□□□ 0.15
NPC1-214ENST00000593280 FAM135BQ49AJ0 1406 aa16.01■□□□□ 0.15
NPC1-214ENST00000593280 CGNL1Q0VF96 1302 aa16.01■□□□□ 0.15
NPC1-214ENST00000593280 CEP170BQ9Y4F5 1589 aaPredicted RBP16.01■□□□□ 0.15
NPC1-214ENST00000593280 EID1Q9Y6B2 187 aa16.01■□□□□ 0.15
NPC1-214ENST00000593280 NSD2O96028 1365 aa16■□□□□ 0.15
NPC1-214ENST00000593280 SMG6Q86US8 1419 aaKnown RBP15.99■□□□□ 0.15
NPC1-214ENST00000593280 A0A1W2PP64 1363 aa15.99■□□□□ 0.15
NPC1-214ENST00000593280 LTKP29376 864 aa15.99■□□□□ 0.15
NPC1-214ENST00000593280 WAPLQ7Z5K2 1190 aa15.99■□□□□ 0.15
NPC1-214ENST00000593280 TXNDC2Q86VQ3 553 aa15.99■□□□□ 0.15
NPC1-214ENST00000593280 CDK19Q9BWU1 502 aa15.99■□□□□ 0.15
NPC1-214ENST00000593280 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
NPC1-214ENST00000593280 DIP2AQ14689 1571 aa15.99■□□□□ 0.15
NPC1-214ENST00000593280 SIRT1Q96EB6 747 aa15.98■□□□□ 0.15
NPC1-214ENST00000593280 ZNF142P52746 1687 aaPredicted RBP15.98■□□□□ 0.15
NPC1-214ENST00000593280 MED14O60244 1454 aa15.98■□□□□ 0.15
NPC1-214ENST00000593280 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
NPC1-214ENST00000593280 MORC1Q86VD1 984 aa15.97■□□□□ 0.15
NPC1-214ENST00000593280 KIF20BQ96Q89 1820 aa15.97■□□□□ 0.15
NPC1-214ENST00000593280 FKBP8Q14318 412 aa15.97■□□□□ 0.15
NPC1-214ENST00000593280 THEMISQ8N1K5 641 aaPredicted RBP15.97■□□□□ 0.15
NPC1-214ENST00000593280 TERF2IPQ9NYB0 399 aa15.97■□□□□ 0.15
NPC1-214ENST00000593280 CD163L1Q9NR16 1453 aa15.97■□□□□ 0.15
NPC1-214ENST00000593280 ADGRB2O60241 1585 aa15.96■□□□□ 0.14
NPC1-214ENST00000593280 ATP7BP35670 1465 aa15.95■□□□□ 0.14
NPC1-214ENST00000593280 SENP3-EIF4A1A0A087X0R7 540 aa15.94■□□□□ 0.14
NPC1-214ENST00000593280 HDGFL2Q7Z4V5 671 aaPredicted RBP15.94■□□□□ 0.14
NPC1-214ENST00000593280 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
NPC1-214ENST00000593280 ADAMTS8Q9UP79 889 aa15.93■□□□□ 0.14
NPC1-214ENST00000593280 POLR3AO14802 1390 aaPredicted RBP15.93■□□□□ 0.14
NPC1-214ENST00000593280 ROBO2Q9HCK4 1378 aa15.93■□□□□ 0.14
NPC1-214ENST00000593280 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
NPC1-214ENST00000593280 WASLO00401 505 aaPredicted RBP15.92■□□□□ 0.14
NPC1-214ENST00000593280 ITSN1Q15811 1721 aa15.91■□□□□ 0.14
NPC1-214ENST00000593280 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.91■□□□□ 0.14
NPC1-214ENST00000593280 PTPRUQ92729 1446 aa15.91■□□□□ 0.14
NPC1-214ENST00000593280 SLC26A8Q96RN1 970 aa15.9■□□□□ 0.14
NPC1-214ENST00000593280 CABP1Q9NZU7 370 aa15.9■□□□□ 0.14
NPC1-214ENST00000593280 CDC42BPGQ6DT37 1551 aa15.9■□□□□ 0.14
NPC1-214ENST00000593280 TNNT2P45379 298 aaPredicted RBP15.9■□□□□ 0.14
NPC1-214ENST00000593280 ILDR1Q86SU0 546 aaPredicted RBP15.9■□□□□ 0.14
NPC1-214ENST00000593280 TBX22Q9Y458 520 aa15.9■□□□□ 0.14
NPC1-214ENST00000593280 XRN1Q8IZH2 1706 aaKnown RBP15.9■□□□□ 0.14
NPC1-214ENST00000593280 PPIP5K1Q6PFW1 1433 aa15.89■□□□□ 0.13
NPC1-214ENST00000593280 AKAP12Q02952 1782 aa15.89■□□□□ 0.13
NPC1-214ENST00000593280 MON2Q7Z3U7 1717 aa15.89■□□□□ 0.13
NPC1-214ENST00000593280 PDE3BQ13370 1112 aa15.89■□□□□ 0.13
NPC1-214ENST00000593280 PTCH1Q13635 1447 aa15.89■□□□□ 0.13
NPC1-214ENST00000593280 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
NPC1-214ENST00000593280 SALL2Q9Y467 1007 aaPredicted RBP15.88■□□□□ 0.13
NPC1-214ENST00000593280 CPSF1Q10570 1443 aaKnown RBP15.86■□□□□ 0.13
NPC1-214ENST00000593280 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
NPC1-214ENST00000593280 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
NPC1-214ENST00000593280 EDC4Q6P2E9 1401 aaKnown RBP15.85■□□□□ 0.13
NPC1-214ENST00000593280 NUDT16Q96DE0 195 aaKnown RBP15.85■□□□□ 0.13
NPC1-214ENST00000593280 GGNBP2Q9H3C7 697 aa15.85■□□□□ 0.13
NPC1-214ENST00000593280 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
NPC1-214ENST00000593280 FYB1O15117 783 aa15.84■□□□□ 0.13
NPC1-214ENST00000593280 MTHFSP49914 203 aa15.84■□□□□ 0.13
NPC1-214ENST00000593280 CCDC61Q9Y6R9 512 aa15.83■□□□□ 0.13
NPC1-214ENST00000593280 PIK3R4Q99570 1358 aa15.83■□□□□ 0.12
NPC1-214ENST00000593280 IRX6P78412 446 aaPredicted RBP15.82■□□□□ 0.12
NPC1-214ENST00000593280 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
NPC1-214ENST00000593280 ERICH6BQ5W0A0 696 aa15.81■□□□□ 0.12
NPC1-214ENST00000593280 ANKLE2Q86XL3 938 aa15.81■□□□□ 0.12
NPC1-214ENST00000593280 PRR36Q9H6K5 1346 aa15.81■□□□□ 0.12
NPC1-214ENST00000593280 NRKQ7Z2Y5 1582 aa15.81■□□□□ 0.12
NPC1-214ENST00000593280 CHD2O14647 1828 aaKnown RBP15.8■□□□□ 0.12
NPC1-214ENST00000593280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.8■□□□□ 0.12
NPC1-214ENST00000593280 COL3A1P02461 1466 aaPredicted RBP15.79■□□□□ 0.12
NPC1-214ENST00000593280 PELP1Q8IZL8 1130 aaKnown RBP15.79■□□□□ 0.12
NPC1-214ENST00000593280 RNF123Q5XPI4 1314 aa15.78■□□□□ 0.12
NPC1-214ENST00000593280 NCKAP5LQ9HCH0 1330 aa15.78■□□□□ 0.12
NPC1-214ENST00000593280 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
NPC1-214ENST00000593280 NGEFQ8N5V2 710 aa15.78■□□□□ 0.12
NPC1-214ENST00000593280 CDCA7LQ96GN5 454 aa15.78■□□□□ 0.12
NPC1-214ENST00000593280 ZNF521Q96K83 1311 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms