RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 UBR1Q8IWV7 1749 aa8.61□□□□□ -1.03
ERCC1-216ENST00000592444 HNRNPMP52272 730 aaKnown RBP eCLIP8.61□□□□□ -1.03
ERCC1-216ENST00000592444 C14orf37Q86TY3 774 aa8.61□□□□□ -1.03
ERCC1-216ENST00000592444 CADPS2Q86UW7 1296 aa8.61□□□□□ -1.03
ERCC1-216ENST00000592444 ZBTB47Q9UFB7 747 aaPredicted RBP8.61□□□□□ -1.03
ERCC1-216ENST00000592444 CDK11AQ9UQ88 783 aaPredicted RBP8.61□□□□□ -1.03
ERCC1-216ENST00000592444 SLIT1O75093 1534 aa8.6□□□□□ -1.03
ERCC1-216ENST00000592444 SUPT5HO00267 1087 aaKnown RBP8.6□□□□□ -1.03
ERCC1-216ENST00000592444 ATF3P18847 181 aa8.6□□□□□ -1.03
ERCC1-216ENST00000592444 ZNF777Q9ULD5 760 aaPredicted RBP8.6□□□□□ -1.03
ERCC1-216ENST00000592444 ATP1B4Q9UN42 357 aaPredicted RBP8.6□□□□□ -1.03
ERCC1-216ENST00000592444 PREX2Q70Z35 1606 aa8.58□□□□□ -1.04
ERCC1-216ENST00000592444 INO80Q9ULG1 1556 aaPredicted RBP8.58□□□□□ -1.04
ERCC1-216ENST00000592444 KIF3BO15066 747 aa8.58□□□□□ -1.04
ERCC1-216ENST00000592444 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
ERCC1-216ENST00000592444 TRPC6Q9Y210 931 aa8.58□□□□□ -1.04
ERCC1-216ENST00000592444 BRWD3Q6RI45 1802 aa8.58□□□□□ -1.04
ERCC1-216ENST00000592444 CHD4Q14839 1912 aa8.58□□□□□ -1.04
ERCC1-216ENST00000592444 PRXQ9BXM0 1461 aa8.57□□□□□ -1.04
ERCC1-216ENST00000592444 TROQ12816 1431 aaPredicted RBP8.57□□□□□ -1.04
ERCC1-216ENST00000592444 POTEFA5A3E0 1075 aa8.57□□□□□ -1.04
ERCC1-216ENST00000592444 NUBP1P53384 320 aa8.57□□□□□ -1.04
ERCC1-216ENST00000592444 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
ERCC1-216ENST00000592444 DDX17Q92841 729 aaKnown RBP8.57□□□□□ -1.04
ERCC1-216ENST00000592444 SPON1Q9HCB6 807 aa8.57□□□□□ -1.04
ERCC1-216ENST00000592444 SYCP2Q9BX26 1530 aa8.57□□□□□ -1.04
ERCC1-216ENST00000592444 CAMSAP2Q08AD1 1489 aa8.57□□□□□ -1.04
ERCC1-216ENST00000592444 RALGAPBQ86X10 1494 aa8.57□□□□□ -1.04
ERCC1-216ENST00000592444 TTLL13PA6NNM8 815 aa8.56□□□□□ -1.04
ERCC1-216ENST00000592444 HSPA6P17066 643 aa8.56□□□□□ -1.04
ERCC1-216ENST00000592444 C19orf44Q9H6X5 657 aa8.56□□□□□ -1.04
ERCC1-216ENST00000592444 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.56□□□□□ -1.04
ERCC1-216ENST00000592444 CLIP1P30622 1438 aa8.55□□□□□ -1.04
ERCC1-216ENST00000592444 KCNQ2O43526 872 aa8.55□□□□□ -1.04
ERCC1-216ENST00000592444 EZH2Q15910 746 aaKnown RBP8.55□□□□□ -1.04
ERCC1-216ENST00000592444 IER5LQ5T953 404 aa8.55□□□□□ -1.04
ERCC1-216ENST00000592444 SEPT12Q8IYM1 358 aa8.55□□□□□ -1.04
ERCC1-216ENST00000592444 SGIP1Q9BQI5 828 aa8.55□□□□□ -1.04
ERCC1-216ENST00000592444 TET3O43151 1660 aa8.55□□□□□ -1.04
ERCC1-216ENST00000592444 ASXL1Q8IXJ9 1541 aa8.54□□□□□ -1.04
ERCC1-216ENST00000592444 MROH1Q8NDA8 1641 aa8.54□□□□□ -1.04
ERCC1-216ENST00000592444 SPHKAPQ2M3C7 1700 aa8.54□□□□□ -1.04
ERCC1-216ENST00000592444 KRT27Q7Z3Y8 459 aa8.54□□□□□ -1.04
ERCC1-216ENST00000592444 PCDHB13Q9Y5F0 798 aa8.54□□□□□ -1.04
ERCC1-216ENST00000592444 PTCH1Q13635 1447 aa8.54□□□□□ -1.04
ERCC1-216ENST00000592444 ERVK-7P63135 1459 aa8.53□□□□□ -1.04
ERCC1-216ENST00000592444 DHX29Q7Z478 1369 aaKnown RBP8.53□□□□□ -1.04
ERCC1-216ENST00000592444 TMEM2Q9UHN6 1383 aa8.53□□□□□ -1.04
ERCC1-216ENST00000592444 BCANQ96GW7 911 aa8.53□□□□□ -1.04
ERCC1-216ENST00000592444 TRIM35Q9UPQ4 493 aa8.53□□□□□ -1.04
ERCC1-216ENST00000592444 COLQQ9Y215 455 aaPredicted RBP8.53□□□□□ -1.04
ERCC1-216ENST00000592444 NCOA3Q9Y6Q9 1424 aa8.53□□□□□ -1.04
ERCC1-216ENST00000592444 GLI3P10071 1580 aa8.52□□□□□ -1.04
ERCC1-216ENST00000592444 ARHGAP35Q9NRY4 1499 aa8.52□□□□□ -1.05
ERCC1-216ENST00000592444 FBXO3Q9UK99 471 aa8.52□□□□□ -1.05
ERCC1-216ENST00000592444 GPATCH8Q9UKJ3 1502 aaKnown RBP8.52□□□□□ -1.05
ERCC1-216ENST00000592444 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
ERCC1-216ENST00000592444 FAM212AQ96EL1 285 aa8.5□□□□□ -1.05
ERCC1-216ENST00000592444 CDC42BPAQ5VT25 1732 aa8.49□□□□□ -1.05
ERCC1-216ENST00000592444 CFAP65Q6ZU64 1925 aaKnown RBP8.49□□□□□ -1.05
ERCC1-216ENST00000592444 CHD2O14647 1828 aaKnown RBP8.48□□□□□ -1.05
ERCC1-216ENST00000592444 FAM83GA6ND36 823 aa8.48□□□□□ -1.05
ERCC1-216ENST00000592444 UNC5CLQ8IV45 518 aa8.48□□□□□ -1.05
ERCC1-216ENST00000592444 SLAIN1Q8ND83 568 aa8.48□□□□□ -1.05
ERCC1-216ENST00000592444 CAMKK2Q96RR4 588 aa8.48□□□□□ -1.05
ERCC1-216ENST00000592444 PPP1R15AO75807 674 aaPredicted RBP8.47□□□□□ -1.05
ERCC1-216ENST00000592444 PLCG2P16885 1265 aa8.47□□□□□ -1.05
ERCC1-216ENST00000592444 DISP2A7MBM2 1401 aa8.46□□□□□ -1.05
ERCC1-216ENST00000592444 KIAA1107Q9UPP5 1409 aa8.46□□□□□ -1.05
ERCC1-216ENST00000592444 RGPD1P0DJD0 1748 aa8.46□□□□□ -1.05
ERCC1-216ENST00000592444 MST1RQ04912 1400 aa8.46□□□□□ -1.06
ERCC1-216ENST00000592444 ONECUT3O60422 494 aaPredicted RBP8.45□□□□□ -1.06
ERCC1-216ENST00000592444 NBPF8Q3BBV2 869 aa8.45□□□□□ -1.06
ERCC1-216ENST00000592444 FAM182BQ5T319 152 aa8.45□□□□□ -1.06
ERCC1-216ENST00000592444 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
ERCC1-216ENST00000592444 DNAJC5GQ8N7S2 189 aa8.45□□□□□ -1.06
ERCC1-216ENST00000592444 TMEM106CQ9BVX2 250 aa8.45□□□□□ -1.06
ERCC1-216ENST00000592444 SHANK3Q9BYB0 1731 aa8.45□□□□□ -1.06
ERCC1-216ENST00000592444 PIK3C2BO00750 1634 aa8.44□□□□□ -1.06
ERCC1-216ENST00000592444 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.44□□□□□ -1.06
ERCC1-216ENST00000592444 A0A0G2JS52 829 aa8.44□□□□□ -1.06
ERCC1-216ENST00000592444 MYT1Q01538 1121 aa8.44□□□□□ -1.06
ERCC1-216ENST00000592444 IFNL1Q8IU54 200 aa8.44□□□□□ -1.06
ERCC1-216ENST00000592444 SYT17Q9BSW7 474 aa8.44□□□□□ -1.06
ERCC1-216ENST00000592444 WWC3Q9ULE0 1092 aa8.44□□□□□ -1.06
ERCC1-216ENST00000592444 NRKQ7Z2Y5 1582 aa8.44□□□□□ -1.06
ERCC1-216ENST00000592444 DCAF8Q5TAQ9 597 aa8.43□□□□□ -1.06
ERCC1-216ENST00000592444 FHDC1Q9C0D6 1143 aaPredicted RBP8.43□□□□□ -1.06
ERCC1-216ENST00000592444 PLEKHH2Q8IVE3 1493 aa8.43□□□□□ -1.06
ERCC1-216ENST00000592444 ST18O60284 1047 aa8.42□□□□□ -1.06
ERCC1-216ENST00000592444 MYOM2P54296 1465 aa8.42□□□□□ -1.06
ERCC1-216ENST00000592444 EFCAB6Q5THR3 1501 aa8.42□□□□□ -1.06
ERCC1-216ENST00000592444 TNS1Q9HBL0 1735 aaKnown RBP8.42□□□□□ -1.06
ERCC1-216ENST00000592444 DCCP43146 1447 aa8.41□□□□□ -1.06
ERCC1-216ENST00000592444 SOS2Q07890 1332 aaPredicted RBP8.41□□□□□ -1.06
ERCC1-216ENST00000592444 VASPP50552 380 aaPredicted RBP8.41□□□□□ -1.06
ERCC1-216ENST00000592444 CCDC9Q9Y3X0 531 aaKnown RBP8.41□□□□□ -1.06
ERCC1-216ENST00000592444 PCNTO95613 3336 aa8.41□□□□□ -1.06
ERCC1-216ENST00000592444 GOLGB1Q14789 3259 aaKnown RBP8.41□□□□□ -1.06
ERCC1-216ENST00000592444 MARF1Q9Y4F3 1742 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms