RNA–Protein interactions for RNA: ENST00000592423.1

RDH13-220, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 2,811 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-220ENST00000592423 DUOX2Q9NRD8 1548 aa16.05■□□□□ 0.16
RDH13-220ENST00000592423 FSD2A1L4K1 749 aa16.05■□□□□ 0.16
RDH13-220ENST00000592423 RUNDC1Q96C34 613 aa16.05■□□□□ 0.16
RDH13-220ENST00000592423 KDM5AP29375 1690 aaKnown RBP16.04■□□□□ 0.16
RDH13-220ENST00000592423 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
RDH13-220ENST00000592423 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
RDH13-220ENST00000592423 GLI2P10070 1586 aa16.04■□□□□ 0.16
RDH13-220ENST00000592423 NINLQ9Y2I6 1382 aa16.04■□□□□ 0.16
RDH13-220ENST00000592423 MTHFSP49914 203 aa16.03■□□□□ 0.16
RDH13-220ENST00000592423 CEP152O94986 1710 aa16.03■□□□□ 0.16
RDH13-220ENST00000592423 CHMP5Q9NZZ3 219 aa16.03■□□□□ 0.16
RDH13-220ENST00000592423 TRAPPC8Q9Y2L5 1435 aa16.02■□□□□ 0.16
RDH13-220ENST00000592423 FOXD4L1Q9NU39 408 aa16.02■□□□□ 0.16
RDH13-220ENST00000592423 MVPQ14764 893 aaKnown RBP16.02■□□□□ 0.15
RDH13-220ENST00000592423 SENP3Q9H4L4 574 aaPredicted RBP16.02■□□□□ 0.15
RDH13-220ENST00000592423 TRAK1Q9UPV9 953 aa16.02■□□□□ 0.15
RDH13-220ENST00000592423 ZCCHC11Q5TAX3 1644 aaKnown RBP16.02■□□□□ 0.15
RDH13-220ENST00000592423 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.15
RDH13-220ENST00000592423 PLXNC1O60486 1568 aa16.01■□□□□ 0.15
RDH13-220ENST00000592423 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
RDH13-220ENST00000592423 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
RDH13-220ENST00000592423 POLR3AO14802 1390 aaPredicted RBP16.01■□□□□ 0.15
RDH13-220ENST00000592423 SPHKAPQ2M3C7 1700 aa16.01■□□□□ 0.15
RDH13-220ENST00000592423 ITPRIPQ8IWB1 547 aa16■□□□□ 0.15
RDH13-220ENST00000592423 SCAPERQ9BY12 1400 aa16■□□□□ 0.15
RDH13-220ENST00000592423 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
RDH13-220ENST00000592423 U2AF1L5P0DN76 240 aaPredicted RBP16■□□□□ 0.15
RDH13-220ENST00000592423 U2AF1Q01081 240 aaKnown RBP eCLIP16■□□□□ 0.15
RDH13-220ENST00000592423 DZIP1LQ8IYY4 767 aaKnown RBP16■□□□□ 0.15
RDH13-220ENST00000592423 ERBB4Q15303 1308 aa15.99■□□□□ 0.15
RDH13-220ENST00000592423 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
RDH13-220ENST00000592423 ZKSCAN2Q63HK3 967 aa15.99■□□□□ 0.15
RDH13-220ENST00000592423 SMC4Q9NTJ3 1288 aa15.99■□□□□ 0.15
RDH13-220ENST00000592423 RTEL1-TNFRSF6BF6WH68 1400 aa15.98■□□□□ 0.15
RDH13-220ENST00000592423 SPAG9O60271 1321 aaKnown RBP15.98■□□□□ 0.15
RDH13-220ENST00000592423 CLCN1P35523 988 aa15.98■□□□□ 0.15
RDH13-220ENST00000592423 HSCBQ8IWL3 235 aa15.98■□□□□ 0.15
RDH13-220ENST00000592423 GRPEL1Q9HAV7 217 aa15.98■□□□□ 0.15
RDH13-220ENST00000592423 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
RDH13-220ENST00000592423 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
RDH13-220ENST00000592423 KIF3BO15066 747 aa15.97■□□□□ 0.15
RDH13-220ENST00000592423 EXOSC9Q06265 439 aaKnown RBP15.97■□□□□ 0.15
RDH13-220ENST00000592423 TMEM132EQ6IEE7 984 aa15.97■□□□□ 0.15
RDH13-220ENST00000592423 WDR63Q8IWG1 891 aa15.97■□□□□ 0.15
RDH13-220ENST00000592423 TRIM27P14373 513 aa15.96■□□□□ 0.15
RDH13-220ENST00000592423 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.15
RDH13-220ENST00000592423 KCNA4P22459 653 aa15.96■□□□□ 0.15
RDH13-220ENST00000592423 MRE11P49959 708 aa15.96■□□□□ 0.15
RDH13-220ENST00000592423 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
RDH13-220ENST00000592423 SHPRHQ149N8 1683 aa15.96■□□□□ 0.15
RDH13-220ENST00000592423 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
RDH13-220ENST00000592423 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
RDH13-220ENST00000592423 TRPM2O94759 1503 aa15.95■□□□□ 0.14
RDH13-220ENST00000592423 LNPKQ9C0E8 428 aa15.95■□□□□ 0.14
RDH13-220ENST00000592423 HSP90AA1P07900 732 aaKnown RBP15.95■□□□□ 0.14
RDH13-220ENST00000592423 SSH1Q8WYL5 1049 aa15.95■□□□□ 0.14
RDH13-220ENST00000592423 U2SURPO15042 1029 aaKnown RBP15.94■□□□□ 0.14
RDH13-220ENST00000592423 HSP90AA2PQ14568 343 aaPredicted RBP15.94■□□□□ 0.14
RDH13-220ENST00000592423 TNPO1Q92973 898 aaKnown RBP15.94■□□□□ 0.14
RDH13-220ENST00000592423 ESPNB1AK53 854 aa15.93■□□□□ 0.14
RDH13-220ENST00000592423 CYB5RLQ6IPT4 315 aa15.93■□□□□ 0.14
RDH13-220ENST00000592423 NOB1Q9ULX3 412 aaKnown RBP15.93■□□□□ 0.14
RDH13-220ENST00000592423 DIP2BQ9P265 1576 aa15.93■□□□□ 0.14
RDH13-220ENST00000592423 IQSEC2Q5JU85 1478 aa15.93■□□□□ 0.14
RDH13-220ENST00000592423 NUTM2DQ5VT03 806 aaPredicted RBP15.92■□□□□ 0.14
RDH13-220ENST00000592423 TMEM57Q8N5G2 664 aa15.92■□□□□ 0.14
RDH13-220ENST00000592423 AAMPQ13685 434 aa15.92■□□□□ 0.14
RDH13-220ENST00000592423 CFAP53Q96M91 514 aa15.92■□□□□ 0.14
RDH13-220ENST00000592423 PTPRTO14522 1441 aa15.91■□□□□ 0.14
RDH13-220ENST00000592423 ABCA6Q8N139 1617 aa15.91■□□□□ 0.14
RDH13-220ENST00000592423 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
RDH13-220ENST00000592423 SAFB2Q14151 953 aaKnown RBP eCLIP15.91■□□□□ 0.14
RDH13-220ENST00000592423 DDX11L8A8MPP1 907 aa15.91■□□□□ 0.14
RDH13-220ENST00000592423 CD2BP2O95400 341 aaKnown RBP15.91■□□□□ 0.14
RDH13-220ENST00000592423 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
RDH13-220ENST00000592423 TRIM44Q96DX7 344 aaPredicted RBP15.9■□□□□ 0.14
RDH13-220ENST00000592423 KIF13AQ9H1H9 1805 aa15.9■□□□□ 0.14
RDH13-220ENST00000592423 PLCH2O75038 1416 aa15.89■□□□□ 0.13
RDH13-220ENST00000592423 ATF7IPQ6VMQ6 1270 aa15.89■□□□□ 0.13
RDH13-220ENST00000592423 STAC3Q96MF2 364 aa15.89■□□□□ 0.13
RDH13-220ENST00000592423 MAP3K4Q9Y6R4 1608 aa15.88■□□□□ 0.13
RDH13-220ENST00000592423 ZMYM3Q14202 1370 aa15.88■□□□□ 0.13
RDH13-220ENST00000592423 PKNOX2Q96KN3 472 aa15.88■□□□□ 0.13
RDH13-220ENST00000592423 C1orf115Q9H7X2 142 aa15.88■□□□□ 0.13
RDH13-220ENST00000592423 DDX19BQ9UMR2 479 aa15.88■□□□□ 0.13
RDH13-220ENST00000592423 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
RDH13-220ENST00000592423 HDAC1Q13547 482 aaPredicted RBP15.87■□□□□ 0.13
RDH13-220ENST00000592423 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
RDH13-220ENST00000592423 SMC5Q8IY18 1101 aa15.87■□□□□ 0.13
RDH13-220ENST00000592423 ABCA9Q8IUA7 1624 aa15.87■□□□□ 0.13
RDH13-220ENST00000592423 ARAP3Q8WWN8 1544 aa15.87■□□□□ 0.13
RDH13-220ENST00000592423 ZNF518AQ6AHZ1 1483 aa15.87■□□□□ 0.13
RDH13-220ENST00000592423 ZMYND15Q9H091 742 aa15.86■□□□□ 0.13
RDH13-220ENST00000592423 NOS1P29475 1434 aa15.86■□□□□ 0.13
RDH13-220ENST00000592423 KANK1Q14678 1352 aa15.86■□□□□ 0.13
RDH13-220ENST00000592423 DDIT3P35638 169 aa15.86■□□□□ 0.13
RDH13-220ENST00000592423 GLIPR1L2Q4G1C9 344 aa15.86■□□□□ 0.13
RDH13-220ENST00000592423 ASXL2Q76L83 1435 aa15.86■□□□□ 0.13
RDH13-220ENST00000592423 ABCC1P33527 1531 aa15.85■□□□□ 0.13
RDH13-220ENST00000592423 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms