RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 MINK1Q8N4C8 1332 aaPredicted RBP29.95■■■□□ 2.39
RUNDC3A-205ENST00000590834 METP08581 1390 aa29.94■■■□□ 2.38
RUNDC3A-205ENST00000590834 ABCC11Q96J66 1382 aa29.93■■■□□ 2.38
RUNDC3A-205ENST00000590834 SENP3-EIF4A1A0A087X0R7 540 aa29.91■■■□□ 2.38
RUNDC3A-205ENST00000590834 ANKRD36BQ8N2N9 1353 aa29.9■■■□□ 2.38
RUNDC3A-205ENST00000590834 SRPK2P78362 688 aaKnown RBP29.9■■■□□ 2.38
RUNDC3A-205ENST00000590834 USP32Q8NFA0 1604 aa29.9■■■□□ 2.38
RUNDC3A-205ENST00000590834 INSRP06213 1382 aa29.89■■■□□ 2.38
RUNDC3A-205ENST00000590834 FKBP8Q14318 412 aa29.89■■■□□ 2.37
RUNDC3A-205ENST00000590834 PLEKHH1Q9ULM0 1364 aa29.88■■■□□ 2.37
RUNDC3A-205ENST00000590834 WAPLQ7Z5K2 1190 aa29.88■■■□□ 2.37
RUNDC3A-205ENST00000590834 PLPPR3Q6T4P5 718 aa29.88■■■□□ 2.37
RUNDC3A-205ENST00000590834 NINLQ9Y2I6 1382 aa29.87■■■□□ 2.37
RUNDC3A-205ENST00000590834 ATAD2Q6PL18 1390 aa29.86■■■□□ 2.37
RUNDC3A-205ENST00000590834 BLMP54132 1417 aaPredicted RBP29.86■■■□□ 2.37
RUNDC3A-205ENST00000590834 LTKP29376 864 aa29.86■■■□□ 2.37
RUNDC3A-205ENST00000590834 ADAMTS13Q76LX8 1427 aa29.84■■■□□ 2.37
RUNDC3A-205ENST00000590834 KNDC1Q76NI1 1749 aa29.84■■■□□ 2.37
RUNDC3A-205ENST00000590834 NEFLP07196 543 aa29.83■■■□□ 2.37
RUNDC3A-205ENST00000590834 CDK19Q9BWU1 502 aa29.83■■■□□ 2.37
RUNDC3A-205ENST00000590834 SMG6Q86US8 1419 aaKnown RBP29.83■■■□□ 2.37
RUNDC3A-205ENST00000590834 PLEKHG1Q9ULL1 1385 aa29.83■■■□□ 2.37
RUNDC3A-205ENST00000590834 TECPR2O15040 1411 aa29.82■■■□□ 2.36
RUNDC3A-205ENST00000590834 BCANQ96GW7 911 aa29.82■■■□□ 2.36
RUNDC3A-205ENST00000590834 SLIT1O75093 1534 aa29.82■■■□□ 2.36
RUNDC3A-205ENST00000590834 A0A1W2PP64 1363 aa29.81■■■□□ 2.36
RUNDC3A-205ENST00000590834 ARHGAP23Q9P227 1491 aa29.81■■■□□ 2.36
RUNDC3A-205ENST00000590834 CGNL1Q0VF96 1302 aa29.8■■■□□ 2.36
RUNDC3A-205ENST00000590834 ADAMTS8Q9UP79 889 aa29.8■■■□□ 2.36
RUNDC3A-205ENST00000590834 TXNDC2Q86VQ3 553 aa29.79■■■□□ 2.36
RUNDC3A-205ENST00000590834 CD163L1Q9NR16 1453 aa29.79■■■□□ 2.36
RUNDC3A-205ENST00000590834 CPS1P31327 1500 aa29.78■■■□□ 2.36
RUNDC3A-205ENST00000590834 FAM135BQ49AJ0 1406 aa29.78■■■□□ 2.36
RUNDC3A-205ENST00000590834 MORC1Q86VD1 984 aa29.77■■■□□ 2.36
RUNDC3A-205ENST00000590834 SIRT1Q96EB6 747 aa29.77■■■□□ 2.36
RUNDC3A-205ENST00000590834 NUDCQ9Y266 331 aa29.77■■■□□ 2.36
RUNDC3A-205ENST00000590834 RIMS1Q86UR5 1692 aaKnown RBP29.76■■■□□ 2.35
RUNDC3A-205ENST00000590834 MED14O60244 1454 aa29.75■■■□□ 2.35
RUNDC3A-205ENST00000590834 WDR43Q15061 677 aaKnown RBP eCLIP29.75■■■□□ 2.35
RUNDC3A-205ENST00000590834 EID1Q9Y6B2 187 aa29.75■■■□□ 2.35
RUNDC3A-205ENST00000590834 NSD2O96028 1365 aa29.74■■■□□ 2.35
RUNDC3A-205ENST00000590834 THEMISQ8N1K5 641 aaPredicted RBP29.72■■■□□ 2.35
RUNDC3A-205ENST00000590834 TERF2IPQ9NYB0 399 aa29.72■■■□□ 2.35
RUNDC3A-205ENST00000590834 SALL2Q9Y467 1007 aaPredicted RBP29.71■■■□□ 2.35
RUNDC3A-205ENST00000590834 POLR3AO14802 1390 aaPredicted RBP29.7■■■□□ 2.35
RUNDC3A-205ENST00000590834 CABP1Q9NZU7 370 aa29.7■■■□□ 2.35
RUNDC3A-205ENST00000590834 ROBO2Q9HCK4 1378 aa29.69■■■□□ 2.34
RUNDC3A-205ENST00000590834 WASLO00401 505 aaPredicted RBP29.69■■■□□ 2.34
RUNDC3A-205ENST00000590834 ADAMTSL3P82987 1691 aa29.69■■■□□ 2.34
RUNDC3A-205ENST00000590834 TNNT2P45379 298 aaPredicted RBP29.69■■■□□ 2.34
RUNDC3A-205ENST00000590834 SLC26A8Q96RN1 970 aa29.68■■■□□ 2.34
RUNDC3A-205ENST00000590834 CEP170BQ9Y4F5 1589 aaPredicted RBP29.67■■■□□ 2.34
RUNDC3A-205ENST00000590834 PTPRUQ92729 1446 aa29.66■■■□□ 2.34
RUNDC3A-205ENST00000590834 HDGFL2Q7Z4V5 671 aaPredicted RBP29.65■■■□□ 2.34
RUNDC3A-205ENST00000590834 ATP7BP35670 1465 aa29.64■■■□□ 2.34
RUNDC3A-205ENST00000590834 PDE3BQ13370 1112 aa29.63■■■□□ 2.33
RUNDC3A-205ENST00000590834 IRX6P78412 446 aaPredicted RBP29.63■■■□□ 2.33
RUNDC3A-205ENST00000590834 TBX22Q9Y458 520 aa29.62■■■□□ 2.33
RUNDC3A-205ENST00000590834 FYB1O15117 783 aa29.61■■■□□ 2.33
RUNDC3A-205ENST00000590834 SHPRHQ149N8 1683 aa29.61■■■□□ 2.33
RUNDC3A-205ENST00000590834 ANKRD26Q9UPS8 1709 aa29.61■■■□□ 2.33
RUNDC3A-205ENST00000590834 GGNBP2Q9H3C7 697 aa29.6■■■□□ 2.33
RUNDC3A-205ENST00000590834 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.6■■■□□ 2.33
RUNDC3A-205ENST00000590834 MTHFSP49914 203 aa29.59■■■□□ 2.33
RUNDC3A-205ENST00000590834 DIP2AQ14689 1571 aa29.59■■■□□ 2.33
RUNDC3A-205ENST00000590834 PPIP5K1Q6PFW1 1433 aa29.58■■■□□ 2.33
RUNDC3A-205ENST00000590834 ADGRB2O60241 1585 aa29.58■■■□□ 2.33
RUNDC3A-205ENST00000590834 NUDT16Q96DE0 195 aaKnown RBP29.57■■■□□ 2.32
RUNDC3A-205ENST00000590834 CDCA7LQ96GN5 454 aa29.56■■■□□ 2.32
RUNDC3A-205ENST00000590834 CPSF1Q10570 1443 aaKnown RBP29.56■■■□□ 2.32
RUNDC3A-205ENST00000590834 KIF20BQ96Q89 1820 aa29.55■■■□□ 2.32
RUNDC3A-205ENST00000590834 CCDC146Q8IYE0 955 aa29.55■■■□□ 2.32
RUNDC3A-205ENST00000590834 ZNF142P52746 1687 aaPredicted RBP29.55■■■□□ 2.32
RUNDC3A-205ENST00000590834 AMOTL2Q9Y2J4 779 aa29.55■■■□□ 2.32
RUNDC3A-205ENST00000590834 RNF123Q5XPI4 1314 aa29.54■■■□□ 2.32
RUNDC3A-205ENST00000590834 NCKAP5LQ9HCH0 1330 aa29.53■■■□□ 2.32
RUNDC3A-205ENST00000590834 CCDC61Q9Y6R9 512 aa29.53■■■□□ 2.32
RUNDC3A-205ENST00000590834 PRR36Q9H6K5 1346 aa29.52■■■□□ 2.32
RUNDC3A-205ENST00000590834 PTCH1Q13635 1447 aa29.52■■■□□ 2.32
RUNDC3A-205ENST00000590834 CDC42BPGQ6DT37 1551 aa29.51■■■□□ 2.32
RUNDC3A-205ENST00000590834 ZNF521Q96K83 1311 aa29.51■■■□□ 2.31
RUNDC3A-205ENST00000590834 CFAP53Q96M91 514 aa29.5■■■□□ 2.31
RUNDC3A-205ENST00000590834 ERICH6BQ5W0A0 696 aa29.49■■■□□ 2.31
RUNDC3A-205ENST00000590834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.48■■■□□ 2.31
RUNDC3A-205ENST00000590834 XRN1Q8IZH2 1706 aaKnown RBP29.48■■■□□ 2.31
RUNDC3A-205ENST00000590834 EDC4Q6P2E9 1401 aaKnown RBP29.48■■■□□ 2.31
RUNDC3A-205ENST00000590834 APAF1O14727 1248 aa29.47■■■□□ 2.31
RUNDC3A-205ENST00000590834 MON2Q7Z3U7 1717 aa29.46■■■□□ 2.31
RUNDC3A-205ENST00000590834 SETD1BQ9UPS6 1966 aaKnown RBP29.45■■■□□ 2.31
RUNDC3A-205ENST00000590834 AKAP12Q02952 1782 aa29.45■■■□□ 2.3
RUNDC3A-205ENST00000590834 TOPAZ1Q8N9V7 1692 aa29.45■■■□□ 2.3
RUNDC3A-205ENST00000590834 ITSN1Q15811 1721 aa29.43■■■□□ 2.3
RUNDC3A-205ENST00000590834 COL3A1P02461 1466 aaPredicted RBP29.43■■■□□ 2.3
RUNDC3A-205ENST00000590834 PIK3R4Q99570 1358 aa29.42■■■□□ 2.3
RUNDC3A-205ENST00000590834 ANKLE2Q86XL3 938 aa29.42■■■□□ 2.3
RUNDC3A-205ENST00000590834 RCAN3Q9UKA8 241 aa29.41■■■□□ 2.3
RUNDC3A-205ENST00000590834 GOLGA2Q08379 1002 aa29.38■■■□□ 2.29
RUNDC3A-205ENST00000590834 KCNA6P17658 529 aa29.38■■■□□ 2.29
RUNDC3A-205ENST00000590834 NME9Q86XW9 330 aa29.38■■■□□ 2.29
RUNDC3A-205ENST00000590834 ZNF692Q9BU19 519 aaPredicted RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms