RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 DAXXQ9UER7 740 aaPredicted RBP24.81■■□□□ 1.56
MBD3-207ENST00000590550 NRXN1Q9ULB1 1477 aa24.8■■□□□ 1.56
MBD3-207ENST00000590550 C14orf93Q9H972 538 aaKnown RBP24.8■■□□□ 1.56
MBD3-207ENST00000590550 SLC24A1O60721 1099 aa24.8■■□□□ 1.56
MBD3-207ENST00000590550 NPM1P06748 294 aaKnown RBP eCLIP24.8■■□□□ 1.56
MBD3-207ENST00000590550 FAM43AQ8N2R8 423 aa24.8■■□□□ 1.56
MBD3-207ENST00000590550 PANK1Q8TE04 598 aa24.8■■□□□ 1.56
MBD3-207ENST00000590550 NEURL4Q96JN8 1562 aa24.79■■□□□ 1.56
MBD3-207ENST00000590550 C8orf34Q49A92 452 aa24.79■■□□□ 1.56
MBD3-207ENST00000590550 ADGRB3O60242 1522 aa24.78■■□□□ 1.56
MBD3-207ENST00000590550 RAPGEF3O95398 923 aa24.78■■□□□ 1.56
MBD3-207ENST00000590550 IGHDP01880 384 aa24.78■■□□□ 1.56
MBD3-207ENST00000590550 CANXP27824 592 aaKnown RBP24.77■■□□□ 1.56
MBD3-207ENST00000590550 COG6Q9Y2V7 657 aa24.77■■□□□ 1.56
MBD3-207ENST00000590550 MTHFSP49914 203 aa24.76■■□□□ 1.56
MBD3-207ENST00000590550 POLR3AO14802 1390 aaPredicted RBP24.76■■□□□ 1.55
MBD3-207ENST00000590550 SBNO2Q9Y2G9 1366 aa24.76■■□□□ 1.55
MBD3-207ENST00000590550 CD109Q6YHK3 1445 aa24.76■■□□□ 1.55
MBD3-207ENST00000590550 BCL2L13Q9BXK5 485 aa24.76■■□□□ 1.55
MBD3-207ENST00000590550 FAM161AQ3B820 660 aa24.75■■□□□ 1.55
MBD3-207ENST00000590550 TCP11L2Q8N4U5 519 aa24.75■■□□□ 1.55
MBD3-207ENST00000590550 FRAT2O75474 233 aaPredicted RBP24.74■■□□□ 1.55
MBD3-207ENST00000590550 FRMPD1Q5SYB0 1578 aa24.74■■□□□ 1.55
MBD3-207ENST00000590550 VSIG10Q8N0Z9 540 aa24.73■■□□□ 1.55
MBD3-207ENST00000590550 TNNQ9UQP3 1299 aa24.73■■□□□ 1.55
MBD3-207ENST00000590550 LMTK2Q8IWU2 1503 aa24.73■■□□□ 1.55
MBD3-207ENST00000590550 CABP2Q9NPB3 220 aa24.72■■□□□ 1.55
MBD3-207ENST00000590550 MYO3AQ8NEV4 1616 aa24.72■■□□□ 1.55
MBD3-207ENST00000590550 POGZQ7Z3K3 1410 aa24.72■■□□□ 1.55
MBD3-207ENST00000590550 QRICH2Q9H0J4 1663 aa24.71■■□□□ 1.55
MBD3-207ENST00000590550 ADGRB1O14514 1584 aa24.71■■□□□ 1.55
MBD3-207ENST00000590550 STK26Q9P289 416 aa24.71■■□□□ 1.55
MBD3-207ENST00000590550 RUNDC1Q96C34 613 aa24.7■■□□□ 1.54
MBD3-207ENST00000590550 GLIPR1L2Q4G1C9 344 aa24.69■■□□□ 1.54
MBD3-207ENST00000590550 PPLO60437 1756 aa24.68■■□□□ 1.54
MBD3-207ENST00000590550 SETBP1Q9Y6X0 1596 aa24.67■■□□□ 1.54
MBD3-207ENST00000590550 ZMYND15Q9H091 742 aa24.67■■□□□ 1.54
MBD3-207ENST00000590550 CGNL1Q0VF96 1302 aa24.67■■□□□ 1.54
MBD3-207ENST00000590550 SHPRHQ149N8 1683 aa24.67■■□□□ 1.54
MBD3-207ENST00000590550 CLUAP1Q96AJ1 413 aa24.66■■□□□ 1.54
MBD3-207ENST00000590550 RLBP1P12271 317 aa24.65■■□□□ 1.54
MBD3-207ENST00000590550 U2AF1L5P0DN76 240 aaPredicted RBP24.65■■□□□ 1.54
MBD3-207ENST00000590550 U2AF1Q01081 240 aaKnown RBP eCLIP24.65■■□□□ 1.54
MBD3-207ENST00000590550 RARSP54136 660 aaKnown RBP24.64■■□□□ 1.54
MBD3-207ENST00000590550 ABCC3O15438 1527 aa24.64■■□□□ 1.53
MBD3-207ENST00000590550 PDE3AQ14432 1141 aa24.64■■□□□ 1.53
MBD3-207ENST00000590550 RRAGDQ9NQL2 400 aaPredicted RBP24.63■■□□□ 1.53
MBD3-207ENST00000590550 MLH3Q9UHC1 1453 aa24.62■■□□□ 1.53
MBD3-207ENST00000590550 IDI1Q13907 227 aa24.62■■□□□ 1.53
MBD3-207ENST00000590550 NGEFQ8N5V2 710 aa24.62■■□□□ 1.53
MBD3-207ENST00000590550 EVC2Q86UK5 1308 aa24.62■■□□□ 1.53
MBD3-207ENST00000590550 ZC3H13Q5T200 1668 aaKnown RBP24.62■■□□□ 1.53
MBD3-207ENST00000590550 HECW2Q9P2P5 1572 aa24.61■■□□□ 1.53
MBD3-207ENST00000590550 SIGLEC1Q9BZZ2 1709 aa24.61■■□□□ 1.53
MBD3-207ENST00000590550 CFAP53Q96M91 514 aa24.61■■□□□ 1.53
MBD3-207ENST00000590550 RPGRIP1LQ68CZ1 1315 aa24.6■■□□□ 1.53
MBD3-207ENST00000590550 VGFO15240 615 aaPredicted RBP24.6■■□□□ 1.53
MBD3-207ENST00000590550 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
MBD3-207ENST00000590550 GGNBP2Q9H3C7 697 aa24.59■■□□□ 1.53
MBD3-207ENST00000590550 GLI2P10070 1586 aa24.59■■□□□ 1.53
MBD3-207ENST00000590550 TULP4Q9NRJ4 1543 aa24.59■■□□□ 1.53
MBD3-207ENST00000590550 SRPK2P78362 688 aaKnown RBP24.59■■□□□ 1.53
MBD3-207ENST00000590550 SEC24BO95487 1268 aa24.59■■□□□ 1.53
MBD3-207ENST00000590550 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.53
MBD3-207ENST00000590550 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.52
MBD3-207ENST00000590550 PCDHB15Q9Y5E8 787 aa24.58■■□□□ 1.52
MBD3-207ENST00000590550 U2SURPO15042 1029 aaKnown RBP24.57■■□□□ 1.52
MBD3-207ENST00000590550 TSR2Q969E8 191 aaKnown RBP24.57■■□□□ 1.52
MBD3-207ENST00000590550 ARXQ96QS3 562 aa24.56■■□□□ 1.52
MBD3-207ENST00000590550 ANKRD36BQ8N2N9 1353 aa24.56■■□□□ 1.52
MBD3-207ENST00000590550 MINK1Q8N4C8 1332 aaPredicted RBP24.56■■□□□ 1.52
MBD3-207ENST00000590550 NAP1L5Q96NT1 182 aaPredicted RBP24.54■■□□□ 1.52
MBD3-207ENST00000590550 CAMSAP1Q5T5Y3 1602 aa24.54■■□□□ 1.52
MBD3-207ENST00000590550 WDR63Q8IWG1 891 aa24.54■■□□□ 1.52
MBD3-207ENST00000590550 A0A1W2PP64 1363 aa24.53■■□□□ 1.52
MBD3-207ENST00000590550 NEXMIFQ5QGS0 1516 aa24.53■■□□□ 1.52
MBD3-207ENST00000590550 POGKQ9P215 609 aa24.53■■□□□ 1.52
MBD3-207ENST00000590550 ARHGEF28Q8N1W1 1705 aaKnown RBP24.51■■□□□ 1.51
MBD3-207ENST00000590550 USP19O94966 1318 aa24.5■■□□□ 1.51
MBD3-207ENST00000590550 PRAM1Q96QH2 718 aa24.49■■□□□ 1.51
MBD3-207ENST00000590550 FBXO31Q5XUX0 539 aaPredicted RBP24.49■■□□□ 1.51
MBD3-207ENST00000590550 YEATS2Q9ULM3 1422 aa24.49■■□□□ 1.51
MBD3-207ENST00000590550 NINLQ9Y2I6 1382 aa24.48■■□□□ 1.51
MBD3-207ENST00000590550 CFAP74Q9C0B2 1584 aa24.48■■□□□ 1.51
MBD3-207ENST00000590550 MYH16Q9H6N6 1097 aa24.48■■□□□ 1.51
MBD3-207ENST00000590550 HSP90AA2PQ14568 343 aaPredicted RBP24.47■■□□□ 1.51
MBD3-207ENST00000590550 CCDC27Q2M243 656 aa24.47■■□□□ 1.51
MBD3-207ENST00000590550 FBLN1P23142 703 aa24.46■■□□□ 1.51
MBD3-207ENST00000590550 USP32Q8NFA0 1604 aa24.45■■□□□ 1.51
MBD3-207ENST00000590550 PDZRN3Q9UPQ7 1066 aa24.45■■□□□ 1.5
MBD3-207ENST00000590550 DIP2CQ9Y2E4 1556 aa24.45■■□□□ 1.5
MBD3-207ENST00000590550 MAPK8IP3Q9UPT6 1336 aa24.45■■□□□ 1.5
MBD3-207ENST00000590550 EXOSC9Q06265 439 aaKnown RBP24.45■■□□□ 1.5
MBD3-207ENST00000590550 PIK3C2BO00750 1634 aa24.45■■□□□ 1.5
MBD3-207ENST00000590550 FYB1O15117 783 aa24.44■■□□□ 1.5
MBD3-207ENST00000590550 PMFBP1Q8TBY8 1022 aa24.43■■□□□ 1.5
MBD3-207ENST00000590550 FTSJ3Q8IY81 847 aaKnown RBP24.42■■□□□ 1.5
MBD3-207ENST00000590550 ABCC11Q96J66 1382 aa24.42■■□□□ 1.5
MBD3-207ENST00000590550 TMPOP42166 694 aaKnown RBP24.42■■□□□ 1.5
MBD3-207ENST00000590550 SMC4Q9NTJ3 1288 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms