RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 TBC1D2Q9BYX2 928 aa18.69■□□□□ 0.58
LRP3-203ENST00000590278 NGEFQ8N5V2 710 aa18.69■□□□□ 0.58
LRP3-203ENST00000590278 KDM5AP29375 1690 aaKnown RBP18.68■□□□□ 0.58
LRP3-203ENST00000590278 TRPM2O94759 1503 aa18.68■□□□□ 0.58
LRP3-203ENST00000590278 MYH16Q9H6N6 1097 aa18.68■□□□□ 0.58
LRP3-203ENST00000590278 STK26Q9P289 416 aa18.68■□□□□ 0.58
LRP3-203ENST00000590278 CABP2Q9NPB3 220 aa18.67■□□□□ 0.58
LRP3-203ENST00000590278 ZKSCAN2Q63HK3 967 aa18.67■□□□□ 0.58
LRP3-203ENST00000590278 POLR3AO14802 1390 aaPredicted RBP18.67■□□□□ 0.58
LRP3-203ENST00000590278 NOS1P29475 1434 aa18.66■□□□□ 0.58
LRP3-203ENST00000590278 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
LRP3-203ENST00000590278 DZIP1LQ8IYY4 767 aaKnown RBP18.66■□□□□ 0.58
LRP3-203ENST00000590278 ABCC1P33527 1531 aa18.65■□□□□ 0.58
LRP3-203ENST00000590278 TBC1D32Q96NH3 1257 aa18.65■□□□□ 0.58
LRP3-203ENST00000590278 EXOSC9Q06265 439 aaKnown RBP18.65■□□□□ 0.58
LRP3-203ENST00000590278 PTPRTO14522 1441 aa18.65■□□□□ 0.58
LRP3-203ENST00000590278 MVPQ14764 893 aaKnown RBP18.64■□□□□ 0.58
LRP3-203ENST00000590278 NINLQ9Y2I6 1382 aa18.64■□□□□ 0.57
LRP3-203ENST00000590278 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.57
LRP3-203ENST00000590278 MYOM1P52179 1685 aa18.64■□□□□ 0.57
LRP3-203ENST00000590278 WDR63Q8IWG1 891 aa18.64■□□□□ 0.57
LRP3-203ENST00000590278 SRPK2P78362 688 aaKnown RBP18.63■□□□□ 0.57
LRP3-203ENST00000590278 CHD1O14646 1710 aa18.63■□□□□ 0.57
LRP3-203ENST00000590278 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
LRP3-203ENST00000590278 C22orf23Q9BZE7 217 aa18.62■□□□□ 0.57
LRP3-203ENST00000590278 CFAP65Q6ZU64 1925 aaKnown RBP18.61■□□□□ 0.57
LRP3-203ENST00000590278 FANCAO15360 1455 aa18.59■□□□□ 0.57
LRP3-203ENST00000590278 L1TD1Q5T7N2 865 aaKnown RBP18.59■□□□□ 0.57
LRP3-203ENST00000590278 ZFYVE16Q7Z3T8 1539 aa18.58■□□□□ 0.57
LRP3-203ENST00000590278 TRIM27P14373 513 aa18.58■□□□□ 0.57
LRP3-203ENST00000590278 SSH1Q8WYL5 1049 aa18.58■□□□□ 0.57
LRP3-203ENST00000590278 FOXD4L1Q9NU39 408 aa18.58■□□□□ 0.57
LRP3-203ENST00000590278 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.56
LRP3-203ENST00000590278 CEP152O94986 1710 aa18.57■□□□□ 0.56
LRP3-203ENST00000590278 GOLGA6L3A6NEY3 463 aa18.57■□□□□ 0.56
LRP3-203ENST00000590278 FAM43AQ8N2R8 423 aa18.57■□□□□ 0.56
LRP3-203ENST00000590278 LNPKQ9C0E8 428 aa18.57■□□□□ 0.56
LRP3-203ENST00000590278 ANTXR1Q9H6X2 564 aa18.57■□□□□ 0.56
LRP3-203ENST00000590278 HSCBQ8IWL3 235 aa18.57■□□□□ 0.56
LRP3-203ENST00000590278 RTEL1-TNFRSF6BF6WH68 1400 aa18.57■□□□□ 0.56
LRP3-203ENST00000590278 ZCCHC11Q5TAX3 1644 aaKnown RBP18.57■□□□□ 0.56
LRP3-203ENST00000590278 ADGRL1O94910 1474 aa18.56■□□□□ 0.56
LRP3-203ENST00000590278 EVC2Q86UK5 1308 aa18.56■□□□□ 0.56
LRP3-203ENST00000590278 HSP90AA1P07900 732 aaKnown RBP18.56■□□□□ 0.56
LRP3-203ENST00000590278 ABCA6Q8N139 1617 aa18.56■□□□□ 0.56
LRP3-203ENST00000590278 MCM4P33991 863 aa18.55■□□□□ 0.56
LRP3-203ENST00000590278 RIPK4P57078 832 aa18.55■□□□□ 0.56
LRP3-203ENST00000590278 PANK2Q9BZ23 570 aa18.55■□□□□ 0.56
LRP3-203ENST00000590278 ATP7AQ04656 1500 aa18.55■□□□□ 0.56
LRP3-203ENST00000590278 TMEM57Q8N5G2 664 aa18.55■□□□□ 0.56
LRP3-203ENST00000590278 C14orf93Q9H972 538 aaKnown RBP18.55■□□□□ 0.56
LRP3-203ENST00000590278 MINK1Q8N4C8 1332 aaPredicted RBP18.54■□□□□ 0.56
LRP3-203ENST00000590278 MAP3K4Q9Y6R4 1608 aa18.54■□□□□ 0.56
LRP3-203ENST00000590278 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
LRP3-203ENST00000590278 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
LRP3-203ENST00000590278 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
LRP3-203ENST00000590278 AAMPQ13685 434 aa18.53■□□□□ 0.56
LRP3-203ENST00000590278 ATF7IPQ6VMQ6 1270 aa18.53■□□□□ 0.56
LRP3-203ENST00000590278 RRAGDQ9NQL2 400 aaPredicted RBP18.52■□□□□ 0.56
LRP3-203ENST00000590278 CHMP5Q9NZZ3 219 aa18.52■□□□□ 0.56
LRP3-203ENST00000590278 TET3O43151 1660 aa18.52■□□□□ 0.56
LRP3-203ENST00000590278 TRAK2O60296 914 aa18.52■□□□□ 0.55
LRP3-203ENST00000590278 C1orf115Q9H7X2 142 aa18.52■□□□□ 0.55
LRP3-203ENST00000590278 NLRP1Q9C000 1473 aa18.52■□□□□ 0.55
LRP3-203ENST00000590278 FBLN1P23142 703 aa18.51■□□□□ 0.55
LRP3-203ENST00000590278 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
LRP3-203ENST00000590278 HSP90AB1P08238 724 aaKnown RBP18.5■□□□□ 0.55
LRP3-203ENST00000590278 XRCC6P12956 609 aaKnown RBP eCLIP18.5■□□□□ 0.55
LRP3-203ENST00000590278 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
LRP3-203ENST00000590278 NAP1L5Q96NT1 182 aaPredicted RBP18.49■□□□□ 0.55
LRP3-203ENST00000590278 SHROOM2Q13796 1616 aa18.49■□□□□ 0.55
LRP3-203ENST00000590278 MYOM2P54296 1465 aa18.49■□□□□ 0.55
LRP3-203ENST00000590278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
LRP3-203ENST00000590278 ZNF518AQ6AHZ1 1483 aa18.48■□□□□ 0.55
LRP3-203ENST00000590278 ANKRD45Q5TZF3 282 aa18.48■□□□□ 0.55
LRP3-203ENST00000590278 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
LRP3-203ENST00000590278 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
LRP3-203ENST00000590278 TRIM35Q9UPQ4 493 aa18.47■□□□□ 0.55
LRP3-203ENST00000590278 SBNO2Q9Y2G9 1366 aa18.47■□□□□ 0.55
LRP3-203ENST00000590278 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
LRP3-203ENST00000590278 KIF1BO60333 1816 aa18.45■□□□□ 0.54
LRP3-203ENST00000590278 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
LRP3-203ENST00000590278 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
LRP3-203ENST00000590278 HMOX1P09601 288 aa18.45■□□□□ 0.54
LRP3-203ENST00000590278 DIAPH1O60610 1272 aaKnown RBP18.45■□□□□ 0.54
LRP3-203ENST00000590278 IQSEC2Q5JU85 1478 aa18.44■□□□□ 0.54
LRP3-203ENST00000590278 ANKRD36BQ8N2N9 1353 aa18.44■□□□□ 0.54
LRP3-203ENST00000590278 HDAC1Q13547 482 aaPredicted RBP18.43■□□□□ 0.54
LRP3-203ENST00000590278 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
LRP3-203ENST00000590278 PRAM1Q96QH2 718 aa18.42■□□□□ 0.54
LRP3-203ENST00000590278 PNNQ9H307 717 aaKnown RBP18.42■□□□□ 0.54
LRP3-203ENST00000590278 MROH2AA6NES4 1674 aa18.42■□□□□ 0.54
LRP3-203ENST00000590278 SHPRHQ149N8 1683 aa18.41■□□□□ 0.54
LRP3-203ENST00000590278 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
LRP3-203ENST00000590278 TERF2IPQ9NYB0 399 aa18.41■□□□□ 0.54
LRP3-203ENST00000590278 NPATQ14207 1427 aa18.41■□□□□ 0.54
LRP3-203ENST00000590278 VIRMAQ69YN4 1812 aaKnown RBP18.41■□□□□ 0.54
LRP3-203ENST00000590278 CHD1LQ86WJ1 897 aa18.41■□□□□ 0.54
LRP3-203ENST00000590278 KIAA1210Q9ULL0 1709 aa18.41■□□□□ 0.54
LRP3-203ENST00000590278 FYB1O15117 783 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms