RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 METP08581 1390 aa12.27□□□□□ -0.45
TPM4-211ENST00000589897 ATRNO75882 1429 aa12.27□□□□□ -0.45
TPM4-211ENST00000589897 MST1RQ04912 1400 aa12.27□□□□□ -0.45
TPM4-211ENST00000589897 DEFB132Q7Z7B7 95 aa12.26□□□□□ -0.45
TPM4-211ENST00000589897 PPLO60437 1756 aa12.24□□□□□ -0.45
TPM4-211ENST00000589897 HRCP23327 699 aa12.24□□□□□ -0.45
TPM4-211ENST00000589897 XRN1Q8IZH2 1706 aaKnown RBP12.24□□□□□ -0.45
TPM4-211ENST00000589897 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
TPM4-211ENST00000589897 YY1P25490 414 aa12.23□□□□□ -0.45
TPM4-211ENST00000589897 BAG6P46379 1132 aa12.22□□□□□ -0.45
TPM4-211ENST00000589897 UNC5CLQ8IV45 518 aa12.22□□□□□ -0.45
TPM4-211ENST00000589897 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.45
TPM4-211ENST00000589897 ORAI2Q96SN7 254 aa12.21□□□□□ -0.45
TPM4-211ENST00000589897 BCL9LQ86UU0 1499 aa12.2□□□□□ -0.46
TPM4-211ENST00000589897 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
TPM4-211ENST00000589897 ADGRF5Q8IZF2 1346 aa12.19□□□□□ -0.46
TPM4-211ENST00000589897 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
TPM4-211ENST00000589897 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
TPM4-211ENST00000589897 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
TPM4-211ENST00000589897 STK26Q9P289 416 aa12.19□□□□□ -0.46
TPM4-211ENST00000589897 C1orf167Q5SNV9 1468 aa12.19□□□□□ -0.46
TPM4-211ENST00000589897 SPATA31E1Q6ZUB1 1445 aa12.19□□□□□ -0.46
TPM4-211ENST00000589897 NPHP3Q7Z494 1330 aa12.18□□□□□ -0.46
TPM4-211ENST00000589897 KRT27Q7Z3Y8 459 aa12.18□□□□□ -0.46
TPM4-211ENST00000589897 ROBO2Q9HCK4 1378 aa12.18□□□□□ -0.46
TPM4-211ENST00000589897 ONECUT3O60422 494 aaPredicted RBP12.17□□□□□ -0.46
TPM4-211ENST00000589897 NALCNQ8IZF0 1738 aa12.17□□□□□ -0.46
TPM4-211ENST00000589897 ESCO1Q5FWF5 840 aa12.16□□□□□ -0.46
TPM4-211ENST00000589897 IFT172Q9UG01 1749 aa12.16□□□□□ -0.46
TPM4-211ENST00000589897 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.46
TPM4-211ENST00000589897 TMEM132EQ6IEE7 984 aa12.15□□□□□ -0.46
TPM4-211ENST00000589897 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
TPM4-211ENST00000589897 VPS72Q15906 364 aa12.14□□□□□ -0.47
TPM4-211ENST00000589897 LRP5O75197 1615 aa12.14□□□□□ -0.47
TPM4-211ENST00000589897 FOXO3O43524 673 aa12.13□□□□□ -0.47
TPM4-211ENST00000589897 R3HDM1Q15032 1099 aaKnown RBP12.13□□□□□ -0.47
TPM4-211ENST00000589897 CCDC9Q9Y3X0 531 aaKnown RBP12.13□□□□□ -0.47
TPM4-211ENST00000589897 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
TPM4-211ENST00000589897 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
TPM4-211ENST00000589897 WAPLQ7Z5K2 1190 aa12.12□□□□□ -0.47
TPM4-211ENST00000589897 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
TPM4-211ENST00000589897 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
TPM4-211ENST00000589897 RALGAPBQ86X10 1494 aa12.12□□□□□ -0.47
TPM4-211ENST00000589897 PRAG1Q86YV5 1406 aa12.11□□□□□ -0.47
TPM4-211ENST00000589897 MYOM2P54296 1465 aa12.11□□□□□ -0.47
TPM4-211ENST00000589897 ABCC11Q96J66 1382 aa12.11□□□□□ -0.47
TPM4-211ENST00000589897 CFAP70Q5T0N1 1121 aa12.11□□□□□ -0.47
TPM4-211ENST00000589897 DCAF11Q8TEB1 546 aa12.11□□□□□ -0.47
TPM4-211ENST00000589897 C14orf93Q9H972 538 aaKnown RBP12.11□□□□□ -0.47
TPM4-211ENST00000589897 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
TPM4-211ENST00000589897 A0A0G2JS52 829 aa12.1□□□□□ -0.47
TPM4-211ENST00000589897 NUTM2FA1L443 756 aa12.1□□□□□ -0.47
TPM4-211ENST00000589897 MYT1Q01538 1121 aa12.1□□□□□ -0.47
TPM4-211ENST00000589897 EN1Q05925 392 aaPredicted RBP12.1□□□□□ -0.47
TPM4-211ENST00000589897 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
TPM4-211ENST00000589897 LAMC1P11047 1609 aa12.1□□□□□ -0.47
TPM4-211ENST00000589897 EP400Q96L91 3159 aa12.09□□□□□ -0.47
TPM4-211ENST00000589897 POGKQ9P215 609 aa12.09□□□□□ -0.47
TPM4-211ENST00000589897 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.47
TPM4-211ENST00000589897 XPCQ01831 940 aaPredicted RBP12.08□□□□□ -0.48
TPM4-211ENST00000589897 STAC3Q96MF2 364 aa12.08□□□□□ -0.48
TPM4-211ENST00000589897 TECPR2O15040 1411 aa12.08□□□□□ -0.48
TPM4-211ENST00000589897 CDC42BPGQ6DT37 1551 aa12.08□□□□□ -0.48
TPM4-211ENST00000589897 SAFB2Q14151 953 aaKnown RBP eCLIP12.07□□□□□ -0.48
TPM4-211ENST00000589897 SIRT1Q96EB6 747 aa12.07□□□□□ -0.48
TPM4-211ENST00000589897 SLIT2O94813 1529 aa12.06□□□□□ -0.48
TPM4-211ENST00000589897 PLEKHH1Q9ULM0 1364 aa12.06□□□□□ -0.48
TPM4-211ENST00000589897 PSME1Q06323 249 aa12.06□□□□□ -0.48
TPM4-211ENST00000589897 PRAM1Q96QH2 718 aa12.06□□□□□ -0.48
TPM4-211ENST00000589897 NRXN1Q9ULB1 1477 aa12.06□□□□□ -0.48
TPM4-211ENST00000589897 SPATA31A3Q5VYP0 1347 aa12.06□□□□□ -0.48
TPM4-211ENST00000589897 PPP1R1BQ9UD71 204 aaPredicted RBP12.05□□□□□ -0.48
TPM4-211ENST00000589897 TRAK1Q9UPV9 953 aa12.05□□□□□ -0.48
TPM4-211ENST00000589897 NBPF8Q3BBV2 869 aa12.04□□□□□ -0.48
TPM4-211ENST00000589897 NBPF14Q5TI25 921 aa12.04□□□□□ -0.48
TPM4-211ENST00000589897 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
TPM4-211ENST00000589897 COL22A1Q8NFW1 1626 aaPredicted RBP12.03□□□□□ -0.48
TPM4-211ENST00000589897 EZH2Q15910 746 aaKnown RBP12.02□□□□□ -0.49
TPM4-211ENST00000589897 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
TPM4-211ENST00000589897 SPON1Q9HCB6 807 aa12.02□□□□□ -0.49
TPM4-211ENST00000589897 FMN2Q9NZ56 1722 aa12.02□□□□□ -0.49
TPM4-211ENST00000589897 FAM83GA6ND36 823 aa12.01□□□□□ -0.49
TPM4-211ENST00000589897 FAM196AQ6ZSG2 479 aa12.01□□□□□ -0.49
TPM4-211ENST00000589897 CAMKK2Q96RR4 588 aa12.01□□□□□ -0.49
TPM4-211ENST00000589897 KIF1AQ12756 1690 aa12□□□□□ -0.49
TPM4-211ENST00000589897 SENP3-EIF4A1A0A087X0R7 540 aa12□□□□□ -0.49
TPM4-211ENST00000589897 HIRIP3Q9BW71 556 aaPredicted RBP12□□□□□ -0.49
TPM4-211ENST00000589897 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
TPM4-211ENST00000589897 MINK1Q8N4C8 1332 aaPredicted RBP12□□□□□ -0.49
TPM4-211ENST00000589897 PXDNQ92626 1479 aa12□□□□□ -0.49
TPM4-211ENST00000589897 DLC1Q96QB1 1528 aa12□□□□□ -0.49
TPM4-211ENST00000589897 GLI3P10071 1580 aa12□□□□□ -0.49
TPM4-211ENST00000589897 APBA3O96018 575 aa11.99□□□□□ -0.49
TPM4-211ENST00000589897 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
TPM4-211ENST00000589897 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
TPM4-211ENST00000589897 RGPD8O14715 1765 aaPredicted RBP11.99□□□□□ -0.49
TPM4-211ENST00000589897 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
TPM4-211ENST00000589897 PARD3Q8TEW0 1356 aa11.98□□□□□ -0.49
TPM4-211ENST00000589897 KCNQ2O43526 872 aa11.98□□□□□ -0.49
TPM4-211ENST00000589897 ZNF784Q8NCA9 323 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms