RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 ZFYVE9O95405 1425 aa9.38□□□□□ -0.91
SPIDR-228ENST00000588781 LTBP4Q8N2S1 1624 aa9.38□□□□□ -0.91
SPIDR-228ENST00000588781 UGGT1Q9NYU2 1555 aa9.37□□□□□ -0.91
SPIDR-228ENST00000588781 CGNL1Q0VF96 1302 aa9.37□□□□□ -0.91
SPIDR-228ENST00000588781 EVC2Q86UK5 1308 aa9.37□□□□□ -0.91
SPIDR-228ENST00000588781 E9PSI1 815 aa9.37□□□□□ -0.91
SPIDR-228ENST00000588781 EXOC6Q8TAG9 804 aa9.37□□□□□ -0.91
SPIDR-228ENST00000588781 QRICH2Q9H0J4 1663 aa9.36□□□□□ -0.91
SPIDR-228ENST00000588781 PIK3C2BO00750 1634 aa9.36□□□□□ -0.91
SPIDR-228ENST00000588781 PPP6R1Q9UPN7 881 aa9.36□□□□□ -0.91
SPIDR-228ENST00000588781 DIP2CQ9Y2E4 1556 aa9.36□□□□□ -0.91
SPIDR-228ENST00000588781 ZNF521Q96K83 1311 aa9.35□□□□□ -0.91
SPIDR-228ENST00000588781 ADGRB1O14514 1584 aa9.35□□□□□ -0.91
SPIDR-228ENST00000588781 AAMPQ13685 434 aa9.35□□□□□ -0.91
SPIDR-228ENST00000588781 PLPPR3Q6T4P5 718 aa9.35□□□□□ -0.91
SPIDR-228ENST00000588781 MORC1Q86VD1 984 aa9.35□□□□□ -0.91
SPIDR-228ENST00000588781 NOP58Q9Y2X3 529 aaKnown RBP9.35□□□□□ -0.91
SPIDR-228ENST00000588781 SETD1BQ9UPS6 1966 aaKnown RBP9.35□□□□□ -0.91
SPIDR-228ENST00000588781 NKTRP30414 1462 aaKnown RBP9.34□□□□□ -0.91
SPIDR-228ENST00000588781 NSD3Q9BZ95 1437 aa9.34□□□□□ -0.91
SPIDR-228ENST00000588781 SLFN5Q08AF3 891 aa9.34□□□□□ -0.91
SPIDR-228ENST00000588781 DUSP27Q5VZP5 1158 aa9.34□□□□□ -0.91
SPIDR-228ENST00000588781 CENPQQ7L2Z9 268 aaPredicted RBP9.34□□□□□ -0.91
SPIDR-228ENST00000588781 CDCA7LQ96GN5 454 aa9.34□□□□□ -0.91
SPIDR-228ENST00000588781 IPO9Q96P70 1041 aaKnown RBP9.33□□□□□ -0.92
SPIDR-228ENST00000588781 ANKRD36BQ8N2N9 1353 aa9.33□□□□□ -0.92
SPIDR-228ENST00000588781 NEXMIFQ5QGS0 1516 aa9.32□□□□□ -0.92
SPIDR-228ENST00000588781 TRMT2AQ8IZ69 625 aaKnown RBP9.32□□□□□ -0.92
SPIDR-228ENST00000588781 RUNDC1Q96C34 613 aa9.32□□□□□ -0.92
SPIDR-228ENST00000588781 DDRGK1Q96HY6 314 aa9.32□□□□□ -0.92
SPIDR-228ENST00000588781 CRBNQ96SW2 442 aa9.32□□□□□ -0.92
SPIDR-228ENST00000588781 ZBTB47Q9UFB7 747 aaPredicted RBP9.32□□□□□ -0.92
SPIDR-228ENST00000588781 TRAK1Q9UPV9 953 aa9.32□□□□□ -0.92
SPIDR-228ENST00000588781 ATAD2Q6PL18 1390 aa9.32□□□□□ -0.92
SPIDR-228ENST00000588781 PLEKHH1Q9ULM0 1364 aa9.32□□□□□ -0.92
SPIDR-228ENST00000588781 MSH5O43196 834 aa9.31□□□□□ -0.92
SPIDR-228ENST00000588781 PNNQ9H307 717 aaKnown RBP9.31□□□□□ -0.92
SPIDR-228ENST00000588781 REREQ9P2R6 1566 aa9.31□□□□□ -0.92
SPIDR-228ENST00000588781 PDE3AQ14432 1141 aa9.3□□□□□ -0.92
SPIDR-228ENST00000588781 CCDC27Q2M243 656 aa9.3□□□□□ -0.92
SPIDR-228ENST00000588781 WDR63Q8IWG1 891 aa9.3□□□□□ -0.92
SPIDR-228ENST00000588781 CARD14Q9BXL6 1004 aa9.3□□□□□ -0.92
SPIDR-228ENST00000588781 ARHGEF28Q8N1W1 1705 aaKnown RBP9.29□□□□□ -0.92
SPIDR-228ENST00000588781 APAF1O14727 1248 aa9.29□□□□□ -0.92
SPIDR-228ENST00000588781 TERF2IPQ9NYB0 399 aa9.29□□□□□ -0.92
SPIDR-228ENST00000588781 AGLP35573 1532 aa9.29□□□□□ -0.92
SPIDR-228ENST00000588781 SENP3-EIF4A1A0A087X0R7 540 aa9.28□□□□□ -0.92
SPIDR-228ENST00000588781 CT47B1P0C2W7 299 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-228ENST00000588781 PDE4AP27815 886 aa9.28□□□□□ -0.92
SPIDR-228ENST00000588781 CEBPAP49715 358 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-228ENST00000588781 MLECQ14165 292 aa9.28□□□□□ -0.92
SPIDR-228ENST00000588781 BACH2Q9BYV9 841 aa9.28□□□□□ -0.92
SPIDR-228ENST00000588781 MYH16Q9H6N6 1097 aa9.28□□□□□ -0.92
SPIDR-228ENST00000588781 MED14O60244 1454 aa9.28□□□□□ -0.92
SPIDR-228ENST00000588781 CANXP27824 592 aaKnown RBP9.27□□□□□ -0.93
SPIDR-228ENST00000588781 HDGFL2Q7Z4V5 671 aaPredicted RBP9.27□□□□□ -0.93
SPIDR-228ENST00000588781 CCDC146Q8IYE0 955 aa9.27□□□□□ -0.93
SPIDR-228ENST00000588781 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
SPIDR-228ENST00000588781 PLIN1O60240 522 aa9.26□□□□□ -0.93
SPIDR-228ENST00000588781 IDI1Q13907 227 aa9.26□□□□□ -0.93
SPIDR-228ENST00000588781 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
SPIDR-228ENST00000588781 SLC12A5Q9H2X9 1139 aa9.26□□□□□ -0.93
SPIDR-228ENST00000588781 POGKQ9P215 609 aa9.26□□□□□ -0.93
SPIDR-228ENST00000588781 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
SPIDR-228ENST00000588781 TMEM131LA2VDJ0 1609 aa9.26□□□□□ -0.93
SPIDR-228ENST00000588781 CLTCQ00610 1675 aaKnown RBP9.26□□□□□ -0.93
SPIDR-228ENST00000588781 TULP4Q9NRJ4 1543 aa9.26□□□□□ -0.93
SPIDR-228ENST00000588781 ABCC11Q96J66 1382 aa9.25□□□□□ -0.93
SPIDR-228ENST00000588781 HDGFP51858 240 aaKnown RBP9.25□□□□□ -0.93
SPIDR-228ENST00000588781 TMEM132EQ6IEE7 984 aa9.25□□□□□ -0.93
SPIDR-228ENST00000588781 WWC1Q8IX03 1113 aa9.25□□□□□ -0.93
SPIDR-228ENST00000588781 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.25□□□□□ -0.93
SPIDR-228ENST00000588781 KDM2BQ8NHM5 1336 aa9.25□□□□□ -0.93
SPIDR-228ENST00000588781 DLC1Q96QB1 1528 aa9.25□□□□□ -0.93
SPIDR-228ENST00000588781 CFAP65Q6ZU64 1925 aaKnown RBP9.25□□□□□ -0.93
SPIDR-228ENST00000588781 YTHDC2Q9H6S0 1430 aaKnown RBP9.24□□□□□ -0.93
SPIDR-228ENST00000588781 C3P01024 1663 aa9.24□□□□□ -0.93
SPIDR-228ENST00000588781 SHPRHQ149N8 1683 aa9.24□□□□□ -0.93
SPIDR-228ENST00000588781 PPM1GO15355 546 aaPredicted RBP9.24□□□□□ -0.93
SPIDR-228ENST00000588781 NEFMP07197 916 aa9.24□□□□□ -0.93
SPIDR-228ENST00000588781 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
SPIDR-228ENST00000588781 PMFBP1Q8TBY8 1022 aa9.24□□□□□ -0.93
SPIDR-228ENST00000588781 DAXXQ9UER7 740 aaPredicted RBP9.24□□□□□ -0.93
SPIDR-228ENST00000588781 MAPK8IP3Q9UPT6 1336 aa9.24□□□□□ -0.93
SPIDR-228ENST00000588781 UBAP1LF5GYI3 381 aa9.23□□□□□ -0.93
SPIDR-228ENST00000588781 MTHFSP49914 203 aa9.23□□□□□ -0.93
SPIDR-228ENST00000588781 FAM161AQ3B820 660 aa9.23□□□□□ -0.93
SPIDR-228ENST00000588781 ZMYM3Q14202 1370 aa9.23□□□□□ -0.93
SPIDR-228ENST00000588781 ANKRD26Q9UPS8 1709 aa9.22□□□□□ -0.93
SPIDR-228ENST00000588781 TCP11L2Q8N4U5 519 aa9.22□□□□□ -0.93
SPIDR-228ENST00000588781 PHF23Q9BUL5 403 aaPredicted RBP9.22□□□□□ -0.93
SPIDR-228ENST00000588781 USP35Q9P2H5 1018 aa9.22□□□□□ -0.93
SPIDR-228ENST00000588781 IL16Q14005 1332 aa9.22□□□□□ -0.93
SPIDR-228ENST00000588781 U2AF1L5P0DN76 240 aaPredicted RBP9.21□□□□□ -0.94
SPIDR-228ENST00000588781 U2AF1Q01081 240 aaKnown RBP eCLIP9.21□□□□□ -0.94
SPIDR-228ENST00000588781 ESF1Q9H501 851 aaKnown RBP9.21□□□□□ -0.94
SPIDR-228ENST00000588781 ADGRB2O60241 1585 aa9.2□□□□□ -0.94
SPIDR-228ENST00000588781 ALKQ9UM73 1620 aa9.2□□□□□ -0.94
SPIDR-228ENST00000588781 CALD1Q05682 793 aaKnown RBP9.2□□□□□ -0.94
SPIDR-228ENST00000588781 C20orf194Q5TEA3 1177 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms