RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 GJD4Q96KN9 370 aaPredicted RBP8.27□□□□□ -1.09
TUBD1-207ENST00000587476 ZBED2Q9BTP6 218 aa8.27□□□□□ -1.09
TUBD1-207ENST00000587476 ACIN1Q9UKV3 1341 aaKnown RBP8.27□□□□□ -1.09
TUBD1-207ENST00000587476 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
TUBD1-207ENST00000587476 SWT1Q5T5J6 900 aaKnown RBP8.26□□□□□ -1.09
TUBD1-207ENST00000587476 SLC10A3P09131 477 aa8.25□□□□□ -1.09
TUBD1-207ENST00000587476 ZNF687Q8N1G0 1237 aa8.25□□□□□ -1.09
TUBD1-207ENST00000587476 RABGEF1Q9UJ41 708 aa8.25□□□□□ -1.09
TUBD1-207ENST00000587476 PCDHGC3Q9UN70 934 aa8.25□□□□□ -1.09
TUBD1-207ENST00000587476 NPM2Q86SE8 214 aaKnown RBP8.24□□□□□ -1.09
TUBD1-207ENST00000587476 GUCA2AQ02747 115 aa8.23□□□□□ -1.09
TUBD1-207ENST00000587476 CTDSPL2Q05D32 466 aa8.23□□□□□ -1.09
TUBD1-207ENST00000587476 IRF5Q13568 498 aa8.23□□□□□ -1.09
TUBD1-207ENST00000587476 AEBP1Q8IUX7 1158 aa8.23□□□□□ -1.09
TUBD1-207ENST00000587476 TSC1Q92574 1164 aa8.23□□□□□ -1.09
TUBD1-207ENST00000587476 HDGFL1Q5TGJ6 251 aa8.22□□□□□ -1.09
TUBD1-207ENST00000587476 SLF2Q8IX21 1173 aa8.22□□□□□ -1.09
TUBD1-207ENST00000587476 SLC4A5Q9BY07 1137 aa8.22□□□□□ -1.09
TUBD1-207ENST00000587476 HMX1Q9NP08 348 aaPredicted RBP8.22□□□□□ -1.09
TUBD1-207ENST00000587476 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
TUBD1-207ENST00000587476 FAM98CQ17RN3 349 aaKnown RBP8.21□□□□□ -1.1
TUBD1-207ENST00000587476 SPNS2Q8IVW8 549 aa8.21□□□□□ -1.1
TUBD1-207ENST00000587476 HLA-CQ95604 372 aa8.21□□□□□ -1.1
TUBD1-207ENST00000587476 PBXIP1Q96AQ6 731 aa8.21□□□□□ -1.1
TUBD1-207ENST00000587476 TRIM34Q9BYJ4 488 aa8.21□□□□□ -1.1
TUBD1-207ENST00000587476 SEPT9Q9UHD8 586 aaPredicted RBP8.21□□□□□ -1.1
TUBD1-207ENST00000587476 ARHGAP33O14559 1287 aa8.2□□□□□ -1.1
TUBD1-207ENST00000587476 CFAP99D6REC4 459 aa8.19□□□□□ -1.1
TUBD1-207ENST00000587476 CFHP08603 1231 aa8.19□□□□□ -1.1
TUBD1-207ENST00000587476 PSEN2P49810 448 aa8.19□□□□□ -1.1
TUBD1-207ENST00000587476 FUT2Q10981 343 aa8.19□□□□□ -1.1
TUBD1-207ENST00000587476 LRRN4Q8WUT4 740 aa8.19□□□□□ -1.1
TUBD1-207ENST00000587476 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
TUBD1-207ENST00000587476 GPR37L1O60883 481 aa8.18□□□□□ -1.1
TUBD1-207ENST00000587476 SOX11P35716 441 aa8.18□□□□□ -1.1
TUBD1-207ENST00000587476 ATP6V1AP38606 617 aa8.18□□□□□ -1.1
TUBD1-207ENST00000587476 VAC14Q08AM6 782 aa8.18□□□□□ -1.1
TUBD1-207ENST00000587476 ADAMTS19Q8TE59 1207 aa8.18□□□□□ -1.1
TUBD1-207ENST00000587476 KMT5BQ4FZB7 885 aa8.17□□□□□ -1.1
TUBD1-207ENST00000587476 LAPTM4BQ86VI4 370 aa8.17□□□□□ -1.1
TUBD1-207ENST00000587476 AXIN2Q9Y2T1 843 aa8.17□□□□□ -1.1
TUBD1-207ENST00000587476 PBX2P40425 430 aa8.16□□□□□ -1.1
TUBD1-207ENST00000587476 CFAP70Q5T0N1 1121 aa8.16□□□□□ -1.1
TUBD1-207ENST00000587476 POTEEQ6S8J3 1075 aa8.16□□□□□ -1.1
TUBD1-207ENST00000587476 SAMD7Q7Z3H4 446 aa8.16□□□□□ -1.1
TUBD1-207ENST00000587476 PNMA1Q8ND90 353 aa8.16□□□□□ -1.1
TUBD1-207ENST00000587476 PPP1R12CQ9BZL4 782 aa8.16□□□□□ -1.1
TUBD1-207ENST00000587476 USTQ9Y2C2 406 aa8.16□□□□□ -1.1
TUBD1-207ENST00000587476 RNF40O75150 1001 aa8.15□□□□□ -1.1
TUBD1-207ENST00000587476 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
TUBD1-207ENST00000587476 RFX1P22670 979 aa8.15□□□□□ -1.1
TUBD1-207ENST00000587476 MMRN1Q13201 1228 aa8.15□□□□□ -1.1
TUBD1-207ENST00000587476 PRR7Q8TB68 274 aa8.15□□□□□ -1.1
TUBD1-207ENST00000587476 NBPF3Q9H094 633 aa8.15□□□□□ -1.1
TUBD1-207ENST00000587476 ALG2Q9H553 416 aa8.15□□□□□ -1.1
TUBD1-207ENST00000587476 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.14□□□□□ -1.11
TUBD1-207ENST00000587476 LSM11P83369 360 aaKnown RBP eCLIP8.14□□□□□ -1.11
TUBD1-207ENST00000587476 ANKRD13DQ6ZTN6 518 aa8.14□□□□□ -1.11
TUBD1-207ENST00000587476 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
TUBD1-207ENST00000587476 Q3C1V9 767 aa8.13□□□□□ -1.11
TUBD1-207ENST00000587476 TMCO4Q5TGY1 634 aa8.13□□□□□ -1.11
TUBD1-207ENST00000587476 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
TUBD1-207ENST00000587476 EPS8L1Q8TE68 723 aa8.13□□□□□ -1.11
TUBD1-207ENST00000587476 VPS9D1Q9Y2B5 631 aa8.13□□□□□ -1.11
TUBD1-207ENST00000587476 PALM3A6NDB9 673 aaPredicted RBP8.12□□□□□ -1.11
TUBD1-207ENST00000587476 SEMA3FQ13275 785 aa8.12□□□□□ -1.11
TUBD1-207ENST00000587476 NR6A1Q15406 480 aa8.12□□□□□ -1.11
TUBD1-207ENST00000587476 DESI1Q6ICB0 168 aa8.12□□□□□ -1.11
TUBD1-207ENST00000587476 KCNA1Q09470 495 aa8.11□□□□□ -1.11
TUBD1-207ENST00000587476 SYMPKQ92797 1274 aaKnown RBP8.11□□□□□ -1.11
TUBD1-207ENST00000587476 PRR14Q9BWN1 585 aa8.11□□□□□ -1.11
TUBD1-207ENST00000587476 ACTN4O43707 911 aaKnown RBP8.1□□□□□ -1.11
TUBD1-207ENST00000587476 BRD1O95696 1058 aa8.1□□□□□ -1.11
TUBD1-207ENST00000587476 LMOD1P29536 600 aaPredicted RBP8.1□□□□□ -1.11
TUBD1-207ENST00000587476 EIF4G2P78344 907 aaKnown RBP eCLIP8.1□□□□□ -1.11
TUBD1-207ENST00000587476 SRPK2P78362 688 aaKnown RBP8.1□□□□□ -1.11
TUBD1-207ENST00000587476 MORN1Q5T089 497 aa8.1□□□□□ -1.11
TUBD1-207ENST00000587476 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
TUBD1-207ENST00000587476 PER1O15534 1290 aaPredicted RBP8.09□□□□□ -1.11
TUBD1-207ENST00000587476 ZFRQ96KR1 1074 aaKnown RBP8.09□□□□□ -1.11
TUBD1-207ENST00000587476 LRCH3Q96II8 777 aa8.08□□□□□ -1.12
TUBD1-207ENST00000587476 UCN2Q96RP3 112 aa8.08□□□□□ -1.12
TUBD1-207ENST00000587476 TFIP11Q9UBB9 837 aaKnown RBP8.08□□□□□ -1.12
TUBD1-207ENST00000587476 TK2O00142 265 aa8.07□□□□□ -1.12
TUBD1-207ENST00000587476 SLC27A5Q9Y2P5 690 aa8.07□□□□□ -1.12
TUBD1-207ENST00000587476 BHMG1C9JSJ3 638 aaPredicted RBP8.06□□□□□ -1.12
TUBD1-207ENST00000587476 ATG7O95352 703 aa8.06□□□□□ -1.12
TUBD1-207ENST00000587476 NR1H3Q13133 447 aa8.06□□□□□ -1.12
TUBD1-207ENST00000587476 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
TUBD1-207ENST00000587476 LYPD8Q6UX82 237 aa8.06□□□□□ -1.12
TUBD1-207ENST00000587476 MRPL50Q8N5N7 158 aaKnown RBP8.06□□□□□ -1.12
TUBD1-207ENST00000587476 MYT1LQ9UL68 1186 aa8.06□□□□□ -1.12
TUBD1-207ENST00000587476 MAFBQ9Y5Q3 323 aaPredicted RBP8.06□□□□□ -1.12
TUBD1-207ENST00000587476 MFAP1P55081 439 aaKnown RBP8.05□□□□□ -1.12
TUBD1-207ENST00000587476 ADGRD1Q6QNK2 874 aa8.05□□□□□ -1.12
TUBD1-207ENST00000587476 RNF166Q96A37 237 aaPredicted RBP8.05□□□□□ -1.12
TUBD1-207ENST00000587476 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
TUBD1-207ENST00000587476 ZC3H4Q9UPT8 1303 aaKnown RBP8.04□□□□□ -1.12
TUBD1-207ENST00000587476 ZBBXA8MT70 800 aa8.04□□□□□ -1.12
TUBD1-207ENST00000587476 ATP9BO43861 1147 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms