RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 CEP152O94986 1710 aa13.82□□□□□ -0.2
UBE2O-204ENST00000587127 PTPRTO14522 1441 aa13.81□□□□□ -0.2
UBE2O-204ENST00000587127 KIF3BO15066 747 aa13.81□□□□□ -0.2
UBE2O-204ENST00000587127 NGEFQ8N5V2 710 aa13.81□□□□□ -0.2
UBE2O-204ENST00000587127 TSR2Q969E8 191 aaKnown RBP13.81□□□□□ -0.2
UBE2O-204ENST00000587127 RWDD1Q9H446 243 aaPredicted RBP13.81□□□□□ -0.2
UBE2O-204ENST00000587127 PLCH2O75038 1416 aa13.81□□□□□ -0.2
UBE2O-204ENST00000587127 ERCC6L2Q5T890 1561 aa13.81□□□□□ -0.2
UBE2O-204ENST00000587127 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
UBE2O-204ENST00000587127 GOLGA6L3A6NEY3 463 aa13.8□□□□□ -0.2
UBE2O-204ENST00000587127 CHGAP10645 457 aaKnown RBP13.8□□□□□ -0.2
UBE2O-204ENST00000587127 PHF23Q9BUL5 403 aaPredicted RBP13.8□□□□□ -0.2
UBE2O-204ENST00000587127 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
UBE2O-204ENST00000587127 MVPQ14764 893 aaKnown RBP13.79□□□□□ -0.2
UBE2O-204ENST00000587127 TMEM132EQ6IEE7 984 aa13.78□□□□□ -0.2
UBE2O-204ENST00000587127 FTSJ3Q8IY81 847 aaKnown RBP13.78□□□□□ -0.2
UBE2O-204ENST00000587127 FSD2A1L4K1 749 aa13.78□□□□□ -0.2
UBE2O-204ENST00000587127 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
UBE2O-204ENST00000587127 TRAK2O60296 914 aa13.77□□□□□ -0.2
UBE2O-204ENST00000587127 U2AF1L5P0DN76 240 aaPredicted RBP13.77□□□□□ -0.2
UBE2O-204ENST00000587127 U2AF1Q01081 240 aaKnown RBP eCLIP13.77□□□□□ -0.2
UBE2O-204ENST00000587127 WDR63Q8IWG1 891 aa13.77□□□□□ -0.2
UBE2O-204ENST00000587127 RTEL1-TNFRSF6BF6WH68 1400 aa13.76□□□□□ -0.21
UBE2O-204ENST00000587127 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
UBE2O-204ENST00000587127 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
UBE2O-204ENST00000587127 ABCC1P33527 1531 aa13.76□□□□□ -0.21
UBE2O-204ENST00000587127 IQSEC2Q5JU85 1478 aa13.76□□□□□ -0.21
UBE2O-204ENST00000587127 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
UBE2O-204ENST00000587127 ABCA6Q8N139 1617 aa13.76□□□□□ -0.21
UBE2O-204ENST00000587127 ZKSCAN2Q63HK3 967 aa13.76□□□□□ -0.21
UBE2O-204ENST00000587127 CHMP5Q9NZZ3 219 aa13.75□□□□□ -0.21
UBE2O-204ENST00000587127 EXOSC9Q06265 439 aaKnown RBP13.75□□□□□ -0.21
UBE2O-204ENST00000587127 SMC4Q9NTJ3 1288 aa13.75□□□□□ -0.21
UBE2O-204ENST00000587127 ITPRIPQ8IWB1 547 aa13.75□□□□□ -0.21
UBE2O-204ENST00000587127 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
UBE2O-204ENST00000587127 TRIM27P14373 513 aa13.74□□□□□ -0.21
UBE2O-204ENST00000587127 MYH16Q9H6N6 1097 aa13.74□□□□□ -0.21
UBE2O-204ENST00000587127 KANK1Q14678 1352 aa13.73□□□□□ -0.21
UBE2O-204ENST00000587127 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
UBE2O-204ENST00000587127 SSH1Q8WYL5 1049 aa13.73□□□□□ -0.21
UBE2O-204ENST00000587127 AAMPQ13685 434 aa13.72□□□□□ -0.21
UBE2O-204ENST00000587127 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
UBE2O-204ENST00000587127 MAP3K4Q9Y6R4 1608 aa13.72□□□□□ -0.21
UBE2O-204ENST00000587127 NOS1P29475 1434 aa13.72□□□□□ -0.21
UBE2O-204ENST00000587127 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
UBE2O-204ENST00000587127 ZFYVE16Q7Z3T8 1539 aa13.72□□□□□ -0.21
UBE2O-204ENST00000587127 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.21
UBE2O-204ENST00000587127 PNNQ9H307 717 aaKnown RBP13.71□□□□□ -0.21
UBE2O-204ENST00000587127 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
UBE2O-204ENST00000587127 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
UBE2O-204ENST00000587127 ZNF518AQ6AHZ1 1483 aa13.71□□□□□ -0.22
UBE2O-204ENST00000587127 SAFB2Q14151 953 aaKnown RBP eCLIP13.71□□□□□ -0.22
UBE2O-204ENST00000587127 HSCBQ8IWL3 235 aa13.71□□□□□ -0.22
UBE2O-204ENST00000587127 NOB1Q9ULX3 412 aaKnown RBP13.71□□□□□ -0.22
UBE2O-204ENST00000587127 TMEM57Q8N5G2 664 aa13.7□□□□□ -0.22
UBE2O-204ENST00000587127 LNPKQ9C0E8 428 aa13.7□□□□□ -0.22
UBE2O-204ENST00000587127 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
UBE2O-204ENST00000587127 ZMYM3Q14202 1370 aa13.7□□□□□ -0.22
UBE2O-204ENST00000587127 TET3O43151 1660 aa13.69□□□□□ -0.22
UBE2O-204ENST00000587127 KIAA1210Q9ULL0 1709 aa13.69□□□□□ -0.22
UBE2O-204ENST00000587127 ERBB4Q15303 1308 aa13.69□□□□□ -0.22
UBE2O-204ENST00000587127 CLCN1P35523 988 aa13.68□□□□□ -0.22
UBE2O-204ENST00000587127 GRPEL1Q9HAV7 217 aa13.68□□□□□ -0.22
UBE2O-204ENST00000587127 MYOM2P54296 1465 aa13.68□□□□□ -0.22
UBE2O-204ENST00000587127 ATF7IPQ6VMQ6 1270 aa13.68□□□□□ -0.22
UBE2O-204ENST00000587127 GAS2L3Q86XJ1 694 aa13.68□□□□□ -0.22
UBE2O-204ENST00000587127 HDAC1Q13547 482 aaPredicted RBP13.68□□□□□ -0.22
UBE2O-204ENST00000587127 PKNOX2Q96KN3 472 aa13.68□□□□□ -0.22
UBE2O-204ENST00000587127 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
UBE2O-204ENST00000587127 SBNO2Q9Y2G9 1366 aa13.67□□□□□ -0.22
UBE2O-204ENST00000587127 MRE11P49959 708 aa13.67□□□□□ -0.22
UBE2O-204ENST00000587127 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
UBE2O-204ENST00000587127 SMC5Q8IY18 1101 aa13.67□□□□□ -0.22
UBE2O-204ENST00000587127 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
UBE2O-204ENST00000587127 TMPOP42166 694 aaKnown RBP13.67□□□□□ -0.22
UBE2O-204ENST00000587127 DDX19BQ9UMR2 479 aa13.67□□□□□ -0.22
UBE2O-204ENST00000587127 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
UBE2O-204ENST00000587127 VSIG10Q8N0Z9 540 aa13.66□□□□□ -0.22
UBE2O-204ENST00000587127 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
UBE2O-204ENST00000587127 CD109Q6YHK3 1445 aa13.66□□□□□ -0.22
UBE2O-204ENST00000587127 SHROOM2Q13796 1616 aa13.66□□□□□ -0.22
UBE2O-204ENST00000587127 CHD1O14646 1710 aa13.66□□□□□ -0.22
UBE2O-204ENST00000587127 DEPDC5O75140 1603 aa13.66□□□□□ -0.22
UBE2O-204ENST00000587127 ZCCHC11Q5TAX3 1644 aaKnown RBP13.66□□□□□ -0.22
UBE2O-204ENST00000587127 MROH2AA6NES4 1674 aa13.66□□□□□ -0.22
UBE2O-204ENST00000587127 DDIT3P35638 169 aa13.65□□□□□ -0.22
UBE2O-204ENST00000587127 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
UBE2O-204ENST00000587127 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
UBE2O-204ENST00000587127 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.23
UBE2O-204ENST00000587127 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
UBE2O-204ENST00000587127 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
UBE2O-204ENST00000587127 VWDEQ8N2E2 1590 aa13.64□□□□□ -0.23
UBE2O-204ENST00000587127 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
UBE2O-204ENST00000587127 HSP90AB1P08238 724 aaKnown RBP13.64□□□□□ -0.23
UBE2O-204ENST00000587127 ATP7AQ04656 1500 aa13.64□□□□□ -0.23
UBE2O-204ENST00000587127 CFAP65Q6ZU64 1925 aaKnown RBP13.63□□□□□ -0.23
UBE2O-204ENST00000587127 ESPNB1AK53 854 aa13.63□□□□□ -0.23
UBE2O-204ENST00000587127 RBM25P49756 843 aaKnown RBP13.62□□□□□ -0.23
UBE2O-204ENST00000587127 RIPK4P57078 832 aa13.62□□□□□ -0.23
UBE2O-204ENST00000587127 NUCB1Q02818 461 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms