RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CARD11Q9BXL7 1154 aa27.24■■□□□ 1.95
DDX39A-204ENST00000586558 NALCNQ8IZF0 1738 aa27.23■■□□□ 1.95
DDX39A-204ENST00000586558 EIF3AQ14152 1382 aaKnown RBP27.22■■□□□ 1.95
DDX39A-204ENST00000586558 TOM1O60784 492 aa27.21■■□□□ 1.95
DDX39A-204ENST00000586558 CADPS2Q86UW7 1296 aa27.2■■□□□ 1.94
DDX39A-204ENST00000586558 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.2■■□□□ 1.94
DDX39A-204ENST00000586558 CDC42BPGQ6DT37 1551 aa27.19■■□□□ 1.94
DDX39A-204ENST00000586558 UBAP1LF5GYI3 381 aa27.19■■□□□ 1.94
DDX39A-204ENST00000586558 ATF3P18847 181 aa27.19■■□□□ 1.94
DDX39A-204ENST00000586558 CENPJQ9HC77 1338 aaPredicted RBP27.16■■□□□ 1.94
DDX39A-204ENST00000586558 SAFB2Q14151 953 aaKnown RBP eCLIP27.16■■□□□ 1.94
DDX39A-204ENST00000586558 ADGRB2O60241 1585 aa27.16■■□□□ 1.94
DDX39A-204ENST00000586558 SLAIN2Q9P270 581 aa27.1■■□□□ 1.93
DDX39A-204ENST00000586558 MINK1Q8N4C8 1332 aaPredicted RBP27.1■■□□□ 1.93
DDX39A-204ENST00000586558 MST1RQ04912 1400 aa27.09■■□□□ 1.93
DDX39A-204ENST00000586558 USP47Q96K76 1375 aa27.08■■□□□ 1.93
DDX39A-204ENST00000586558 SBNO2Q9Y2G9 1366 aa27.08■■□□□ 1.93
DDX39A-204ENST00000586558 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.92
DDX39A-204ENST00000586558 HIRIP3Q9BW71 556 aaPredicted RBP27.06■■□□□ 1.92
DDX39A-204ENST00000586558 FMN2Q9NZ56 1722 aa27.04■■□□□ 1.92
DDX39A-204ENST00000586558 WASLO00401 505 aaPredicted RBP27.04■■□□□ 1.92
DDX39A-204ENST00000586558 PIP4K2BP78356 416 aa27.04■■□□□ 1.92
DDX39A-204ENST00000586558 C1orf167Q5SNV9 1468 aa27.04■■□□□ 1.92
DDX39A-204ENST00000586558 ANKARQ7Z5J8 1434 aa27.03■■□□□ 1.92
DDX39A-204ENST00000586558 SCAF1Q9H7N4 1312 aaKnown RBP27.02■■□□□ 1.92
DDX39A-204ENST00000586558 SLC24A1O60721 1099 aa27■■□□□ 1.91
DDX39A-204ENST00000586558 TULP4Q9NRJ4 1543 aa27■■□□□ 1.91
DDX39A-204ENST00000586558 ST20-MTHFSA0A0A6YYL1 179 aa26.99■■□□□ 1.91
DDX39A-204ENST00000586558 EVC2Q86UK5 1308 aa26.98■■□□□ 1.91
DDX39A-204ENST00000586558 ROBO1Q9Y6N7 1651 aa26.98■■□□□ 1.91
DDX39A-204ENST00000586558 ZEB1P37275 1124 aaPredicted RBP26.96■■□□□ 1.91
DDX39A-204ENST00000586558 BRINP3Q76B58 766 aa26.96■■□□□ 1.91
DDX39A-204ENST00000586558 CDK19Q9BWU1 502 aa26.96■■□□□ 1.91
DDX39A-204ENST00000586558 EIF4G2P78344 907 aaKnown RBP eCLIP26.95■■□□□ 1.9
DDX39A-204ENST00000586558 NUTM2FA1L443 756 aa26.94■■□□□ 1.9
DDX39A-204ENST00000586558 TESK2Q96S53 571 aa26.94■■□□□ 1.9
DDX39A-204ENST00000586558 ATP7BP35670 1465 aa26.93■■□□□ 1.9
DDX39A-204ENST00000586558 USP32Q8NFA0 1604 aa26.92■■□□□ 1.9
DDX39A-204ENST00000586558 SRPK2P78362 688 aaKnown RBP26.92■■□□□ 1.9
DDX39A-204ENST00000586558 ESCO1Q5FWF5 840 aa26.92■■□□□ 1.9
DDX39A-204ENST00000586558 ORAI2Q96SN7 254 aa26.91■■□□□ 1.9
DDX39A-204ENST00000586558 PRR36Q9H6K5 1346 aa26.9■■□□□ 1.9
DDX39A-204ENST00000586558 NUDT16Q96DE0 195 aaKnown RBP26.9■■□□□ 1.9
DDX39A-204ENST00000586558 KIF1AQ12756 1690 aa26.89■■□□□ 1.9
DDX39A-204ENST00000586558 AHDC1Q5TGY3 1603 aaPredicted RBP26.89■■□□□ 1.9
DDX39A-204ENST00000586558 HSPA5P11021 654 aaKnown RBP26.87■■□□□ 1.89
DDX39A-204ENST00000586558 PUS7Q96PZ0 661 aaKnown RBP26.87■■□□□ 1.89
DDX39A-204ENST00000586558 CCDC61Q9Y6R9 512 aa26.87■■□□□ 1.89
DDX39A-204ENST00000586558 ITSN1Q15811 1721 aa26.87■■□□□ 1.89
DDX39A-204ENST00000586558 TMF1P82094 1093 aa26.86■■□□□ 1.89
DDX39A-204ENST00000586558 CABP2Q9NPB3 220 aa26.86■■□□□ 1.89
DDX39A-204ENST00000586558 PHF8Q9UPP1 1060 aa26.86■■□□□ 1.89
DDX39A-204ENST00000586558 ATAD2Q6PL18 1390 aa26.85■■□□□ 1.89
DDX39A-204ENST00000586558 TOPAZ1Q8N9V7 1692 aa26.85■■□□□ 1.89
DDX39A-204ENST00000586558 NHSL1Q5SYE7 1610 aa26.84■■□□□ 1.89
DDX39A-204ENST00000586558 NPHP3Q7Z494 1330 aa26.84■■□□□ 1.89
DDX39A-204ENST00000586558 RGPD8O14715 1765 aaPredicted RBP26.83■■□□□ 1.89
DDX39A-204ENST00000586558 HSPA1LP34931 641 aa26.82■■□□□ 1.88
DDX39A-204ENST00000586558 CDCA8Q53HL2 280 aa26.82■■□□□ 1.88
DDX39A-204ENST00000586558 DISP3Q9P2K9 1392 aa26.81■■□□□ 1.88
DDX39A-204ENST00000586558 PPIP5K1Q6PFW1 1433 aa26.8■■□□□ 1.88
DDX39A-204ENST00000586558 PHLPP1O60346 1717 aa26.79■■□□□ 1.88
DDX39A-204ENST00000586558 PLEKHG3A1L390 1219 aa26.79■■□□□ 1.88
DDX39A-204ENST00000586558 FOXO3O43524 673 aa26.79■■□□□ 1.88
DDX39A-204ENST00000586558 COL16A1Q07092 1604 aaPredicted RBP26.77■■□□□ 1.88
DDX39A-204ENST00000586558 POLR3AO14802 1390 aaPredicted RBP26.77■■□□□ 1.88
DDX39A-204ENST00000586558 SOS2Q07890 1332 aaPredicted RBP26.77■■□□□ 1.88
DDX39A-204ENST00000586558 PMFBP1Q8TBY8 1022 aa26.77■■□□□ 1.88
DDX39A-204ENST00000586558 PXDNQ92626 1479 aa26.76■■□□□ 1.87
DDX39A-204ENST00000586558 NGDNQ8NEJ9 315 aaKnown RBP26.76■■□□□ 1.87
DDX39A-204ENST00000586558 NINLQ9Y2I6 1382 aa26.75■■□□□ 1.87
DDX39A-204ENST00000586558 DDX17Q92841 729 aaKnown RBP26.75■■□□□ 1.87
DDX39A-204ENST00000586558 CABP1Q9NZU7 370 aa26.74■■□□□ 1.87
DDX39A-204ENST00000586558 ACEP12821 1306 aa26.72■■□□□ 1.87
DDX39A-204ENST00000586558 PSME1Q06323 249 aa26.72■■□□□ 1.87
DDX39A-204ENST00000586558 KRT28Q7Z3Y7 464 aa26.71■■□□□ 1.87
DDX39A-204ENST00000586558 LRRC59Q96AG4 307 aaKnown RBP26.71■■□□□ 1.87
DDX39A-204ENST00000586558 SBNO1A3KN83 1393 aa26.69■■□□□ 1.86
DDX39A-204ENST00000586558 BRD4O60885 1362 aaPredicted RBP26.69■■□□□ 1.86
DDX39A-204ENST00000586558 XPCQ01831 940 aaPredicted RBP26.68■■□□□ 1.86
DDX39A-204ENST00000586558 JCADQ9P266 1359 aa26.68■■□□□ 1.86
DDX39A-204ENST00000586558 TMC1Q8TDI8 760 aa26.67■■□□□ 1.86
DDX39A-204ENST00000586558 CPSF1Q10570 1443 aaKnown RBP26.66■■□□□ 1.86
DDX39A-204ENST00000586558 ZNF692Q9BU19 519 aaPredicted RBP26.66■■□□□ 1.86
DDX39A-204ENST00000586558 TNS3Q68CZ2 1445 aa26.65■■□□□ 1.86
DDX39A-204ENST00000586558 SLC12A5Q9H2X9 1139 aa26.64■■□□□ 1.86
DDX39A-204ENST00000586558 TERF2IPQ9NYB0 399 aa26.64■■□□□ 1.86
DDX39A-204ENST00000586558 USP6P35125 1406 aa26.64■■□□□ 1.85
DDX39A-204ENST00000586558 SPATA31A3Q5VYP0 1347 aa26.64■■□□□ 1.85
DDX39A-204ENST00000586558 TRPM3Q9HCF6 1732 aaPredicted RBP26.62■■□□□ 1.85
DDX39A-204ENST00000586558 HDGFL2Q7Z4V5 671 aaPredicted RBP26.62■■□□□ 1.85
DDX39A-204ENST00000586558 SHPRHQ149N8 1683 aa26.62■■□□□ 1.85
DDX39A-204ENST00000586558 CD163L1Q9NR16 1453 aa26.62■■□□□ 1.85
DDX39A-204ENST00000586558 ARHGEF10O15013 1369 aa26.61■■□□□ 1.85
DDX39A-204ENST00000586558 PNPLA6Q8IY17 1366 aa26.61■■□□□ 1.85
DDX39A-204ENST00000586558 KTN1Q86UP2 1357 aaKnown RBP26.6■■□□□ 1.85
DDX39A-204ENST00000586558 AKAP12Q02952 1782 aa26.6■■□□□ 1.85
DDX39A-204ENST00000586558 ANKRD36BQ8N2N9 1353 aa26.59■■□□□ 1.85
DDX39A-204ENST00000586558 C11orf95C9JLR9 678 aaPredicted RBP26.59■■□□□ 1.85
DDX39A-204ENST00000586558 MYOM1P52179 1685 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms