RNA–Protein interactions for RNA: ENST00000586373.1

LINC01028-201, Transcript of long intergenic non-protein coding RNA 1028, humanhuman

TSL 1 (best) BASIC

Gene LINC01028, Length 1,045 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01028-201ENST00000586373 CAMSAP1Q5T5Y3 1602 aa12□□□□□ -0.49
LINC01028-201ENST00000586373 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
LINC01028-201ENST00000586373 MAP3K7O43318 606 aa11.99□□□□□ -0.49
LINC01028-201ENST00000586373 HPS5Q9UPZ3 1129 aa11.99□□□□□ -0.49
LINC01028-201ENST00000586373 ALKQ9UM73 1620 aa11.98□□□□□ -0.49
LINC01028-201ENST00000586373 SMAPO00193 183 aa11.98□□□□□ -0.49
LINC01028-201ENST00000586373 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.98□□□□□ -0.49
LINC01028-201ENST00000586373 NEO1Q92859 1461 aa11.97□□□□□ -0.49
LINC01028-201ENST00000586373 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
LINC01028-201ENST00000586373 ZFYVE16Q7Z3T8 1539 aa11.96□□□□□ -0.49
LINC01028-201ENST00000586373 KCNC4Q03721 635 aa11.96□□□□□ -0.49
LINC01028-201ENST00000586373 TSR3Q9UJK0 312 aaKnown RBP11.96□□□□□ -0.49
LINC01028-201ENST00000586373 RICTORQ6R327 1708 aa11.96□□□□□ -0.49
LINC01028-201ENST00000586373 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
LINC01028-201ENST00000586373 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
LINC01028-201ENST00000586373 LRCH3Q96II8 777 aa11.95□□□□□ -0.5
LINC01028-201ENST00000586373 DISP1Q96F81 1524 aa11.95□□□□□ -0.5
LINC01028-201ENST00000586373 PTPRKQ15262 1439 aa11.94□□□□□ -0.5
LINC01028-201ENST00000586373 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
LINC01028-201ENST00000586373 PACS2Q86VP3 889 aa11.94□□□□□ -0.5
LINC01028-201ENST00000586373 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
LINC01028-201ENST00000586373 GRXCR2A6NFK2 248 aa11.93□□□□□ -0.5
LINC01028-201ENST00000586373 E2F4Q16254 413 aa11.93□□□□□ -0.5
LINC01028-201ENST00000586373 EFCAB5A4FU69 1503 aa11.92□□□□□ -0.5
LINC01028-201ENST00000586373 C3P01024 1663 aa11.92□□□□□ -0.5
LINC01028-201ENST00000586373 DENND4BO75064 1496 aaPredicted RBP11.92□□□□□ -0.5
LINC01028-201ENST00000586373 ABCA9Q8IUA7 1624 aa11.92□□□□□ -0.5
LINC01028-201ENST00000586373 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
LINC01028-201ENST00000586373 PRSS12P56730 875 aa11.91□□□□□ -0.5
LINC01028-201ENST00000586373 IQGAP2Q13576 1575 aa11.9□□□□□ -0.5
LINC01028-201ENST00000586373 SAMD7Q7Z3H4 446 aa11.9□□□□□ -0.5
LINC01028-201ENST00000586373 CPS1P31327 1500 aa11.9□□□□□ -0.5
LINC01028-201ENST00000586373 CDHR5Q9HBB8 845 aa11.89□□□□□ -0.51
LINC01028-201ENST00000586373 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
LINC01028-201ENST00000586373 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
LINC01028-201ENST00000586373 FHOD3Q2V2M9 1422 aa11.87□□□□□ -0.51
LINC01028-201ENST00000586373 TRAPPC8Q9Y2L5 1435 aa11.87□□□□□ -0.51
LINC01028-201ENST00000586373 ZMYM4Q5VZL5 1548 aa11.87□□□□□ -0.51
LINC01028-201ENST00000586373 BIVM-ERCC5R4GMW8 1640 aa11.87□□□□□ -0.51
LINC01028-201ENST00000586373 OSBPP22059 807 aa11.87□□□□□ -0.51
LINC01028-201ENST00000586373 PPP4CP60510 307 aa11.87□□□□□ -0.51
LINC01028-201ENST00000586373 TATDN2Q93075 761 aa11.87□□□□□ -0.51
LINC01028-201ENST00000586373 ARIH1Q9Y4X5 557 aaPredicted RBP11.87□□□□□ -0.51
LINC01028-201ENST00000586373 TJAP1Q5JTD0 557 aa11.86□□□□□ -0.51
LINC01028-201ENST00000586373 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
LINC01028-201ENST00000586373 ARID3CA6NKF2 412 aa11.85□□□□□ -0.51
LINC01028-201ENST00000586373 PNMA3Q9UL41 463 aa11.85□□□□□ -0.51
LINC01028-201ENST00000586373 SUPT6HQ7KZ85 1726 aaKnown RBP11.83□□□□□ -0.52
LINC01028-201ENST00000586373 SHANK2Q9UPX8 1470 aa11.83□□□□□ -0.52
LINC01028-201ENST00000586373 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
LINC01028-201ENST00000586373 WDR70Q9NW82 654 aa11.82□□□□□ -0.52
LINC01028-201ENST00000586373 LRRC7Q96NW7 1537 aa11.81□□□□□ -0.52
LINC01028-201ENST00000586373 NUDT18Q6ZVK8 323 aa11.81□□□□□ -0.52
LINC01028-201ENST00000586373 TCOF1Q13428 1488 aaKnown RBP11.81□□□□□ -0.52
LINC01028-201ENST00000586373 C9orf84Q5VXU9 1444 aa11.8□□□□□ -0.52
LINC01028-201ENST00000586373 ZNF516Q92618 1163 aa11.8□□□□□ -0.52
LINC01028-201ENST00000586373 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
LINC01028-201ENST00000586373 PLA2R1Q13018 1463 aa11.8□□□□□ -0.52
LINC01028-201ENST00000586373 MAGI2Q86UL8 1455 aa11.8□□□□□ -0.52
LINC01028-201ENST00000586373 ATP10AO60312 1499 aa11.79□□□□□ -0.52
LINC01028-201ENST00000586373 Q6ZNB5 142 aa11.79□□□□□ -0.52
LINC01028-201ENST00000586373 MTRQ99707 1265 aa11.79□□□□□ -0.52
LINC01028-201ENST00000586373 NPDC1Q9NQX5 325 aaPredicted RBP11.79□□□□□ -0.52
LINC01028-201ENST00000586373 ABCA8O94911 1581 aa11.78□□□□□ -0.52
LINC01028-201ENST00000586373 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.52
LINC01028-201ENST00000586373 NBPF26B4DH59 902 aa11.77□□□□□ -0.53
LINC01028-201ENST00000586373 LCE2BO14633 110 aa11.77□□□□□ -0.53
LINC01028-201ENST00000586373 SENP3-EIF4A1A0A087X0R7 540 aa11.76□□□□□ -0.53
LINC01028-201ENST00000586373 YY1P25490 414 aa11.76□□□□□ -0.53
LINC01028-201ENST00000586373 APLP1P51693 650 aa11.76□□□□□ -0.53
LINC01028-201ENST00000586373 ESF1Q9H501 851 aaKnown RBP11.76□□□□□ -0.53
LINC01028-201ENST00000586373 IGF1RP08069 1367 aa11.76□□□□□ -0.53
LINC01028-201ENST00000586373 TTC13Q8NBP0 860 aa11.75□□□□□ -0.53
LINC01028-201ENST00000586373 RNF17Q9BXT8 1623 aaKnown RBP11.75□□□□□ -0.53
LINC01028-201ENST00000586373 PADI6Q6TGC4 694 aa11.74□□□□□ -0.53
LINC01028-201ENST00000586373 IL21Q9HBE4 155 aa11.74□□□□□ -0.53
LINC01028-201ENST00000586373 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
LINC01028-201ENST00000586373 RNF40O75150 1001 aa11.73□□□□□ -0.53
LINC01028-201ENST00000586373 PPP1R18Q6NYC8 613 aa11.73□□□□□ -0.53
LINC01028-201ENST00000586373 NKX2-3Q8TAU0 364 aa11.73□□□□□ -0.53
LINC01028-201ENST00000586373 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
LINC01028-201ENST00000586373 GFRA3O60609 400 aa11.71□□□□□ -0.53
LINC01028-201ENST00000586373 RXRBP28702 533 aa11.71□□□□□ -0.53
LINC01028-201ENST00000586373 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
LINC01028-201ENST00000586373 PRKD2Q9BZL6 878 aa11.71□□□□□ -0.53
LINC01028-201ENST00000586373 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
LINC01028-201ENST00000586373 ZNF142P52746 1687 aaPredicted RBP11.71□□□□□ -0.54
LINC01028-201ENST00000586373 MYO3AQ8NEV4 1616 aa11.71□□□□□ -0.54
LINC01028-201ENST00000586373 CFAP74Q9C0B2 1584 aa11.71□□□□□ -0.54
LINC01028-201ENST00000586373 RAPGEF6Q8TEU7 1601 aa11.7□□□□□ -0.54
LINC01028-201ENST00000586373 VWDEQ8N2E2 1590 aa11.7□□□□□ -0.54
LINC01028-201ENST00000586373 CEP170BQ9Y4F5 1589 aaPredicted RBP11.7□□□□□ -0.54
LINC01028-201ENST00000586373 ZNF772Q68DY9 489 aaPredicted RBP11.69□□□□□ -0.54
LINC01028-201ENST00000586373 MLLT3P42568 568 aaPredicted RBP11.68□□□□□ -0.54
LINC01028-201ENST00000586373 ATP10BO94823 1461 aa11.68□□□□□ -0.54
LINC01028-201ENST00000586373 NPATQ14207 1427 aa11.68□□□□□ -0.54
LINC01028-201ENST00000586373 LRP5O75197 1615 aa11.68□□□□□ -0.54
LINC01028-201ENST00000586373 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
LINC01028-201ENST00000586373 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
LINC01028-201ENST00000586373 HDGFP51858 240 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms