RNA–Protein interactions for RNA: ENST00000586057.5

TIMP2-204, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best) BASIC

Gene TIMP2, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-204ENST00000586057 PRAM1Q96QH2 718 aa13.4□□□□□ -0.26
TIMP2-204ENST00000586057 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
TIMP2-204ENST00000586057 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
TIMP2-204ENST00000586057 NAP1L5Q96NT1 182 aaPredicted RBP13.39□□□□□ -0.27
TIMP2-204ENST00000586057 MYOM2P54296 1465 aa13.39□□□□□ -0.27
TIMP2-204ENST00000586057 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
TIMP2-204ENST00000586057 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
TIMP2-204ENST00000586057 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
TIMP2-204ENST00000586057 WAPLQ7Z5K2 1190 aa13.38□□□□□ -0.27
TIMP2-204ENST00000586057 RRAGDQ9NQL2 400 aaPredicted RBP13.38□□□□□ -0.27
TIMP2-204ENST00000586057 TNRQ92752 1358 aa13.38□□□□□ -0.27
TIMP2-204ENST00000586057 AGLP35573 1532 aa13.38□□□□□ -0.27
TIMP2-204ENST00000586057 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
TIMP2-204ENST00000586057 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
TIMP2-204ENST00000586057 PREX1Q8TCU6 1659 aa13.36□□□□□ -0.27
TIMP2-204ENST00000586057 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
TIMP2-204ENST00000586057 RALBP1Q15311 655 aa13.35□□□□□ -0.27
TIMP2-204ENST00000586057 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
TIMP2-204ENST00000586057 NUTM2FA1L443 756 aa13.35□□□□□ -0.27
TIMP2-204ENST00000586057 PIK3C2BO00750 1634 aa13.34□□□□□ -0.27
TIMP2-204ENST00000586057 PNNQ9H307 717 aaKnown RBP13.34□□□□□ -0.27
TIMP2-204ENST00000586057 ZC3H13Q5T200 1668 aaKnown RBP13.33□□□□□ -0.27
TIMP2-204ENST00000586057 FRAT2O75474 233 aaPredicted RBP13.33□□□□□ -0.28
TIMP2-204ENST00000586057 NEXMIFQ5QGS0 1516 aa13.33□□□□□ -0.28
TIMP2-204ENST00000586057 SLC4A3P48751 1232 aa13.33□□□□□ -0.28
TIMP2-204ENST00000586057 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
TIMP2-204ENST00000586057 EVC2Q86UK5 1308 aa13.33□□□□□ -0.28
TIMP2-204ENST00000586057 LTKP29376 864 aa13.32□□□□□ -0.28
TIMP2-204ENST00000586057 A2ML1A8K2U0 1454 aa13.32□□□□□ -0.28
TIMP2-204ENST00000586057 NLRP13Q86W25 1043 aa13.32□□□□□ -0.28
TIMP2-204ENST00000586057 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.32□□□□□ -0.28
TIMP2-204ENST00000586057 CARD14Q9BXL6 1004 aa13.32□□□□□ -0.28
TIMP2-204ENST00000586057 NRXN1Q9ULB1 1477 aa13.31□□□□□ -0.28
TIMP2-204ENST00000586057 MYO5BQ9ULV0 1848 aa13.31□□□□□ -0.28
TIMP2-204ENST00000586057 EID1Q9Y6B2 187 aa13.31□□□□□ -0.28
TIMP2-204ENST00000586057 PNISRQ8TF01 805 aaKnown RBP13.31□□□□□ -0.28
TIMP2-204ENST00000586057 REREQ9P2R6 1566 aa13.3□□□□□ -0.28
TIMP2-204ENST00000586057 A0A0U1RQG5 324 aaPredicted RBP13.3□□□□□ -0.28
TIMP2-204ENST00000586057 PPLO60437 1756 aa13.3□□□□□ -0.28
TIMP2-204ENST00000586057 TMEM131LA2VDJ0 1609 aa13.29□□□□□ -0.28
TIMP2-204ENST00000586057 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
TIMP2-204ENST00000586057 L1TD1Q5T7N2 865 aaKnown RBP13.29□□□□□ -0.28
TIMP2-204ENST00000586057 RBM10P98175 930 aaKnown RBP13.29□□□□□ -0.28
TIMP2-204ENST00000586057 CDK19Q9BWU1 502 aa13.29□□□□□ -0.28
TIMP2-204ENST00000586057 LAMC1P11047 1609 aa13.29□□□□□ -0.28
TIMP2-204ENST00000586057 YTHDC2Q9H6S0 1430 aaKnown RBP13.28□□□□□ -0.28
TIMP2-204ENST00000586057 POLR1AO95602 1720 aaPredicted RBP13.28□□□□□ -0.28
TIMP2-204ENST00000586057 IQGAP1P46940 1657 aa13.28□□□□□ -0.28
TIMP2-204ENST00000586057 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
TIMP2-204ENST00000586057 METP08581 1390 aa13.27□□□□□ -0.28
TIMP2-204ENST00000586057 PLEKHH1Q9ULM0 1364 aa13.27□□□□□ -0.28
TIMP2-204ENST00000586057 MORC1Q86VD1 984 aa13.27□□□□□ -0.28
TIMP2-204ENST00000586057 ADGRB1O14514 1584 aa13.27□□□□□ -0.29
TIMP2-204ENST00000586057 NEURL4Q96JN8 1562 aa13.27□□□□□ -0.29
TIMP2-204ENST00000586057 PPP2R1AP30153 589 aa13.27□□□□□ -0.29
TIMP2-204ENST00000586057 CABP1Q9NZU7 370 aa13.26□□□□□ -0.29
TIMP2-204ENST00000586057 IFT172Q9UG01 1749 aa13.26□□□□□ -0.29
TIMP2-204ENST00000586057 CLCN1P35523 988 aa13.26□□□□□ -0.29
TIMP2-204ENST00000586057 TMEM2Q9UHN6 1383 aa13.26□□□□□ -0.29
TIMP2-204ENST00000586057 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
TIMP2-204ENST00000586057 SPATA31D1Q6ZQQ2 1576 aa13.26□□□□□ -0.29
TIMP2-204ENST00000586057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.26□□□□□ -0.29
TIMP2-204ENST00000586057 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
TIMP2-204ENST00000586057 RBM33Q96EV2 1170 aaKnown RBP13.26□□□□□ -0.29
TIMP2-204ENST00000586057 PARD3Q8TEW0 1356 aa13.25□□□□□ -0.29
TIMP2-204ENST00000586057 RRP1P56182 461 aaKnown RBP13.25□□□□□ -0.29
TIMP2-204ENST00000586057 WDR43Q15061 677 aaKnown RBP eCLIP13.25□□□□□ -0.29
TIMP2-204ENST00000586057 AAMPQ13685 434 aa13.24□□□□□ -0.29
TIMP2-204ENST00000586057 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
TIMP2-204ENST00000586057 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
TIMP2-204ENST00000586057 NSD3Q9BZ95 1437 aa13.24□□□□□ -0.29
TIMP2-204ENST00000586057 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
TIMP2-204ENST00000586057 KIAA1210Q9ULL0 1709 aa13.23□□□□□ -0.29
TIMP2-204ENST00000586057 CCDC146Q8IYE0 955 aa13.23□□□□□ -0.29
TIMP2-204ENST00000586057 ALKQ9UM73 1620 aa13.23□□□□□ -0.29
TIMP2-204ENST00000586057 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
TIMP2-204ENST00000586057 FGD1P98174 961 aa13.22□□□□□ -0.29
TIMP2-204ENST00000586057 SETBP1Q9Y6X0 1596 aa13.21□□□□□ -0.29
TIMP2-204ENST00000586057 ASXL1Q8IXJ9 1541 aa13.21□□□□□ -0.29
TIMP2-204ENST00000586057 AMOTL2Q9Y2J4 779 aa13.21□□□□□ -0.3
TIMP2-204ENST00000586057 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
TIMP2-204ENST00000586057 FBLN1P23142 703 aa13.2□□□□□ -0.3
TIMP2-204ENST00000586057 TERF2IPQ9NYB0 399 aa13.2□□□□□ -0.3
TIMP2-204ENST00000586057 CGNL1Q0VF96 1302 aa13.2□□□□□ -0.3
TIMP2-204ENST00000586057 HDGFL2Q7Z4V5 671 aaPredicted RBP13.2□□□□□ -0.3
TIMP2-204ENST00000586057 KDM5AP29375 1690 aaKnown RBP13.19□□□□□ -0.3
TIMP2-204ENST00000586057 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
TIMP2-204ENST00000586057 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
TIMP2-204ENST00000586057 PTPRMP28827 1452 aa13.19□□□□□ -0.3
TIMP2-204ENST00000586057 PDCL3Q9H2J4 239 aa13.18□□□□□ -0.3
TIMP2-204ENST00000586057 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
TIMP2-204ENST00000586057 WASLO00401 505 aaPredicted RBP13.18□□□□□ -0.3
TIMP2-204ENST00000586057 SOX12O15370 315 aa13.18□□□□□ -0.3
TIMP2-204ENST00000586057 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
TIMP2-204ENST00000586057 MTHFSP49914 203 aa13.17□□□□□ -0.3
TIMP2-204ENST00000586057 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
TIMP2-204ENST00000586057 RCAN3Q9UKA8 241 aa13.17□□□□□ -0.3
TIMP2-204ENST00000586057 TULP4Q9NRJ4 1543 aa13.16□□□□□ -0.3
TIMP2-204ENST00000586057 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
TIMP2-204ENST00000586057 PDE4CQ08493 712 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms