RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 ABCC10Q5T3U5 1492 aa9□□□□□ -0.97
CDH8-213ENST00000584966 FYCO1Q9BQS8 1478 aa9□□□□□ -0.97
CDH8-213ENST00000584966 GLI2P10070 1586 aa8.99□□□□□ -0.97
CDH8-213ENST00000584966 ARID3CA6NKF2 412 aa8.99□□□□□ -0.97
CDH8-213ENST00000584966 GTPBP6O43824 516 aaPredicted RBP8.99□□□□□ -0.97
CDH8-213ENST00000584966 DDX12PQ92771 950 aa8.99□□□□□ -0.97
CDH8-213ENST00000584966 VPS8Q8N3P4 1428 aa8.98□□□□□ -0.97
CDH8-213ENST00000584966 TSPOAP1O95153 1857 aa8.98□□□□□ -0.97
CDH8-213ENST00000584966 PPRC1Q5VV67 1664 aaKnown RBP8.98□□□□□ -0.97
CDH8-213ENST00000584966 WDR7Q9Y4E6 1490 aa8.98□□□□□ -0.97
CDH8-213ENST00000584966 DPYSL4O14531 572 aa8.98□□□□□ -0.97
CDH8-213ENST00000584966 MAGI3Q5TCQ9 1506 aa8.98□□□□□ -0.97
CDH8-213ENST00000584966 PRKCSHP14314 528 aaPredicted RBP8.97□□□□□ -0.97
CDH8-213ENST00000584966 TSR1Q2NL82 804 aaKnown RBP8.97□□□□□ -0.97
CDH8-213ENST00000584966 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
CDH8-213ENST00000584966 MAP3K4Q9Y6R4 1608 aa8.97□□□□□ -0.97
CDH8-213ENST00000584966 CFAP43Q8NDM7 1665 aa8.97□□□□□ -0.97
CDH8-213ENST00000584966 CCDC18Q5T9S5 1454 aa8.96□□□□□ -0.98
CDH8-213ENST00000584966 ABCA9Q8IUA7 1624 aa8.95□□□□□ -0.98
CDH8-213ENST00000584966 KIF14Q15058 1648 aa8.94□□□□□ -0.98
CDH8-213ENST00000584966 MAP3K7O43318 606 aa8.94□□□□□ -0.98
CDH8-213ENST00000584966 RNF40O75150 1001 aa8.94□□□□□ -0.98
CDH8-213ENST00000584966 FAM69CQ0P6D2 419 aa8.94□□□□□ -0.98
CDH8-213ENST00000584966 ATP1B4Q9UN42 357 aaPredicted RBP8.94□□□□□ -0.98
CDH8-213ENST00000584966 NBR1Q14596 966 aa8.93□□□□□ -0.98
CDH8-213ENST00000584966 CADPS2Q86UW7 1296 aa8.93□□□□□ -0.98
CDH8-213ENST00000584966 MAP3K1Q13233 1512 aa8.93□□□□□ -0.98
CDH8-213ENST00000584966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.93□□□□□ -0.98
CDH8-213ENST00000584966 TIAM1Q13009 1591 aa8.93□□□□□ -0.98
CDH8-213ENST00000584966 CDC42BPAQ5VT25 1732 aa8.92□□□□□ -0.98
CDH8-213ENST00000584966 CDC42BPBQ9Y5S2 1711 aa8.92□□□□□ -0.98
CDH8-213ENST00000584966 TTC37Q6PGP7 1564 aa8.92□□□□□ -0.98
CDH8-213ENST00000584966 TROQ12816 1431 aaPredicted RBP8.92□□□□□ -0.98
CDH8-213ENST00000584966 PLEKHD1A6NEE1 506 aa8.92□□□□□ -0.98
CDH8-213ENST00000584966 APLP1P51693 650 aa8.92□□□□□ -0.98
CDH8-213ENST00000584966 EN1Q05925 392 aaPredicted RBP8.92□□□□□ -0.98
CDH8-213ENST00000584966 CDCA7LQ96GN5 454 aa8.92□□□□□ -0.98
CDH8-213ENST00000584966 FAM198AQ9UFP1 575 aa8.92□□□□□ -0.98
CDH8-213ENST00000584966 POTECB2RU33 542 aa8.91□□□□□ -0.98
CDH8-213ENST00000584966 C3orf80F5H4A9 247 aa8.91□□□□□ -0.98
CDH8-213ENST00000584966 GGCXP38435 758 aa8.91□□□□□ -0.98
CDH8-213ENST00000584966 CAMK2BQ13554 666 aa8.9□□□□□ -0.98
CDH8-213ENST00000584966 PKDCCQ504Y2 493 aa8.9□□□□□ -0.98
CDH8-213ENST00000584966 PNMA3Q9UL41 463 aa8.9□□□□□ -0.98
CDH8-213ENST00000584966 MYO5CQ9NQX4 1742 aa8.9□□□□□ -0.98
CDH8-213ENST00000584966 COPS2P61201 443 aa8.89□□□□□ -0.99
CDH8-213ENST00000584966 MYT1Q01538 1121 aa8.89□□□□□ -0.99
CDH8-213ENST00000584966 TRIM67Q6ZTA4 783 aa8.89□□□□□ -0.99
CDH8-213ENST00000584966 TATDN2Q93075 761 aa8.89□□□□□ -0.99
CDH8-213ENST00000584966 CD109Q6YHK3 1445 aa8.88□□□□□ -0.99
CDH8-213ENST00000584966 PRSS12P56730 875 aa8.88□□□□□ -0.99
CDH8-213ENST00000584966 KANK4Q5T7N3 995 aaPredicted RBP8.88□□□□□ -0.99
CDH8-213ENST00000584966 CDK11AQ9UQ88 783 aaPredicted RBP8.88□□□□□ -0.99
CDH8-213ENST00000584966 LRRC9Q6ZRR7 1453 aa8.88□□□□□ -0.99
CDH8-213ENST00000584966 EHBP1L1Q8N3D4 1523 aa8.87□□□□□ -0.99
CDH8-213ENST00000584966 SUPT6HQ7KZ85 1726 aaKnown RBP8.87□□□□□ -0.99
CDH8-213ENST00000584966 PREX2Q70Z35 1606 aa8.87□□□□□ -0.99
CDH8-213ENST00000584966 NBPF26B4DH59 902 aa8.86□□□□□ -0.99
CDH8-213ENST00000584966 HDGFP51858 240 aaKnown RBP8.86□□□□□ -0.99
CDH8-213ENST00000584966 TPRNQ4KMQ1 711 aa8.86□□□□□ -0.99
CDH8-213ENST00000584966 ARAP3Q8WWN8 1544 aa8.85□□□□□ -0.99
CDH8-213ENST00000584966 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
CDH8-213ENST00000584966 PLCH2O75038 1416 aa8.85□□□□□ -0.99
CDH8-213ENST00000584966 MTUS2Q5JR59 1369 aa8.85□□□□□ -0.99
CDH8-213ENST00000584966 GPATCH8Q9UKJ3 1502 aaKnown RBP8.85□□□□□ -0.99
CDH8-213ENST00000584966 COL17A1Q9UMD9 1497 aaPredicted RBP8.84□□□□□ -0.99
CDH8-213ENST00000584966 SLC19A1P41440 591 aa8.84□□□□□ -0.99
CDH8-213ENST00000584966 NCOA2Q15596 1464 aa8.83□□□□□ -1
CDH8-213ENST00000584966 DGAT1O75907 488 aa8.83□□□□□ -1
CDH8-213ENST00000584966 NUDT18Q6ZVK8 323 aa8.83□□□□□ -1
CDH8-213ENST00000584966 TEX14Q8IWB6 1497 aa8.83□□□□□ -1
CDH8-213ENST00000584966 RICTORQ6R327 1708 aa8.83□□□□□ -1
CDH8-213ENST00000584966 ITSN2Q9NZM3 1697 aa8.82□□□□□ -1
CDH8-213ENST00000584966 NEO1Q92859 1461 aa8.82□□□□□ -1
CDH8-213ENST00000584966 CFAP74Q9C0B2 1584 aa8.82□□□□□ -1
CDH8-213ENST00000584966 ZPR1O75312 459 aa8.81□□□□□ -1
CDH8-213ENST00000584966 TREML4Q6UXN2 200 aa8.81□□□□□ -1
CDH8-213ENST00000584966 EMID1Q96A84 441 aaPredicted RBP8.81□□□□□ -1
CDH8-213ENST00000584966 FANCAO15360 1455 aa8.81□□□□□ -1
CDH8-213ENST00000584966 SAMD9LQ8IVG5 1584 aa8.81□□□□□ -1
CDH8-213ENST00000584966 AKNAQ7Z591 1439 aa8.8□□□□□ -1
CDH8-213ENST00000584966 KDM6BO15054 1643 aa8.8□□□□□ -1
CDH8-213ENST00000584966 FAM187AA6NFU0 413 aa8.8□□□□□ -1
CDH8-213ENST00000584966 RNF223E7ERA6 249 aa8.8□□□□□ -1
CDH8-213ENST00000584966 SPRYD7Q5W111 196 aa8.8□□□□□ -1
CDH8-213ENST00000584966 CERKQ8TCT0 537 aa8.8□□□□□ -1
CDH8-213ENST00000584966 FRMPD1Q5SYB0 1578 aa8.8□□□□□ -1
CDH8-213ENST00000584966 ARHGEF12Q9NZN5 1544 aa8.8□□□□□ -1
CDH8-213ENST00000584966 PHLDB1Q86UU1 1377 aa8.79□□□□□ -1
CDH8-213ENST00000584966 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
CDH8-213ENST00000584966 SWT1Q5T5J6 900 aaKnown RBP8.79□□□□□ -1
CDH8-213ENST00000584966 ARHGAP5Q13017 1502 aa8.79□□□□□ -1
CDH8-213ENST00000584966 CCNB3Q8WWL7 1395 aa8.78□□□□□ -1
CDH8-213ENST00000584966 PDIA6Q15084 440 aa8.78□□□□□ -1
CDH8-213ENST00000584966 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
CDH8-213ENST00000584966 ZNF598Q86UK7 904 aaKnown RBP8.78□□□□□ -1
CDH8-213ENST00000584966 NECTIN2Q92692 538 aa8.78□□□□□ -1
CDH8-213ENST00000584966 ABCC1P33527 1531 aa8.78□□□□□ -1
CDH8-213ENST00000584966 PRR20EP86478 221 aa8.77□□□□□ -1.01
CDH8-213ENST00000584966 PRR20CP86479 221 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms