RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 ZNF142P52746 1687 aaPredicted RBP14.19□□□□□ -0.14
CDK12-208ENST00000584336 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDK12-208ENST00000584336 LRPPRCP42704 1394 aaKnown RBP14.19□□□□□ -0.14
CDK12-208ENST00000584336 CEP170BQ9Y4F5 1589 aaPredicted RBP14.18□□□□□ -0.14
CDK12-208ENST00000584336 KNSTRNQ9Y448 316 aa14.18□□□□□ -0.14
CDK12-208ENST00000584336 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
CDK12-208ENST00000584336 HDGFP51858 240 aaKnown RBP14.16□□□□□ -0.14
CDK12-208ENST00000584336 SRPK2P78362 688 aaKnown RBP14.16□□□□□ -0.14
CDK12-208ENST00000584336 STRCQ7RTU9 1775 aa14.16□□□□□ -0.14
CDK12-208ENST00000584336 PNISRQ8TF01 805 aaKnown RBP14.16□□□□□ -0.14
CDK12-208ENST00000584336 CDK19Q9BWU1 502 aa14.16□□□□□ -0.14
CDK12-208ENST00000584336 ARHGAP23Q9P227 1491 aa14.16□□□□□ -0.14
CDK12-208ENST00000584336 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
CDK12-208ENST00000584336 ABCC11Q96J66 1382 aa14.15□□□□□ -0.14
CDK12-208ENST00000584336 PLEKHG1Q9ULL1 1385 aa14.15□□□□□ -0.14
CDK12-208ENST00000584336 SLIT1O75093 1534 aa14.14□□□□□ -0.15
CDK12-208ENST00000584336 SLC24A1O60721 1099 aa14.14□□□□□ -0.15
CDK12-208ENST00000584336 NSD3Q9BZ95 1437 aa14.13□□□□□ -0.15
CDK12-208ENST00000584336 THEMISQ8N1K5 641 aaPredicted RBP14.13□□□□□ -0.15
CDK12-208ENST00000584336 EID1Q9Y6B2 187 aa14.13□□□□□ -0.15
CDK12-208ENST00000584336 ROBO2Q9HCK4 1378 aa14.13□□□□□ -0.15
CDK12-208ENST00000584336 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
CDK12-208ENST00000584336 PPP2R1AP30153 589 aa14.13□□□□□ -0.15
CDK12-208ENST00000584336 DLC1Q96QB1 1528 aa14.13□□□□□ -0.15
CDK12-208ENST00000584336 BRD4O60885 1362 aaPredicted RBP14.12□□□□□ -0.15
CDK12-208ENST00000584336 NLRP13Q86W25 1043 aa14.12□□□□□ -0.15
CDK12-208ENST00000584336 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
CDK12-208ENST00000584336 MED14O60244 1454 aa14.12□□□□□ -0.15
CDK12-208ENST00000584336 CABP1Q9NZU7 370 aa14.09□□□□□ -0.15
CDK12-208ENST00000584336 CD163L1Q9NR16 1453 aa14.09□□□□□ -0.15
CDK12-208ENST00000584336 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
CDK12-208ENST00000584336 PUS7Q96PZ0 661 aaKnown RBP14.09□□□□□ -0.15
CDK12-208ENST00000584336 AMOTL2Q9Y2J4 779 aa14.09□□□□□ -0.15
CDK12-208ENST00000584336 A0A1W2PP64 1363 aa14.09□□□□□ -0.15
CDK12-208ENST00000584336 ANKRD36BQ8N2N9 1353 aa14.07□□□□□ -0.16
CDK12-208ENST00000584336 KNDC1Q76NI1 1749 aa14.07□□□□□ -0.16
CDK12-208ENST00000584336 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.07□□□□□ -0.16
CDK12-208ENST00000584336 CPS1P31327 1500 aa14.07□□□□□ -0.16
CDK12-208ENST00000584336 TECPR2O15040 1411 aa14.07□□□□□ -0.16
CDK12-208ENST00000584336 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
CDK12-208ENST00000584336 WASLO00401 505 aaPredicted RBP14.07□□□□□ -0.16
CDK12-208ENST00000584336 TBX22Q9Y458 520 aa14.07□□□□□ -0.16
CDK12-208ENST00000584336 NPC1L1Q9UHC9 1359 aa14.06□□□□□ -0.16
CDK12-208ENST00000584336 ANKLE2Q86XL3 938 aa14.06□□□□□ -0.16
CDK12-208ENST00000584336 PRR36Q9H6K5 1346 aa14.05□□□□□ -0.16
CDK12-208ENST00000584336 FAM135BQ49AJ0 1406 aa14.05□□□□□ -0.16
CDK12-208ENST00000584336 SIRT1Q96EB6 747 aa14.05□□□□□ -0.16
CDK12-208ENST00000584336 RBM33Q96EV2 1170 aaKnown RBP14.05□□□□□ -0.16
CDK12-208ENST00000584336 SALL2Q9Y467 1007 aaPredicted RBP14.05□□□□□ -0.16
CDK12-208ENST00000584336 ATAD2Q6PL18 1390 aa14.04□□□□□ -0.16
CDK12-208ENST00000584336 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
CDK12-208ENST00000584336 MORC1Q86VD1 984 aa14.03□□□□□ -0.16
CDK12-208ENST00000584336 KCNA6P17658 529 aa14.03□□□□□ -0.16
CDK12-208ENST00000584336 NUDT16Q96DE0 195 aaKnown RBP14.03□□□□□ -0.16
CDK12-208ENST00000584336 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.16
CDK12-208ENST00000584336 FBLN1P23142 703 aa14.01□□□□□ -0.17
CDK12-208ENST00000584336 ZBED9Q6R2W3 1325 aa14.01□□□□□ -0.17
CDK12-208ENST00000584336 PPIP5K1Q6PFW1 1433 aa14.01□□□□□ -0.17
CDK12-208ENST00000584336 FYB1O15117 783 aa14□□□□□ -0.17
CDK12-208ENST00000584336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14□□□□□ -0.17
CDK12-208ENST00000584336 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
CDK12-208ENST00000584336 CGNL1Q0VF96 1302 aa14□□□□□ -0.17
CDK12-208ENST00000584336 USP32Q8NFA0 1604 aa13.99□□□□□ -0.17
CDK12-208ENST00000584336 NPHP4O75161 1426 aaPredicted RBP13.99□□□□□ -0.17
CDK12-208ENST00000584336 TERF2IPQ9NYB0 399 aa13.99□□□□□ -0.17
CDK12-208ENST00000584336 HDGFL2Q7Z4V5 671 aaPredicted RBP13.98□□□□□ -0.17
CDK12-208ENST00000584336 NINLQ9Y2I6 1382 aa13.98□□□□□ -0.17
CDK12-208ENST00000584336 XRN1Q8IZH2 1706 aaKnown RBP13.98□□□□□ -0.17
CDK12-208ENST00000584336 ATP7BP35670 1465 aa13.97□□□□□ -0.17
CDK12-208ENST00000584336 MTHFSP49914 203 aa13.97□□□□□ -0.17
CDK12-208ENST00000584336 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
CDK12-208ENST00000584336 DIP2AQ14689 1571 aa13.97□□□□□ -0.17
CDK12-208ENST00000584336 NME9Q86XW9 330 aa13.96□□□□□ -0.18
CDK12-208ENST00000584336 CCDC61Q9Y6R9 512 aa13.96□□□□□ -0.18
CDK12-208ENST00000584336 CPSF1Q10570 1443 aaKnown RBP13.96□□□□□ -0.18
CDK12-208ENST00000584336 LTBP4Q8N2S1 1624 aa13.95□□□□□ -0.18
CDK12-208ENST00000584336 SUPT16HQ9Y5B9 1047 aaKnown RBP13.95□□□□□ -0.18
CDK12-208ENST00000584336 BLMP54132 1417 aaPredicted RBP13.95□□□□□ -0.18
CDK12-208ENST00000584336 PTCH1Q13635 1447 aa13.95□□□□□ -0.18
CDK12-208ENST00000584336 ADGRB2O60241 1585 aa13.95□□□□□ -0.18
CDK12-208ENST00000584336 NKTRP30414 1462 aaKnown RBP13.95□□□□□ -0.18
CDK12-208ENST00000584336 WDR43Q15061 677 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDK12-208ENST00000584336 PMFBP1Q8TBY8 1022 aa13.94□□□□□ -0.18
CDK12-208ENST00000584336 CERKQ8TCT0 537 aa13.94□□□□□ -0.18
CDK12-208ENST00000584336 ZNF335Q9H4Z2 1342 aaPredicted RBP13.94□□□□□ -0.18
CDK12-208ENST00000584336 ACEP12821 1306 aa13.93□□□□□ -0.18
CDK12-208ENST00000584336 CDC42BPGQ6DT37 1551 aa13.93□□□□□ -0.18
CDK12-208ENST00000584336 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
CDK12-208ENST00000584336 RGPD8O14715 1765 aaPredicted RBP13.92□□□□□ -0.18
CDK12-208ENST00000584336 IRX6P78412 446 aaPredicted RBP13.92□□□□□ -0.18
CDK12-208ENST00000584336 CDCA7LQ96GN5 454 aa13.92□□□□□ -0.18
CDK12-208ENST00000584336 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
CDK12-208ENST00000584336 NSD2O96028 1365 aa13.91□□□□□ -0.18
CDK12-208ENST00000584336 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
CDK12-208ENST00000584336 KIF20BQ96Q89 1820 aa13.91□□□□□ -0.18
CDK12-208ENST00000584336 FKBP8Q14318 412 aa13.91□□□□□ -0.18
CDK12-208ENST00000584336 TOPAZ1Q8N9V7 1692 aa13.9□□□□□ -0.18
CDK12-208ENST00000584336 PIK3R4Q99570 1358 aa13.9□□□□□ -0.18
CDK12-208ENST00000584336 AKAP12Q02952 1782 aa13.89□□□□□ -0.19
CDK12-208ENST00000584336 PLEKHG3A1L390 1219 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms