RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 CDCA8Q53HL2 280 aa7.51□□□□□ -1.21
CRLF3-204ENST00000583527 FBXO31Q5XUX0 539 aaPredicted RBP7.51□□□□□ -1.21
CRLF3-204ENST00000583527 MON2Q7Z3U7 1717 aa7.51□□□□□ -1.21
CRLF3-204ENST00000583527 ZBED9Q6R2W3 1325 aa7.51□□□□□ -1.21
CRLF3-204ENST00000583527 ADAMTSL3P82987 1691 aa7.51□□□□□ -1.21
CRLF3-204ENST00000583527 XRN1Q8IZH2 1706 aaKnown RBP7.5□□□□□ -1.21
CRLF3-204ENST00000583527 CNGB1Q14028 1251 aaPredicted RBP7.5□□□□□ -1.21
CRLF3-204ENST00000583527 RALBP1Q15311 655 aa7.5□□□□□ -1.21
CRLF3-204ENST00000583527 SLIT1O75093 1534 aa7.5□□□□□ -1.21
CRLF3-204ENST00000583527 TECPR2O15040 1411 aa7.5□□□□□ -1.21
CRLF3-204ENST00000583527 NSD3Q9BZ95 1437 aa7.5□□□□□ -1.21
CRLF3-204ENST00000583527 NRKQ7Z2Y5 1582 aa7.5□□□□□ -1.21
CRLF3-204ENST00000583527 ZMYM3Q14202 1370 aa7.49□□□□□ -1.21
CRLF3-204ENST00000583527 AKAP12Q02952 1782 aa7.49□□□□□ -1.21
CRLF3-204ENST00000583527 NUTM2DQ5VT03 806 aaPredicted RBP7.49□□□□□ -1.21
CRLF3-204ENST00000583527 NLRP13Q86W25 1043 aa7.49□□□□□ -1.21
CRLF3-204ENST00000583527 ARHGAP23Q9P227 1491 aa7.49□□□□□ -1.21
CRLF3-204ENST00000583527 INSRP06213 1382 aa7.48□□□□□ -1.21
CRLF3-204ENST00000583527 VGFO15240 615 aaPredicted RBP7.48□□□□□ -1.21
CRLF3-204ENST00000583527 CDC42BPGQ6DT37 1551 aa7.48□□□□□ -1.21
CRLF3-204ENST00000583527 FAM9BQ8IZU0 186 aa7.48□□□□□ -1.21
CRLF3-204ENST00000583527 PANK3Q9H999 370 aa7.48□□□□□ -1.21
CRLF3-204ENST00000583527 NINLQ9Y2I6 1382 aa7.47□□□□□ -1.21
CRLF3-204ENST00000583527 PER1O15534 1290 aaPredicted RBP7.47□□□□□ -1.21
CRLF3-204ENST00000583527 TMEM132EQ6IEE7 984 aa7.47□□□□□ -1.21
CRLF3-204ENST00000583527 TRAK1Q9UPV9 953 aa7.47□□□□□ -1.21
CRLF3-204ENST00000583527 ATP7BP35670 1465 aa7.47□□□□□ -1.21
CRLF3-204ENST00000583527 ANKRD36BQ8N2N9 1353 aa7.46□□□□□ -1.21
CRLF3-204ENST00000583527 TMEM2Q9UHN6 1383 aa7.46□□□□□ -1.21
CRLF3-204ENST00000583527 ADAMTS13Q76LX8 1427 aa7.46□□□□□ -1.21
CRLF3-204ENST00000583527 SMG6Q86US8 1419 aaKnown RBP7.46□□□□□ -1.21
CRLF3-204ENST00000583527 AMER1Q5JTC6 1135 aaPredicted RBP7.46□□□□□ -1.22
CRLF3-204ENST00000583527 CC2D1BQ5T0F9 858 aaKnown RBP7.46□□□□□ -1.22
CRLF3-204ENST00000583527 ESF1Q9H501 851 aaKnown RBP7.46□□□□□ -1.22
CRLF3-204ENST00000583527 SUPT16HQ9Y5B9 1047 aaKnown RBP7.46□□□□□ -1.22
CRLF3-204ENST00000583527 CD163L1Q9NR16 1453 aa7.46□□□□□ -1.22
CRLF3-204ENST00000583527 ATAD2Q6PL18 1390 aa7.46□□□□□ -1.22
CRLF3-204ENST00000583527 SLC24A1O60721 1099 aa7.45□□□□□ -1.22
CRLF3-204ENST00000583527 TMC1Q8TDI8 760 aa7.45□□□□□ -1.22
CRLF3-204ENST00000583527 STAG3Q9UJ98 1225 aa7.45□□□□□ -1.22
CRLF3-204ENST00000583527 A0A1W2PP64 1363 aa7.45□□□□□ -1.22
CRLF3-204ENST00000583527 NSD2O96028 1365 aa7.45□□□□□ -1.22
CRLF3-204ENST00000583527 PLEKHG1Q9ULL1 1385 aa7.45□□□□□ -1.22
CRLF3-204ENST00000583527 PTCH1Q13635 1447 aa7.44□□□□□ -1.22
CRLF3-204ENST00000583527 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.44□□□□□ -1.22
CRLF3-204ENST00000583527 IQSEC2Q5JU85 1478 aa7.44□□□□□ -1.22
CRLF3-204ENST00000583527 PNISRQ8TF01 805 aaKnown RBP7.44□□□□□ -1.22
CRLF3-204ENST00000583527 KNSTRNQ9Y448 316 aa7.44□□□□□ -1.22
CRLF3-204ENST00000583527 EVC2Q86UK5 1308 aa7.44□□□□□ -1.22
CRLF3-204ENST00000583527 ABCC11Q96J66 1382 aa7.44□□□□□ -1.22
CRLF3-204ENST00000583527 PLEKHH1Q9ULM0 1364 aa7.44□□□□□ -1.22
CRLF3-204ENST00000583527 NALCNQ8IZF0 1738 aa7.44□□□□□ -1.22
CRLF3-204ENST00000583527 FAM135BQ49AJ0 1406 aa7.44□□□□□ -1.22
CRLF3-204ENST00000583527 MED14O60244 1454 aa7.43□□□□□ -1.22
CRLF3-204ENST00000583527 NEFLP07196 543 aa7.43□□□□□ -1.22
CRLF3-204ENST00000583527 FMN2Q9NZ56 1722 aa7.43□□□□□ -1.22
CRLF3-204ENST00000583527 METP08581 1390 aa7.43□□□□□ -1.22
CRLF3-204ENST00000583527 COL3A1P02461 1466 aaPredicted RBP7.43□□□□□ -1.22
CRLF3-204ENST00000583527 PPP2R1AP30153 589 aa7.42□□□□□ -1.22
CRLF3-204ENST00000583527 PRAM1Q96QH2 718 aa7.42□□□□□ -1.22
CRLF3-204ENST00000583527 STK26Q9P289 416 aa7.42□□□□□ -1.22
CRLF3-204ENST00000583527 ZNF219Q9P2Y4 722 aaPredicted RBP7.42□□□□□ -1.22
CRLF3-204ENST00000583527 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.41□□□□□ -1.22
CRLF3-204ENST00000583527 RBM42Q9BTD8 480 aaKnown RBP7.41□□□□□ -1.22
CRLF3-204ENST00000583527 MINK1Q8N4C8 1332 aaPredicted RBP7.41□□□□□ -1.22
CRLF3-204ENST00000583527 NKTRP30414 1462 aaKnown RBP7.41□□□□□ -1.22
CRLF3-204ENST00000583527 SLC4A2P04920 1241 aa7.4□□□□□ -1.22
CRLF3-204ENST00000583527 SAFB2Q14151 953 aaKnown RBP eCLIP7.4□□□□□ -1.22
CRLF3-204ENST00000583527 PUS7Q96PZ0 661 aaKnown RBP7.4□□□□□ -1.22
CRLF3-204ENST00000583527 CARD14Q9BXL6 1004 aa7.4□□□□□ -1.22
CRLF3-204ENST00000583527 ROBO2Q9HCK4 1378 aa7.4□□□□□ -1.22
CRLF3-204ENST00000583527 NWD1Q149M9 1564 aa7.4□□□□□ -1.22
CRLF3-204ENST00000583527 USP54Q70EL1 1684 aa7.4□□□□□ -1.23
CRLF3-204ENST00000583527 LRRC7Q96NW7 1537 aa7.39□□□□□ -1.23
CRLF3-204ENST00000583527 PTPRUQ92729 1446 aa7.39□□□□□ -1.23
CRLF3-204ENST00000583527 POLR3AO14802 1390 aaPredicted RBP7.39□□□□□ -1.23
CRLF3-204ENST00000583527 CGNL1Q0VF96 1302 aa7.39□□□□□ -1.23
CRLF3-204ENST00000583527 CABP2Q9NPB3 220 aa7.39□□□□□ -1.23
CRLF3-204ENST00000583527 NUDCQ9Y266 331 aa7.39□□□□□ -1.23
CRLF3-204ENST00000583527 CHD2O14647 1828 aaKnown RBP7.38□□□□□ -1.23
CRLF3-204ENST00000583527 RGPD8O14715 1765 aaPredicted RBP7.38□□□□□ -1.23
CRLF3-204ENST00000583527 MARF1Q9Y4F3 1742 aaKnown RBP7.38□□□□□ -1.23
CRLF3-204ENST00000583527 PPIP5K1Q6PFW1 1433 aa7.38□□□□□ -1.23
CRLF3-204ENST00000583527 SRPK2P78362 688 aaKnown RBP7.38□□□□□ -1.23
CRLF3-204ENST00000583527 FKBP8Q14318 412 aa7.38□□□□□ -1.23
CRLF3-204ENST00000583527 POGKQ9P215 609 aa7.38□□□□□ -1.23
CRLF3-204ENST00000583527 SETD1BQ9UPS6 1966 aaKnown RBP7.38□□□□□ -1.23
CRLF3-204ENST00000583527 CDK12Q9NYV4 1490 aaPredicted RBP7.37□□□□□ -1.23
CRLF3-204ENST00000583527 EDC4Q6P2E9 1401 aaKnown RBP7.37□□□□□ -1.23
CRLF3-204ENST00000583527 WDR43Q15061 677 aaKnown RBP eCLIP7.37□□□□□ -1.23
CRLF3-204ENST00000583527 SLC12A5Q9H2X9 1139 aa7.37□□□□□ -1.23
CRLF3-204ENST00000583527 PIK3C2AO00443 1686 aa7.37□□□□□ -1.23
CRLF3-204ENST00000583527 SENP3-EIF4A1A0A087X0R7 540 aa7.36□□□□□ -1.23
CRLF3-204ENST00000583527 CEBPAP49715 358 aaPredicted RBP7.36□□□□□ -1.23
CRLF3-204ENST00000583527 BCANQ96GW7 911 aa7.36□□□□□ -1.23
CRLF3-204ENST00000583527 MAP2P11137 1827 aaKnown RBP7.36□□□□□ -1.23
CRLF3-204ENST00000583527 CPSF1Q10570 1443 aaKnown RBP7.35□□□□□ -1.23
CRLF3-204ENST00000583527 PEAK1Q9H792 1746 aa7.35□□□□□ -1.23
CRLF3-204ENST00000583527 LTKP29376 864 aa7.34□□□□□ -1.23
CRLF3-204ENST00000583527 MORC1Q86VD1 984 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms