RNA–Protein interactions for RNA: ENST00000583482.6

SPECC1-221, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-221ENST00000583482 IFFO2Q5TF58 517 aa25.96■■□□□ 1.75
SPECC1-221ENST00000583482 UNC5CLQ8IV45 518 aa25.96■■□□□ 1.75
SPECC1-221ENST00000583482 CHIC2Q9UKJ5 165 aa25.96■■□□□ 1.75
SPECC1-221ENST00000583482 PXDNQ92626 1479 aa25.95■■□□□ 1.74
SPECC1-221ENST00000583482 SEPT12Q8IYM1 358 aa25.94■■□□□ 1.74
SPECC1-221ENST00000583482 BAG6P46379 1132 aa25.93■■□□□ 1.74
SPECC1-221ENST00000583482 ADGRL2O95490 1459 aa25.91■■□□□ 1.74
SPECC1-221ENST00000583482 R3HDM1Q15032 1099 aaKnown RBP25.9■■□□□ 1.74
SPECC1-221ENST00000583482 KRT27Q7Z3Y8 459 aa25.87■■□□□ 1.73
SPECC1-221ENST00000583482 RGPD1P0DJD0 1748 aa25.87■■□□□ 1.73
SPECC1-221ENST00000583482 ANKRD50Q9ULJ7 1429 aa25.86■■□□□ 1.73
SPECC1-221ENST00000583482 USP32Q8NFA0 1604 aa25.85■■□□□ 1.73
SPECC1-221ENST00000583482 ONECUT3O60422 494 aaPredicted RBP25.85■■□□□ 1.73
SPECC1-221ENST00000583482 EN1Q05925 392 aaPredicted RBP25.84■■□□□ 1.73
SPECC1-221ENST00000583482 NPHP3Q7Z494 1330 aa25.84■■□□□ 1.73
SPECC1-221ENST00000583482 VPS8Q8N3P4 1428 aa25.82■■□□□ 1.72
SPECC1-221ENST00000583482 PLCH1Q4KWH8 1693 aa25.82■■□□□ 1.72
SPECC1-221ENST00000583482 TNS1Q9HBL0 1735 aaKnown RBP25.82■■□□□ 1.72
SPECC1-221ENST00000583482 NWD2Q9ULI1 1742 aa25.8■■□□□ 1.72
SPECC1-221ENST00000583482 VPS72Q15906 364 aa25.8■■□□□ 1.72
SPECC1-221ENST00000583482 ROBO2Q9HCK4 1378 aa25.8■■□□□ 1.72
SPECC1-221ENST00000583482 DISP2A7MBM2 1401 aa25.8■■□□□ 1.72
SPECC1-221ENST00000583482 XPCQ01831 940 aaPredicted RBP25.78■■□□□ 1.72
SPECC1-221ENST00000583482 PRAG1Q86YV5 1406 aa25.76■■□□□ 1.71
SPECC1-221ENST00000583482 NEXMIFQ5QGS0 1516 aa25.75■■□□□ 1.71
SPECC1-221ENST00000583482 CDC42BPGQ6DT37 1551 aa25.74■■□□□ 1.71
SPECC1-221ENST00000583482 FOXO3O43524 673 aa25.72■■□□□ 1.71
SPECC1-221ENST00000583482 ESCO1Q5FWF5 840 aa25.72■■□□□ 1.71
SPECC1-221ENST00000583482 CAMTA1Q9Y6Y1 1673 aa25.71■■□□□ 1.71
SPECC1-221ENST00000583482 SENP3-EIF4A1A0A087X0R7 540 aa25.7■■□□□ 1.7
SPECC1-221ENST00000583482 EZH2Q15910 746 aaKnown RBP25.68■■□□□ 1.7
SPECC1-221ENST00000583482 NRAPQ86VF7 1730 aa25.68■■□□□ 1.7
SPECC1-221ENST00000583482 ABCA3Q99758 1704 aa25.68■■□□□ 1.7
SPECC1-221ENST00000583482 SPATA31A3Q5VYP0 1347 aa25.66■■□□□ 1.7
SPECC1-221ENST00000583482 HFM1A2PYH4 1435 aa25.66■■□□□ 1.7
SPECC1-221ENST00000583482 CCDC9Q9Y3X0 531 aaKnown RBP25.66■■□□□ 1.7
SPECC1-221ENST00000583482 UTRNP46939 3433 aa25.65■■□□□ 1.7
SPECC1-221ENST00000583482 ZNF326Q5BKZ1 582 aaKnown RBP25.65■■□□□ 1.7
SPECC1-221ENST00000583482 LRPPRCP42704 1394 aaKnown RBP25.65■■□□□ 1.7
SPECC1-221ENST00000583482 RREB1Q92766 1687 aa25.64■■□□□ 1.7
SPECC1-221ENST00000583482 ZNF784Q8NCA9 323 aaPredicted RBP25.64■■□□□ 1.7
SPECC1-221ENST00000583482 ADGRB2O60241 1585 aa25.64■■□□□ 1.69
SPECC1-221ENST00000583482 FAM182BQ5T319 152 aa25.63■■□□□ 1.69
SPECC1-221ENST00000583482 NINLQ9Y2I6 1382 aa25.63■■□□□ 1.69
SPECC1-221ENST00000583482 A0A0G2JS52 829 aa25.62■■□□□ 1.69
SPECC1-221ENST00000583482 MYT1Q01538 1121 aa25.62■■□□□ 1.69
SPECC1-221ENST00000583482 CAMKK2Q96RR4 588 aa25.62■■□□□ 1.69
SPECC1-221ENST00000583482 CEP350Q5VT06 3117 aa25.62■■□□□ 1.69
SPECC1-221ENST00000583482 NUP188Q5SRE5 1749 aa25.62■■□□□ 1.69
SPECC1-221ENST00000583482 FAM98CQ17RN3 349 aaKnown RBP25.61■■□□□ 1.69
SPECC1-221ENST00000583482 THSD7AQ9UPZ6 1657 aa25.59■■□□□ 1.69
SPECC1-221ENST00000583482 KIF1AQ12756 1690 aa25.58■■□□□ 1.68
SPECC1-221ENST00000583482 CCDC144AA2RUR9 1427 aa25.57■■□□□ 1.68
SPECC1-221ENST00000583482 DCAF8L1A6NGE4 600 aa25.57■■□□□ 1.68
SPECC1-221ENST00000583482 CLTCL1P53675 1640 aa25.56■■□□□ 1.68
SPECC1-221ENST00000583482 C1QTNF8P60827 252 aa25.55■■□□□ 1.68
SPECC1-221ENST00000583482 CABLES1Q8TDN4 633 aa25.55■■□□□ 1.68
SPECC1-221ENST00000583482 PARD3Q8TEW0 1356 aa25.55■■□□□ 1.68
SPECC1-221ENST00000583482 NAIPQ13075 1403 aa25.54■■□□□ 1.68
SPECC1-221ENST00000583482 TNS3Q68CZ2 1445 aa25.54■■□□□ 1.68
SPECC1-221ENST00000583482 PPP1R1BQ9UD71 204 aaPredicted RBP25.53■■□□□ 1.68
SPECC1-221ENST00000583482 FMN2Q9NZ56 1722 aa25.52■■□□□ 1.68
SPECC1-221ENST00000583482 NUTM2FA1L443 756 aa25.51■■□□□ 1.67
SPECC1-221ENST00000583482 FAM83GA6ND36 823 aa25.51■■□□□ 1.67
SPECC1-221ENST00000583482 HAP1P54257 671 aaPredicted RBP25.51■■□□□ 1.67
SPECC1-221ENST00000583482 NUP155O75694 1391 aa25.5■■□□□ 1.67
SPECC1-221ENST00000583482 SPON1Q9HCB6 807 aa25.5■■□□□ 1.67
SPECC1-221ENST00000583482 KIF1BO60333 1816 aa25.49■■□□□ 1.67
SPECC1-221ENST00000583482 KRT28Q7Z3Y7 464 aa25.48■■□□□ 1.67
SPECC1-221ENST00000583482 KCNQ2O43526 872 aa25.47■■□□□ 1.67
SPECC1-221ENST00000583482 TRIM37O94972 964 aa25.47■■□□□ 1.67
SPECC1-221ENST00000583482 CHD4Q14839 1912 aa25.46■■□□□ 1.67
SPECC1-221ENST00000583482 PLEKHG5O94827 1062 aa25.45■■□□□ 1.66
SPECC1-221ENST00000583482 RGPD8O14715 1765 aaPredicted RBP25.44■■□□□ 1.66
SPECC1-221ENST00000583482 COL14A1Q05707 1796 aaKnown RBP25.44■■□□□ 1.66
SPECC1-221ENST00000583482 SPATA31A5Q5VU36 1347 aa25.42■■□□□ 1.66
SPECC1-221ENST00000583482 SPATA31A7Q8IWB4 1347 aa25.42■■□□□ 1.66
SPECC1-221ENST00000583482 APBA3O96018 575 aa25.42■■□□□ 1.66
SPECC1-221ENST00000583482 FAM50AQ14320 339 aaKnown RBP25.42■■□□□ 1.66
SPECC1-221ENST00000583482 BTG4Q9NY30 223 aa25.42■■□□□ 1.66
SPECC1-221ENST00000583482 NRKQ7Z2Y5 1582 aa25.42■■□□□ 1.66
SPECC1-221ENST00000583482 SBNO1A3KN83 1393 aa25.4■■□□□ 1.66
SPECC1-221ENST00000583482 NBPF8Q3BBV2 869 aa25.39■■□□□ 1.66
SPECC1-221ENST00000583482 NBPF14Q5TI25 921 aa25.39■■□□□ 1.66
SPECC1-221ENST00000583482 FAM196AQ6ZSG2 479 aa25.39■■□□□ 1.66
SPECC1-221ENST00000583482 CASZ1Q86V15 1759 aa25.39■■□□□ 1.65
SPECC1-221ENST00000583482 TECPR2O15040 1411 aa25.38■■□□□ 1.65
SPECC1-221ENST00000583482 VGFO15240 615 aaPredicted RBP25.38■■□□□ 1.65
SPECC1-221ENST00000583482 ARHGEF10O15013 1369 aa25.38■■□□□ 1.65
SPECC1-221ENST00000583482 PPLO60437 1756 aa25.38■■□□□ 1.65
SPECC1-221ENST00000583482 MYOM1P52179 1685 aa25.37■■□□□ 1.65
SPECC1-221ENST00000583482 ROCK1Q13464 1354 aa25.36■■□□□ 1.65
SPECC1-221ENST00000583482 IFT172Q9UG01 1749 aa25.35■■□□□ 1.65
SPECC1-221ENST00000583482 WAPLQ7Z5K2 1190 aa25.35■■□□□ 1.65
SPECC1-221ENST00000583482 RRBP1Q9P2E9 1410 aaKnown RBP25.35■■□□□ 1.65
SPECC1-221ENST00000583482 KNDC1Q76NI1 1749 aa25.34■■□□□ 1.65
SPECC1-221ENST00000583482 PLEKHH1Q9ULM0 1364 aa25.34■■□□□ 1.65
SPECC1-221ENST00000583482 PSME1Q06323 249 aa25.34■■□□□ 1.65
SPECC1-221ENST00000583482 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
SPECC1-221ENST00000583482 TRPM3Q9HCF6 1732 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms