RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
SKA2-207ENST00000583380 CTIFO43310 598 aaKnown RBP11.52□□□□□ -0.57
SKA2-207ENST00000583380 XPCQ01831 940 aaPredicted RBP11.52□□□□□ -0.57
SKA2-207ENST00000583380 KRT222Q8N1A0 295 aa11.52□□□□□ -0.57
SKA2-207ENST00000583380 MYCBPQ99417 103 aaPredicted RBP11.52□□□□□ -0.57
SKA2-207ENST00000583380 CWC15Q9P013 229 aaKnown RBP11.52□□□□□ -0.57
SKA2-207ENST00000583380 NKTRP30414 1462 aaKnown RBP11.51□□□□□ -0.57
SKA2-207ENST00000583380 RALGAPBQ86X10 1494 aa11.51□□□□□ -0.57
SKA2-207ENST00000583380 KIF1CO43896 1103 aaKnown RBP11.51□□□□□ -0.57
SKA2-207ENST00000583380 FKBP5Q13451 457 aaPredicted RBP11.51□□□□□ -0.57
SKA2-207ENST00000583380 NOM1Q5C9Z4 860 aaKnown RBP11.51□□□□□ -0.57
SKA2-207ENST00000583380 E9PCH4 1651 aa11.51□□□□□ -0.57
SKA2-207ENST00000583380 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
SKA2-207ENST00000583380 PLXNC1O60486 1568 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 KDM5CP41229 1560 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 SUPT6HQ7KZ85 1726 aaKnown RBP11.5□□□□□ -0.57
SKA2-207ENST00000583380 E9PSI1 815 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 CACNB1Q02641 598 aaPredicted RBP11.5□□□□□ -0.57
SKA2-207ENST00000583380 CDCA8Q53HL2 280 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 TEX35Q5T0J7 233 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 LRSAM1Q6UWE0 723 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 SLC26A8Q96RN1 970 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 PAXBP1Q9Y5B6 917 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 EHBP1L1Q8N3D4 1523 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
SKA2-207ENST00000583380 HTATSF1O43719 755 aaKnown RBP11.49□□□□□ -0.57
SKA2-207ENST00000583380 NOLC1Q14978 699 aaKnown RBP eCLIP11.49□□□□□ -0.57
SKA2-207ENST00000583380 TERF2Q15554 542 aa11.49□□□□□ -0.57
SKA2-207ENST00000583380 GRIPAP1Q4V328 841 aa11.49□□□□□ -0.57
SKA2-207ENST00000583380 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
SKA2-207ENST00000583380 TRMT2AQ8IZ69 625 aaKnown RBP11.49□□□□□ -0.57
SKA2-207ENST00000583380 PLCD3Q8N3E9 789 aa11.49□□□□□ -0.57
SKA2-207ENST00000583380 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.49□□□□□ -0.57
SKA2-207ENST00000583380 DDX41Q9UJV9 622 aaKnown RBP11.49□□□□□ -0.57
SKA2-207ENST00000583380 PSEN1P49768 467 aa11.48□□□□□ -0.57
SKA2-207ENST00000583380 GPS2Q13227 327 aa11.48□□□□□ -0.57
SKA2-207ENST00000583380 TACO1Q9BSH4 297 aaKnown RBP11.48□□□□□ -0.57
SKA2-207ENST00000583380 V9GYY5 206 aaPredicted RBP11.48□□□□□ -0.57
SKA2-207ENST00000583380 SCAF11Q99590 1463 aaKnown RBP11.48□□□□□ -0.57
SKA2-207ENST00000583380 PCF11O94913 1555 aaKnown RBP11.48□□□□□ -0.57
SKA2-207ENST00000583380 REREQ9P2R6 1566 aa11.48□□□□□ -0.57
SKA2-207ENST00000583380 PLIN1O60240 522 aa11.47□□□□□ -0.57
SKA2-207ENST00000583380 REC8O95072 547 aa11.47□□□□□ -0.57
SKA2-207ENST00000583380 ZSCAN23Q3MJ62 389 aa11.47□□□□□ -0.57
SKA2-207ENST00000583380 SLFNL1Q499Z3 407 aa11.47□□□□□ -0.57
SKA2-207ENST00000583380 MUM1L1Q5H9M0 696 aa11.47□□□□□ -0.57
SKA2-207ENST00000583380 TXLNBQ8N3L3 684 aa11.47□□□□□ -0.57
SKA2-207ENST00000583380 NCAPGQ9BPX3 1015 aa11.47□□□□□ -0.57
SKA2-207ENST00000583380 ZNF521Q96K83 1311 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 VGLL3A8MV65 326 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 SLFN14P0C7P3 912 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 LMOD3Q0VAK6 560 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 NBPF20Q3BBV1 942 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 HSP90AB3PQ58FF7 597 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 ZNF710Q8N1W2 664 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 RASSF4Q9H2L5 321 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 BCL2L12Q9HB09 334 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 USP25Q9UHP3 1055 aa11.46□□□□□ -0.57
SKA2-207ENST00000583380 K7ELQ4 463 aaPredicted RBP11.45□□□□□ -0.58
SKA2-207ENST00000583380 BAG4O95429 457 aaKnown RBP11.45□□□□□ -0.58
SKA2-207ENST00000583380 SLFN5Q08AF3 891 aa11.45□□□□□ -0.58
SKA2-207ENST00000583380 RABEP1Q15276 862 aa11.45□□□□□ -0.58
SKA2-207ENST00000583380 ATP2B3Q16720 1220 aa11.45□□□□□ -0.58
SKA2-207ENST00000583380 SMC4Q9NTJ3 1288 aa11.45□□□□□ -0.58
SKA2-207ENST00000583380 PRDM2Q13029 1718 aa11.45□□□□□ -0.58
SKA2-207ENST00000583380 TUBB4AP04350 444 aa11.44□□□□□ -0.58
SKA2-207ENST00000583380 CT47B1P0C2W7 299 aaPredicted RBP11.44□□□□□ -0.58
SKA2-207ENST00000583380 GTF2A1P52655 376 aaPredicted RBP11.44□□□□□ -0.58
SKA2-207ENST00000583380 TRDNQ13061 729 aa11.44□□□□□ -0.58
SKA2-207ENST00000583380 WDR43Q15061 677 aaKnown RBP eCLIP11.44□□□□□ -0.58
SKA2-207ENST00000583380 NBPF8Q3BBV2 869 aa11.44□□□□□ -0.58
SKA2-207ENST00000583380 KNSTRNQ9Y448 316 aa11.44□□□□□ -0.58
SKA2-207ENST00000583380 CDCA7LQ96GN5 454 aa11.43□□□□□ -0.58
SKA2-207ENST00000583380 SMTNL1A8MU46 457 aa11.42□□□□□ -0.58
SKA2-207ENST00000583380 ATP8B1O43520 1251 aa11.42□□□□□ -0.58
SKA2-207ENST00000583380 ICE2Q659A1 982 aa11.42□□□□□ -0.58
SKA2-207ENST00000583380 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
SKA2-207ENST00000583380 TSPY26PQ9H489 355 aa11.42□□□□□ -0.58
SKA2-207ENST00000583380 CTNNA3Q9UI47 895 aa11.42□□□□□ -0.58
SKA2-207ENST00000583380 SNAPC4Q5SXM2 1469 aa11.42□□□□□ -0.58
SKA2-207ENST00000583380 PTPRKQ15262 1439 aa11.42□□□□□ -0.58
SKA2-207ENST00000583380 ARHGEF11O15085 1522 aa11.41□□□□□ -0.58
SKA2-207ENST00000583380 BCORL1Q5H9F3 1711 aa11.41□□□□□ -0.58
SKA2-207ENST00000583380 DENND4BO75064 1496 aaPredicted RBP11.41□□□□□ -0.58
SKA2-207ENST00000583380 TRIM6-TRIM34B2RNG4 842 aa11.41□□□□□ -0.58
SKA2-207ENST00000583380 KIF2AO00139 706 aaPredicted RBP11.41□□□□□ -0.58
SKA2-207ENST00000583380 SEC24BO95487 1268 aa11.41□□□□□ -0.58
SKA2-207ENST00000583380 BRPF1P55201 1214 aaPredicted RBP11.41□□□□□ -0.58
SKA2-207ENST00000583380 TPM4P67936 248 aa11.41□□□□□ -0.58
SKA2-207ENST00000583380 DHX8Q14562 1220 aaKnown RBP11.41□□□□□ -0.58
SKA2-207ENST00000583380 CCDC91Q7Z6B0 441 aa11.41□□□□□ -0.58
SKA2-207ENST00000583380 ZNF397Q8NF99 534 aaPredicted RBP11.41□□□□□ -0.58
SKA2-207ENST00000583380 TRIM34Q9BYJ4 488 aa11.41□□□□□ -0.58
SKA2-207ENST00000583380 CEP83Q9Y592 693 aa11.41□□□□□ -0.58
SKA2-207ENST00000583380 ABCC2Q92887 1545 aa11.4□□□□□ -0.58
SKA2-207ENST00000583380 SATB1Q01826 763 aa11.4□□□□□ -0.58
SKA2-207ENST00000583380 BMS1Q14692 1282 aaKnown RBP11.4□□□□□ -0.58
SKA2-207ENST00000583380 C20orf194Q5TEA3 1177 aa11.4□□□□□ -0.58
SKA2-207ENST00000583380 SAMD1Q6SPF0 538 aaPredicted RBP11.4□□□□□ -0.58
SKA2-207ENST00000583380 RBSNQ9H1K0 784 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms