RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 POGKQ9P215 609 aa19.92■□□□□ 0.78
GGA3-216ENST00000583282 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
GGA3-216ENST00000583282 FMN2Q9NZ56 1722 aa19.89■□□□□ 0.77
GGA3-216ENST00000583282 NCOA3Q9Y6Q9 1424 aa19.89■□□□□ 0.77
GGA3-216ENST00000583282 USP47Q96K76 1375 aa19.88■□□□□ 0.77
GGA3-216ENST00000583282 MINK1Q8N4C8 1332 aaPredicted RBP19.88■□□□□ 0.77
GGA3-216ENST00000583282 CENPJQ9HC77 1338 aaPredicted RBP19.87■□□□□ 0.77
GGA3-216ENST00000583282 DCCP43146 1447 aa19.86■□□□□ 0.77
GGA3-216ENST00000583282 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
GGA3-216ENST00000583282 SIRT1Q96EB6 747 aa19.84■□□□□ 0.77
GGA3-216ENST00000583282 TULP4Q9NRJ4 1543 aa19.84■□□□□ 0.77
GGA3-216ENST00000583282 UBAP1LF5GYI3 381 aa19.82■□□□□ 0.76
GGA3-216ENST00000583282 ATF3P18847 181 aa19.81■□□□□ 0.76
GGA3-216ENST00000583282 C19orf44Q9H6X5 657 aa19.81■□□□□ 0.76
GGA3-216ENST00000583282 MST1RQ04912 1400 aa19.81■□□□□ 0.76
GGA3-216ENST00000583282 ROBO1Q9Y6N7 1651 aa19.81■□□□□ 0.76
GGA3-216ENST00000583282 RGPD8O14715 1765 aaPredicted RBP19.8■□□□□ 0.76
GGA3-216ENST00000583282 USP32Q8NFA0 1604 aa19.8■□□□□ 0.76
GGA3-216ENST00000583282 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
GGA3-216ENST00000583282 NUTM2FA1L443 756 aa19.79■□□□□ 0.76
GGA3-216ENST00000583282 CADPS2Q86UW7 1296 aa19.78■□□□□ 0.76
GGA3-216ENST00000583282 ITSN1Q15811 1721 aa19.78■□□□□ 0.76
GGA3-216ENST00000583282 PIP4K2BP78356 416 aa19.77■□□□□ 0.76
GGA3-216ENST00000583282 TOPAZ1Q8N9V7 1692 aa19.77■□□□□ 0.76
GGA3-216ENST00000583282 ST20-MTHFSA0A0A6YYL1 179 aa19.76■□□□□ 0.75
GGA3-216ENST00000583282 TOM1O60784 492 aa19.76■□□□□ 0.75
GGA3-216ENST00000583282 ATP7BP35670 1465 aa19.75■□□□□ 0.75
GGA3-216ENST00000583282 C1orf167Q5SNV9 1468 aa19.75■□□□□ 0.75
GGA3-216ENST00000583282 SBNO2Q9Y2G9 1366 aa19.74■□□□□ 0.75
GGA3-216ENST00000583282 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
GGA3-216ENST00000583282 KIF1AQ12756 1690 aa19.74■□□□□ 0.75
GGA3-216ENST00000583282 WASLO00401 505 aaPredicted RBP19.73■□□□□ 0.75
GGA3-216ENST00000583282 HSPA5P11021 654 aaKnown RBP19.73■□□□□ 0.75
GGA3-216ENST00000583282 EIF4G2P78344 907 aaKnown RBP eCLIP19.73■□□□□ 0.75
GGA3-216ENST00000583282 ANKARQ7Z5J8 1434 aa19.72■□□□□ 0.75
GGA3-216ENST00000583282 SRPK2P78362 688 aaKnown RBP19.71■□□□□ 0.75
GGA3-216ENST00000583282 EVC2Q86UK5 1308 aa19.71■□□□□ 0.75
GGA3-216ENST00000583282 DISP3Q9P2K9 1392 aa19.7■□□□□ 0.74
GGA3-216ENST00000583282 NHSL1Q5SYE7 1610 aa19.7■□□□□ 0.74
GGA3-216ENST00000583282 CDK19Q9BWU1 502 aa19.7■□□□□ 0.74
GGA3-216ENST00000583282 SLAIN2Q9P270 581 aa19.7■□□□□ 0.74
GGA3-216ENST00000583282 PRR36Q9H6K5 1346 aa19.7■□□□□ 0.74
GGA3-216ENST00000583282 TESK2Q96S53 571 aa19.69■□□□□ 0.74
GGA3-216ENST00000583282 CABP2Q9NPB3 220 aa19.69■□□□□ 0.74
GGA3-216ENST00000583282 PHLPP1O60346 1717 aa19.68■□□□□ 0.74
GGA3-216ENST00000583282 AHDC1Q5TGY3 1603 aaPredicted RBP19.66■□□□□ 0.74
GGA3-216ENST00000583282 ESCO1Q5FWF5 840 aa19.66■□□□□ 0.74
GGA3-216ENST00000583282 BRINP3Q76B58 766 aa19.66■□□□□ 0.74
GGA3-216ENST00000583282 FBXO41Q8TF61 875 aa19.66■□□□□ 0.74
GGA3-216ENST00000583282 ORAI2Q96SN7 254 aa19.66■□□□□ 0.74
GGA3-216ENST00000583282 MYOM1P52179 1685 aa19.65■□□□□ 0.74
GGA3-216ENST00000583282 PPIP5K1Q6PFW1 1433 aa19.65■□□□□ 0.74
GGA3-216ENST00000583282 NUDT16Q96DE0 195 aaKnown RBP19.64■□□□□ 0.73
GGA3-216ENST00000583282 ATAD2Q6PL18 1390 aa19.63■□□□□ 0.73
GGA3-216ENST00000583282 TMF1P82094 1093 aa19.63■□□□□ 0.73
GGA3-216ENST00000583282 COL16A1Q07092 1604 aaPredicted RBP19.62■□□□□ 0.73
GGA3-216ENST00000583282 DDX17Q92841 729 aaKnown RBP19.62■□□□□ 0.73
GGA3-216ENST00000583282 PMFBP1Q8TBY8 1022 aa19.61■□□□□ 0.73
GGA3-216ENST00000583282 POLR3GLQ9BT43 218 aa19.61■□□□□ 0.73
GGA3-216ENST00000583282 AKAP12Q02952 1782 aa19.61■□□□□ 0.73
GGA3-216ENST00000583282 PHF8Q9UPP1 1060 aa19.6■□□□□ 0.73
GGA3-216ENST00000583282 XPCQ01831 940 aaPredicted RBP19.58■□□□□ 0.72
GGA3-216ENST00000583282 PXDNQ92626 1479 aa19.58■□□□□ 0.72
GGA3-216ENST00000583282 MON2Q7Z3U7 1717 aa19.57■□□□□ 0.72
GGA3-216ENST00000583282 TRPM3Q9HCF6 1732 aaPredicted RBP19.57■□□□□ 0.72
GGA3-216ENST00000583282 FOXO3O43524 673 aa19.56■□□□□ 0.72
GGA3-216ENST00000583282 TMC1Q8TDI8 760 aa19.56■□□□□ 0.72
GGA3-216ENST00000583282 CCDC61Q9Y6R9 512 aa19.56■□□□□ 0.72
GGA3-216ENST00000583282 NRKQ7Z2Y5 1582 aa19.56■□□□□ 0.72
GGA3-216ENST00000583282 NPHP3Q7Z494 1330 aa19.55■□□□□ 0.72
GGA3-216ENST00000583282 HSPA1LP34931 641 aa19.55■□□□□ 0.72
GGA3-216ENST00000583282 NGDNQ8NEJ9 315 aaKnown RBP19.55■□□□□ 0.72
GGA3-216ENST00000583282 SLC24A1O60721 1099 aa19.54■□□□□ 0.72
GGA3-216ENST00000583282 CABP1Q9NZU7 370 aa19.54■□□□□ 0.72
GGA3-216ENST00000583282 CDCA8Q53HL2 280 aa19.53■□□□□ 0.72
GGA3-216ENST00000583282 POLR3AO14802 1390 aaPredicted RBP19.53■□□□□ 0.72
GGA3-216ENST00000583282 ACEP12821 1306 aa19.52■□□□□ 0.72
GGA3-216ENST00000583282 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.72
GGA3-216ENST00000583282 C11orf95C9JLR9 678 aaPredicted RBP19.51■□□□□ 0.71
GGA3-216ENST00000583282 ILDR1Q86SU0 546 aaPredicted RBP19.51■□□□□ 0.71
GGA3-216ENST00000583282 NINLQ9Y2I6 1382 aa19.51■□□□□ 0.71
GGA3-216ENST00000583282 SHPRHQ149N8 1683 aa19.51■□□□□ 0.71
GGA3-216ENST00000583282 ALS2Q96Q42 1657 aa19.51■□□□□ 0.71
GGA3-216ENST00000583282 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
GGA3-216ENST00000583282 A0A1W2PP64 1363 aa19.5■□□□□ 0.71
GGA3-216ENST00000583282 USP6P35125 1406 aa19.5■□□□□ 0.71
GGA3-216ENST00000583282 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
GGA3-216ENST00000583282 PLEKHG3A1L390 1219 aa19.49■□□□□ 0.71
GGA3-216ENST00000583282 SLC12A5Q9H2X9 1139 aa19.49■□□□□ 0.71
GGA3-216ENST00000583282 SOS2Q07890 1332 aaPredicted RBP19.49■□□□□ 0.71
GGA3-216ENST00000583282 CCDC7Q96M83 1385 aa19.48■□□□□ 0.71
GGA3-216ENST00000583282 PSME1Q06323 249 aa19.48■□□□□ 0.71
GGA3-216ENST00000583282 KRT28Q7Z3Y7 464 aa19.48■□□□□ 0.71
GGA3-216ENST00000583282 PUS7Q96PZ0 661 aaKnown RBP19.48■□□□□ 0.71
GGA3-216ENST00000583282 ABCA3Q99758 1704 aa19.48■□□□□ 0.71
GGA3-216ENST00000583282 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
GGA3-216ENST00000583282 PIK3C2AO00443 1686 aa19.47■□□□□ 0.71
GGA3-216ENST00000583282 CPSF1Q10570 1443 aaKnown RBP19.47■□□□□ 0.71
GGA3-216ENST00000583282 ANKRD36BQ8N2N9 1353 aa19.46■□□□□ 0.71
GGA3-216ENST00000583282 WASHC2AQ641Q2 1341 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms