RNA–Protein interactions for RNA: ENST00000582681.1

NUP85-218, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-218ENST00000582681 TONSLQ96HA7 1378 aa11.24□□□□□ -0.61
NUP85-218ENST00000582681 RBM33Q96EV2 1170 aaKnown RBP11.23□□□□□ -0.61
NUP85-218ENST00000582681 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
NUP85-218ENST00000582681 NHSL1Q5SYE7 1610 aa11.23□□□□□ -0.61
NUP85-218ENST00000582681 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
NUP85-218ENST00000582681 NBPF8Q3BBV2 869 aa11.22□□□□□ -0.61
NUP85-218ENST00000582681 C1orf167Q5SNV9 1468 aa11.22□□□□□ -0.61
NUP85-218ENST00000582681 ANKARQ7Z5J8 1434 aa11.22□□□□□ -0.61
NUP85-218ENST00000582681 SBNO2Q9Y2G9 1366 aa11.22□□□□□ -0.61
NUP85-218ENST00000582681 COL16A1Q07092 1604 aaPredicted RBP11.21□□□□□ -0.61
NUP85-218ENST00000582681 SCAF1Q9H7N4 1312 aaKnown RBP11.21□□□□□ -0.61
NUP85-218ENST00000582681 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.61
NUP85-218ENST00000582681 WAPLQ7Z5K2 1190 aa11.21□□□□□ -0.61
NUP85-218ENST00000582681 USP32Q8NFA0 1604 aa11.2□□□□□ -0.62
NUP85-218ENST00000582681 ATF3P18847 181 aa11.2□□□□□ -0.62
NUP85-218ENST00000582681 PRAM1Q96QH2 718 aa11.2□□□□□ -0.62
NUP85-218ENST00000582681 STK26Q9P289 416 aa11.2□□□□□ -0.62
NUP85-218ENST00000582681 PIP4K2BP78356 416 aa11.19□□□□□ -0.62
NUP85-218ENST00000582681 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
NUP85-218ENST00000582681 KIF1AQ12756 1690 aa11.19□□□□□ -0.62
NUP85-218ENST00000582681 TULP4Q9NRJ4 1543 aa11.19□□□□□ -0.62
NUP85-218ENST00000582681 ROCK2O75116 1388 aaKnown RBP11.18□□□□□ -0.62
NUP85-218ENST00000582681 EIF3AQ14152 1382 aaKnown RBP11.18□□□□□ -0.62
NUP85-218ENST00000582681 QRICH2Q9H0J4 1663 aa11.18□□□□□ -0.62
NUP85-218ENST00000582681 TOPAZ1Q8N9V7 1692 aa11.17□□□□□ -0.62
NUP85-218ENST00000582681 C14orf37Q86TY3 774 aa11.17□□□□□ -0.62
NUP85-218ENST00000582681 TRAK1Q9UPV9 953 aa11.17□□□□□ -0.62
NUP85-218ENST00000582681 ATP7BP35670 1465 aa11.17□□□□□ -0.62
NUP85-218ENST00000582681 PHLPP1O60346 1717 aa11.16□□□□□ -0.62
NUP85-218ENST00000582681 HSPA1LP34931 641 aa11.16□□□□□ -0.62
NUP85-218ENST00000582681 CENPJQ9HC77 1338 aaPredicted RBP11.15□□□□□ -0.62
NUP85-218ENST00000582681 SHPRHQ149N8 1683 aa11.15□□□□□ -0.62
NUP85-218ENST00000582681 PXDNQ92626 1479 aa11.15□□□□□ -0.62
NUP85-218ENST00000582681 ITSN1Q15811 1721 aa11.15□□□□□ -0.63
NUP85-218ENST00000582681 CCER1Q8TC90 406 aaPredicted RBP11.14□□□□□ -0.63
NUP85-218ENST00000582681 POGKQ9P215 609 aa11.14□□□□□ -0.63
NUP85-218ENST00000582681 RGPD8O14715 1765 aaPredicted RBP11.13□□□□□ -0.63
NUP85-218ENST00000582681 SOS2Q07890 1332 aaPredicted RBP11.13□□□□□ -0.63
NUP85-218ENST00000582681 WASLO00401 505 aaPredicted RBP11.13□□□□□ -0.63
NUP85-218ENST00000582681 COL22A1Q8NFW1 1626 aaPredicted RBP11.13□□□□□ -0.63
NUP85-218ENST00000582681 PRR36Q9H6K5 1346 aa11.12□□□□□ -0.63
NUP85-218ENST00000582681 ORAI2Q96SN7 254 aa11.11□□□□□ -0.63
NUP85-218ENST00000582681 CARD11Q9BXL7 1154 aa11.11□□□□□ -0.63
NUP85-218ENST00000582681 POLR3AO14802 1390 aaPredicted RBP11.11□□□□□ -0.63
NUP85-218ENST00000582681 NPHP3Q7Z494 1330 aa11.1□□□□□ -0.63
NUP85-218ENST00000582681 MINK1Q8N4C8 1332 aaPredicted RBP11.1□□□□□ -0.63
NUP85-218ENST00000582681 TRPM3Q9HCF6 1732 aaPredicted RBP11.1□□□□□ -0.63
NUP85-218ENST00000582681 PUS7Q96PZ0 661 aaKnown RBP11.1□□□□□ -0.63
NUP85-218ENST00000582681 JCADQ9P266 1359 aa11.1□□□□□ -0.63
NUP85-218ENST00000582681 SAFB2Q14151 953 aaKnown RBP eCLIP11.09□□□□□ -0.63
NUP85-218ENST00000582681 TESK2Q96S53 571 aa11.09□□□□□ -0.63
NUP85-218ENST00000582681 MED1Q15648 1581 aaPredicted RBP11.08□□□□□ -0.64
NUP85-218ENST00000582681 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
NUP85-218ENST00000582681 USP47Q96K76 1375 aa11.08□□□□□ -0.64
NUP85-218ENST00000582681 PLEKHG3A1L390 1219 aa11.08□□□□□ -0.64
NUP85-218ENST00000582681 SLC24A1O60721 1099 aa11.08□□□□□ -0.64
NUP85-218ENST00000582681 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
NUP85-218ENST00000582681 SBNO1A3KN83 1393 aa11.07□□□□□ -0.64
NUP85-218ENST00000582681 BRD4O60885 1362 aaPredicted RBP11.07□□□□□ -0.64
NUP85-218ENST00000582681 ESCO1Q5FWF5 840 aa11.07□□□□□ -0.64
NUP85-218ENST00000582681 HIRIP3Q9BW71 556 aaPredicted RBP11.07□□□□□ -0.64
NUP85-218ENST00000582681 CDK19Q9BWU1 502 aa11.07□□□□□ -0.64
NUP85-218ENST00000582681 PHF8Q9UPP1 1060 aa11.07□□□□□ -0.64
NUP85-218ENST00000582681 CCDC61Q9Y6R9 512 aa11.07□□□□□ -0.64
NUP85-218ENST00000582681 SPATA31A6Q5VVP1 1343 aa11.07□□□□□ -0.64
NUP85-218ENST00000582681 EVC2Q86UK5 1308 aa11.07□□□□□ -0.64
NUP85-218ENST00000582681 LRRC59Q96AG4 307 aaKnown RBP11.06□□□□□ -0.64
NUP85-218ENST00000582681 NUDT16Q96DE0 195 aaKnown RBP11.06□□□□□ -0.64
NUP85-218ENST00000582681 ATAD2Q6PL18 1390 aa11.05□□□□□ -0.64
NUP85-218ENST00000582681 CPSF1Q10570 1443 aaKnown RBP11.05□□□□□ -0.64
NUP85-218ENST00000582681 SSH2Q76I76 1423 aa11.05□□□□□ -0.64
NUP85-218ENST00000582681 CRYBG1Q9Y4K1 1723 aa11.05□□□□□ -0.64
NUP85-218ENST00000582681 LRP6O75581 1613 aa11.05□□□□□ -0.64
NUP85-218ENST00000582681 NRKQ7Z2Y5 1582 aa11.04□□□□□ -0.64
NUP85-218ENST00000582681 TNS3Q68CZ2 1445 aa11.04□□□□□ -0.64
NUP85-218ENST00000582681 AKAP12Q02952 1782 aa11.04□□□□□ -0.64
NUP85-218ENST00000582681 FOXO3O43524 673 aa11.04□□□□□ -0.64
NUP85-218ENST00000582681 SPATA31A3Q5VYP0 1347 aa11.04□□□□□ -0.64
NUP85-218ENST00000582681 ABCA3Q99758 1704 aa11.04□□□□□ -0.64
NUP85-218ENST00000582681 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
NUP85-218ENST00000582681 PPIP5K1Q6PFW1 1433 aa11.03□□□□□ -0.64
NUP85-218ENST00000582681 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
NUP85-218ENST00000582681 CD163L1Q9NR16 1453 aa11.03□□□□□ -0.64
NUP85-218ENST00000582681 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
NUP85-218ENST00000582681 DISP3Q9P2K9 1392 aa11.03□□□□□ -0.64
NUP85-218ENST00000582681 USP54Q70EL1 1684 aa11.02□□□□□ -0.64
NUP85-218ENST00000582681 MON2Q7Z3U7 1717 aa11.02□□□□□ -0.65
NUP85-218ENST00000582681 NUTM2FA1L443 756 aa11.02□□□□□ -0.65
NUP85-218ENST00000582681 DDX17Q92841 729 aaKnown RBP11.02□□□□□ -0.65
NUP85-218ENST00000582681 USP6P35125 1406 aa11.01□□□□□ -0.65
NUP85-218ENST00000582681 PSME1Q06323 249 aa11□□□□□ -0.65
NUP85-218ENST00000582681 KRT28Q7Z3Y7 464 aa11□□□□□ -0.65
NUP85-218ENST00000582681 MYOM1P52179 1685 aa11□□□□□ -0.65
NUP85-218ENST00000582681 ACEP12821 1306 aa11□□□□□ -0.65
NUP85-218ENST00000582681 MARF1Q9Y4F3 1742 aaKnown RBP11□□□□□ -0.65
NUP85-218ENST00000582681 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
NUP85-218ENST00000582681 CABP2Q9NPB3 220 aa10.99□□□□□ -0.65
NUP85-218ENST00000582681 PMFBP1Q8TBY8 1022 aa10.98□□□□□ -0.65
NUP85-218ENST00000582681 PIK3C2AO00443 1686 aa10.98□□□□□ -0.65
NUP85-218ENST00000582681 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms