RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 EIF3AQ14152 1382 aaKnown RBP12.73□□□□□ -0.37
SS18-220ENST00000582092 ROBO1Q9Y6N7 1651 aa12.73□□□□□ -0.37
SS18-220ENST00000582092 PTPRUQ92729 1446 aa12.72□□□□□ -0.37
SS18-220ENST00000582092 METP08581 1390 aa12.72□□□□□ -0.37
SS18-220ENST00000582092 GPRASP1Q5JY77 1395 aa12.71□□□□□ -0.37
SS18-220ENST00000582092 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.38
SS18-220ENST00000582092 DCCP43146 1447 aa12.71□□□□□ -0.38
SS18-220ENST00000582092 LAMC1P11047 1609 aa12.69□□□□□ -0.38
SS18-220ENST00000582092 PHLPP1O60346 1717 aa12.68□□□□□ -0.38
SS18-220ENST00000582092 ADGRF5Q8IZF2 1346 aa12.68□□□□□ -0.38
SS18-220ENST00000582092 MYOM2P54296 1465 aa12.68□□□□□ -0.38
SS18-220ENST00000582092 CFAP70Q5T0N1 1121 aa12.68□□□□□ -0.38
SS18-220ENST00000582092 PTCH1Q13635 1447 aa12.68□□□□□ -0.38
SS18-220ENST00000582092 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
SS18-220ENST00000582092 ADGRL3Q9HAR2 1447 aa12.67□□□□□ -0.38
SS18-220ENST00000582092 CNGB1Q14028 1251 aaPredicted RBP12.66□□□□□ -0.38
SS18-220ENST00000582092 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
SS18-220ENST00000582092 PIK3C2GO75747 1445 aa12.65□□□□□ -0.38
SS18-220ENST00000582092 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
SS18-220ENST00000582092 PRKRIP1Q9H875 184 aaPredicted RBP12.64□□□□□ -0.39
SS18-220ENST00000582092 STK26Q9P289 416 aa12.64□□□□□ -0.39
SS18-220ENST00000582092 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
SS18-220ENST00000582092 KIAA1210Q9ULL0 1709 aa12.64□□□□□ -0.39
SS18-220ENST00000582092 C14orf93Q9H972 538 aaKnown RBP12.63□□□□□ -0.39
SS18-220ENST00000582092 LRPPRCP42704 1394 aaKnown RBP12.63□□□□□ -0.39
SS18-220ENST00000582092 ABCC11Q96J66 1382 aa12.62□□□□□ -0.39
SS18-220ENST00000582092 ROBO2Q9HCK4 1378 aa12.62□□□□□ -0.39
SS18-220ENST00000582092 MRS2Q9HD23 443 aa12.62□□□□□ -0.39
SS18-220ENST00000582092 NRXN1Q9ULB1 1477 aa12.61□□□□□ -0.39
SS18-220ENST00000582092 JCADQ9P266 1359 aa12.61□□□□□ -0.39
SS18-220ENST00000582092 RALBP1Q15311 655 aa12.61□□□□□ -0.39
SS18-220ENST00000582092 TMEM132EQ6IEE7 984 aa12.61□□□□□ -0.39
SS18-220ENST00000582092 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
SS18-220ENST00000582092 TESK2Q96S53 571 aa12.61□□□□□ -0.39
SS18-220ENST00000582092 AHDC1Q5TGY3 1603 aaPredicted RBP12.61□□□□□ -0.39
SS18-220ENST00000582092 TECPR2O15040 1411 aa12.61□□□□□ -0.39
SS18-220ENST00000582092 MST1RQ04912 1400 aa12.61□□□□□ -0.39
SS18-220ENST00000582092 YTHDC2Q9H6S0 1430 aaKnown RBP12.61□□□□□ -0.39
SS18-220ENST00000582092 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
SS18-220ENST00000582092 TRAK1Q9UPV9 953 aa12.6□□□□□ -0.39
SS18-220ENST00000582092 CENPJQ9HC77 1338 aaPredicted RBP12.6□□□□□ -0.39
SS18-220ENST00000582092 KTN1Q86UP2 1357 aaKnown RBP12.59□□□□□ -0.39
SS18-220ENST00000582092 TMC1Q8TDI8 760 aa12.59□□□□□ -0.39
SS18-220ENST00000582092 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
SS18-220ENST00000582092 COL16A1Q07092 1604 aaPredicted RBP12.59□□□□□ -0.39
SS18-220ENST00000582092 ASXL1Q8IXJ9 1541 aa12.58□□□□□ -0.4
SS18-220ENST00000582092 LRRC59Q96AG4 307 aaKnown RBP12.58□□□□□ -0.4
SS18-220ENST00000582092 PANK3Q9H999 370 aa12.58□□□□□ -0.4
SS18-220ENST00000582092 POGKQ9P215 609 aa12.58□□□□□ -0.4
SS18-220ENST00000582092 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
SS18-220ENST00000582092 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
SS18-220ENST00000582092 CDC42BPGQ6DT37 1551 aa12.57□□□□□ -0.4
SS18-220ENST00000582092 FAM9BQ8IZU0 186 aa12.57□□□□□ -0.4
SS18-220ENST00000582092 C1orf167Q5SNV9 1468 aa12.57□□□□□ -0.4
SS18-220ENST00000582092 WAPLQ7Z5K2 1190 aa12.56□□□□□ -0.4
SS18-220ENST00000582092 SHPRHQ149N8 1683 aa12.56□□□□□ -0.4
SS18-220ENST00000582092 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
SS18-220ENST00000582092 MEX3CQ5U5Q3 659 aaKnown RBP12.55□□□□□ -0.4
SS18-220ENST00000582092 DLC1Q96QB1 1528 aa12.54□□□□□ -0.4
SS18-220ENST00000582092 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.4
SS18-220ENST00000582092 NPHP3Q7Z494 1330 aa12.54□□□□□ -0.4
SS18-220ENST00000582092 EVC2Q86UK5 1308 aa12.54□□□□□ -0.4
SS18-220ENST00000582092 PRAM1Q96QH2 718 aa12.53□□□□□ -0.4
SS18-220ENST00000582092 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
SS18-220ENST00000582092 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
SS18-220ENST00000582092 FMN2Q9NZ56 1722 aa12.53□□□□□ -0.4
SS18-220ENST00000582092 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.41
SS18-220ENST00000582092 ILDR2Q71H61 639 aa12.52□□□□□ -0.41
SS18-220ENST00000582092 ORAI2Q96SN7 254 aa12.52□□□□□ -0.41
SS18-220ENST00000582092 KIF1AQ12756 1690 aa12.51□□□□□ -0.41
SS18-220ENST00000582092 SAFB2Q14151 953 aaKnown RBP eCLIP12.51□□□□□ -0.41
SS18-220ENST00000582092 PLEKHH1Q9ULM0 1364 aa12.51□□□□□ -0.41
SS18-220ENST00000582092 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
SS18-220ENST00000582092 RGPD8O14715 1765 aaPredicted RBP12.51□□□□□ -0.41
SS18-220ENST00000582092 NUTM2FA1L443 756 aa12.5□□□□□ -0.41
SS18-220ENST00000582092 SBNO2Q9Y2G9 1366 aa12.5□□□□□ -0.41
SS18-220ENST00000582092 BRD4O60885 1362 aaPredicted RBP12.49□□□□□ -0.41
SS18-220ENST00000582092 SOS2Q07890 1332 aaPredicted RBP12.49□□□□□ -0.41
SS18-220ENST00000582092 NUTM2BA6NNL0 878 aaPredicted RBP12.49□□□□□ -0.41
SS18-220ENST00000582092 NUTM2EB1AL46 878 aaPredicted RBP12.49□□□□□ -0.41
SS18-220ENST00000582092 SOCS7O14512 581 aa12.49□□□□□ -0.41
SS18-220ENST00000582092 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
SS18-220ENST00000582092 NUTM2AQ8IVF1 878 aaPredicted RBP12.49□□□□□ -0.41
SS18-220ENST00000582092 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
SS18-220ENST00000582092 PSME1Q06323 249 aa12.48□□□□□ -0.41
SS18-220ENST00000582092 ZNF772Q68DY9 489 aaPredicted RBP12.48□□□□□ -0.41
SS18-220ENST00000582092 PUS7Q96PZ0 661 aaKnown RBP12.48□□□□□ -0.41
SS18-220ENST00000582092 ARHGEF28Q8N1W1 1705 aaKnown RBP12.48□□□□□ -0.41
SS18-220ENST00000582092 PER1O15534 1290 aaPredicted RBP12.47□□□□□ -0.41
SS18-220ENST00000582092 FOXO3O43524 673 aa12.47□□□□□ -0.41
SS18-220ENST00000582092 DDX17Q92841 729 aaKnown RBP12.47□□□□□ -0.41
SS18-220ENST00000582092 ADGRB2O60241 1585 aa12.47□□□□□ -0.41
SS18-220ENST00000582092 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.41
SS18-220ENST00000582092 PNPLA6Q8IY17 1366 aa12.46□□□□□ -0.41
SS18-220ENST00000582092 MINK1Q8N4C8 1332 aaPredicted RBP12.46□□□□□ -0.41
SS18-220ENST00000582092 NEFLP07196 543 aa12.46□□□□□ -0.41
SS18-220ENST00000582092 CCDC184Q52MB2 194 aa12.46□□□□□ -0.41
SS18-220ENST00000582092 PHF8Q9UPP1 1060 aa12.46□□□□□ -0.41
SS18-220ENST00000582092 ITSN1Q15811 1721 aa12.45□□□□□ -0.42
SS18-220ENST00000582092 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms