RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.8□□□□□ -0.68
TVP23B-209ENST00000581733 CTC1Q2NKJ3 1217 aa10.79□□□□□ -0.68
TVP23B-209ENST00000581733 INSM1Q01101 510 aaPredicted RBP10.78□□□□□ -0.68
TVP23B-209ENST00000581733 TTC24A2A3L6 582 aaPredicted RBP10.77□□□□□ -0.69
TVP23B-209ENST00000581733 WIPF1O43516 503 aa10.76□□□□□ -0.69
TVP23B-209ENST00000581733 RSPH4AQ5TD94 716 aa10.76□□□□□ -0.69
TVP23B-209ENST00000581733 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
TVP23B-209ENST00000581733 PXYLP1Q8TE99 480 aa10.75□□□□□ -0.69
TVP23B-209ENST00000581733 ARHGEF1Q92888 912 aaKnown RBP10.75□□□□□ -0.69
TVP23B-209ENST00000581733 FCHSD2O94868 740 aa10.73□□□□□ -0.69
TVP23B-209ENST00000581733 SNRPBP14678 240 aaKnown RBP10.73□□□□□ -0.69
TVP23B-209ENST00000581733 FAM160A2Q8N612 972 aaPredicted RBP10.72□□□□□ -0.69
TVP23B-209ENST00000581733 RDH13Q8NBN7 331 aa10.72□□□□□ -0.69
TVP23B-209ENST00000581733 PRDM9Q9NQV7 894 aa10.72□□□□□ -0.69
TVP23B-209ENST00000581733 OATP04181 439 aa10.71□□□□□ -0.69
TVP23B-209ENST00000581733 MORN1Q5T089 497 aa10.71□□□□□ -0.69
TVP23B-209ENST00000581733 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
TVP23B-209ENST00000581733 THAP11Q96EK4 314 aa10.71□□□□□ -0.69
TVP23B-209ENST00000581733 ATP13A2Q9NQ11 1180 aa10.71□□□□□ -0.69
TVP23B-209ENST00000581733 ZBTB24O43167 697 aaPredicted RBP10.7□□□□□ -0.7
TVP23B-209ENST00000581733 FUT2Q10981 343 aa10.7□□□□□ -0.7
TVP23B-209ENST00000581733 KCNV2Q8TDN2 545 aa10.7□□□□□ -0.7
TVP23B-209ENST00000581733 TERTO14746 1132 aaKnown RBP10.69□□□□□ -0.7
TVP23B-209ENST00000581733 FMNL1O95466 1100 aaPredicted RBP10.69□□□□□ -0.7
TVP23B-209ENST00000581733 SMPD1P17405 629 aa10.68□□□□□ -0.7
TVP23B-209ENST00000581733 METTL3Q86U44 580 aaKnown RBP10.68□□□□□ -0.7
TVP23B-209ENST00000581733 SLC27A5Q9Y2P5 690 aa10.68□□□□□ -0.7
TVP23B-209ENST00000581733 ABCC8Q09428 1581 aa10.68□□□□□ -0.7
TVP23B-209ENST00000581733 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
TVP23B-209ENST00000581733 SNIP1Q8TAD8 396 aaKnown RBP10.66□□□□□ -0.7
TVP23B-209ENST00000581733 DDX11L8A8MPP1 907 aa10.65□□□□□ -0.7
TVP23B-209ENST00000581733 TRIM47Q96LD4 638 aa10.65□□□□□ -0.7
TVP23B-209ENST00000581733 CFTRP13569 1480 aa10.64□□□□□ -0.71
TVP23B-209ENST00000581733 J3QL48 77 aa10.64□□□□□ -0.71
TVP23B-209ENST00000581733 WNT7AO00755 349 aa10.64□□□□□ -0.71
TVP23B-209ENST00000581733 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
TVP23B-209ENST00000581733 SENP2Q9HC62 589 aa10.64□□□□□ -0.71
TVP23B-209ENST00000581733 BIVM-ERCC5R4GMW8 1640 aa10.64□□□□□ -0.71
TVP23B-209ENST00000581733 NLRP7Q8WX94 980 aa10.63□□□□□ -0.71
TVP23B-209ENST00000581733 FECHP22830 423 aa10.62□□□□□ -0.71
TVP23B-209ENST00000581733 BRICD5Q6PL45 260 aa10.62□□□□□ -0.71
TVP23B-209ENST00000581733 MRGPRX2Q96LB1 330 aa10.62□□□□□ -0.71
TVP23B-209ENST00000581733 LAMC3Q9Y6N6 1575 aa10.61□□□□□ -0.71
TVP23B-209ENST00000581733 TRIM32Q13049 653 aa10.61□□□□□ -0.71
TVP23B-209ENST00000581733 RNF19BQ6ZMZ0 732 aa10.61□□□□□ -0.71
TVP23B-209ENST00000581733 DAXXQ9UER7 740 aaPredicted RBP10.61□□□□□ -0.71
TVP23B-209ENST00000581733 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
TVP23B-209ENST00000581733 TOP2BQ02880 1626 aa10.6□□□□□ -0.71
TVP23B-209ENST00000581733 HPS1Q92902 700 aa10.6□□□□□ -0.71
TVP23B-209ENST00000581733 SYNJ1O43426 1573 aa10.6□□□□□ -0.71
TVP23B-209ENST00000581733 GCGRP47871 477 aa10.58□□□□□ -0.72
TVP23B-209ENST00000581733 HIC1Q14526 733 aa10.58□□□□□ -0.72
TVP23B-209ENST00000581733 MSS51Q4VC12 460 aa10.58□□□□□ -0.72
TVP23B-209ENST00000581733 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-209ENST00000581733 SEMA3EO15041 775 aa10.57□□□□□ -0.72
TVP23B-209ENST00000581733 KIFC2Q96AC6 838 aa10.57□□□□□ -0.72
TVP23B-209ENST00000581733 CADPSQ9ULU8 1353 aa10.56□□□□□ -0.72
TVP23B-209ENST00000581733 FAM181BA6NEQ2 426 aa10.54□□□□□ -0.72
TVP23B-209ENST00000581733 SLC16A10Q8TF71 515 aa10.54□□□□□ -0.72
TVP23B-209ENST00000581733 EEA1Q15075 1411 aa10.53□□□□□ -0.72
TVP23B-209ENST00000581733 SULF1Q8IWU6 871 aa10.53□□□□□ -0.72
TVP23B-209ENST00000581733 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
TVP23B-209ENST00000581733 KIF21AQ7Z4S6 1674 aa10.51□□□□□ -0.73
TVP23B-209ENST00000581733 GMPRP36959 345 aa10.51□□□□□ -0.73
TVP23B-209ENST00000581733 RBM26Q5T8P6 1007 aaKnown RBP10.51□□□□□ -0.73
TVP23B-209ENST00000581733 CUX1P39880 1505 aa10.5□□□□□ -0.73
TVP23B-209ENST00000581733 GNPATO15228 680 aa10.5□□□□□ -0.73
TVP23B-209ENST00000581733 MMP16P51512 607 aa10.5□□□□□ -0.73
TVP23B-209ENST00000581733 GRIPAP1Q4V328 841 aa10.5□□□□□ -0.73
TVP23B-209ENST00000581733 RC3H1Q5TC82 1133 aaKnown RBP10.5□□□□□ -0.73
TVP23B-209ENST00000581733 CCDC24Q8N4L8 307 aa10.5□□□□□ -0.73
TVP23B-209ENST00000581733 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
TVP23B-209ENST00000581733 ZSCAN1Q8NBB4 408 aa10.49□□□□□ -0.73
TVP23B-209ENST00000581733 NXF1Q9UBU9 619 aaKnown RBP10.49□□□□□ -0.73
TVP23B-209ENST00000581733 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
TVP23B-209ENST00000581733 ALDH1A1P00352 501 aa10.48□□□□□ -0.73
TVP23B-209ENST00000581733 VEGFBP49765 207 aa10.48□□□□□ -0.73
TVP23B-209ENST00000581733 Q3C1V9 767 aa10.48□□□□□ -0.73
TVP23B-209ENST00000581733 PHOX2BQ99453 314 aa10.48□□□□□ -0.73
TVP23B-209ENST00000581733 SKOR1P84550 965 aa10.47□□□□□ -0.73
TVP23B-209ENST00000581733 CEP164Q9UPV0 1460 aa10.47□□□□□ -0.73
TVP23B-209ENST00000581733 LOC100996750A0A140TA64 210 aa10.46□□□□□ -0.73
TVP23B-209ENST00000581733 BMP1P13497 986 aa10.46□□□□□ -0.73
TVP23B-209ENST00000581733 KRTAP4-6Q9BYQ5 205 aa10.46□□□□□ -0.73
TVP23B-209ENST00000581733 NESP48681 1621 aa10.45□□□□□ -0.74
TVP23B-209ENST00000581733 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
TVP23B-209ENST00000581733 DXOO77932 396 aaKnown RBP10.45□□□□□ -0.74
TVP23B-209ENST00000581733 PRKCSHP14314 528 aaPredicted RBP10.45□□□□□ -0.74
TVP23B-209ENST00000581733 LORP23490 312 aaPredicted RBP10.45□□□□□ -0.74
TVP23B-209ENST00000581733 TPRNQ4KMQ1 711 aa10.45□□□□□ -0.74
TVP23B-209ENST00000581733 IRF7Q92985 503 aa10.45□□□□□ -0.74
TVP23B-209ENST00000581733 USB1Q9BQ65 265 aaKnown RBP10.45□□□□□ -0.74
TVP23B-209ENST00000581733 KIF21BO75037 1637 aa10.44□□□□□ -0.74
TVP23B-209ENST00000581733 WNT7BP56706 349 aa10.42□□□□□ -0.74
TVP23B-209ENST00000581733 GPR37O15354 613 aa10.41□□□□□ -0.74
TVP23B-209ENST00000581733 TRIM46Q7Z4K8 759 aa10.41□□□□□ -0.74
TVP23B-209ENST00000581733 WDR97A6NE52 1622 aa10.4□□□□□ -0.74
TVP23B-209ENST00000581733 FAM9AQ8IZU1 332 aaPredicted RBP10.4□□□□□ -0.74
TVP23B-209ENST00000581733 SOGA1O94964 1423 aa10.4□□□□□ -0.75
TVP23B-209ENST00000581733 ERBB4Q15303 1308 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms