RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ADGRB2O60241 1585 aa21.41■■□□□ 1.02
MKS1-210ENST00000581180 SAFB2Q14151 953 aaKnown RBP eCLIP21.41■■□□□ 1.02
MKS1-210ENST00000581180 CDC42BPGQ6DT37 1551 aa21.4■■□□□ 1.02
MKS1-210ENST00000581180 DCCP43146 1447 aa21.4■■□□□ 1.02
MKS1-210ENST00000581180 EIF3AQ14152 1382 aaKnown RBP21.4■■□□□ 1.02
MKS1-210ENST00000581180 CENPJQ9HC77 1338 aaPredicted RBP21.4■■□□□ 1.02
MKS1-210ENST00000581180 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
MKS1-210ENST00000581180 USP47Q96K76 1375 aa21.38■■□□□ 1.01
MKS1-210ENST00000581180 FMN2Q9NZ56 1722 aa21.37■■□□□ 1.01
MKS1-210ENST00000581180 MINK1Q8N4C8 1332 aaPredicted RBP21.36■■□□□ 1.01
MKS1-210ENST00000581180 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
MKS1-210ENST00000581180 CADPS2Q86UW7 1296 aa21.35■■□□□ 1.01
MKS1-210ENST00000581180 SBNO2Q9Y2G9 1366 aa21.35■■□□□ 1.01
MKS1-210ENST00000581180 RGPD8O14715 1765 aaPredicted RBP21.34■■□□□ 1.01
MKS1-210ENST00000581180 ST20-MTHFSA0A0A6YYL1 179 aa21.33■■□□□ 1.01
MKS1-210ENST00000581180 ATF3P18847 181 aa21.33■■□□□ 1.01
MKS1-210ENST00000581180 HIRIP3Q9BW71 556 aaPredicted RBP21.33■■□□□ 1.01
MKS1-210ENST00000581180 MST1RQ04912 1400 aa21.32■■□□□ 1
MKS1-210ENST00000581180 TULP4Q9NRJ4 1543 aa21.31■■□□□ 1
MKS1-210ENST00000581180 UBAP1LF5GYI3 381 aa21.31■■□□□ 1
MKS1-210ENST00000581180 TOM1O60784 492 aa21.31■■□□□ 1
MKS1-210ENST00000581180 TESK2Q96S53 571 aa21.31■■□□□ 1
MKS1-210ENST00000581180 USP32Q8NFA0 1604 aa21.3■■□□□ 1
MKS1-210ENST00000581180 WASLO00401 505 aaPredicted RBP21.3■■□□□ 1
MKS1-210ENST00000581180 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
MKS1-210ENST00000581180 EIF4G2P78344 907 aaKnown RBP eCLIP21.28■■□□□ 1
MKS1-210ENST00000581180 SLAIN2Q9P270 581 aa21.28■■□□□ 1
MKS1-210ENST00000581180 HSPA5P11021 654 aaKnown RBP21.26■□□□□ 0.99
MKS1-210ENST00000581180 CDK19Q9BWU1 502 aa21.26■□□□□ 0.99
MKS1-210ENST00000581180 ROBO1Q9Y6N7 1651 aa21.25■□□□□ 0.99
MKS1-210ENST00000581180 ANKARQ7Z5J8 1434 aa21.25■□□□□ 0.99
MKS1-210ENST00000581180 ATP7BP35670 1465 aa21.24■□□□□ 0.99
MKS1-210ENST00000581180 EVC2Q86UK5 1308 aa21.24■□□□□ 0.99
MKS1-210ENST00000581180 PRR36Q9H6K5 1346 aa21.24■□□□□ 0.99
MKS1-210ENST00000581180 ITSN1Q15811 1721 aa21.24■□□□□ 0.99
MKS1-210ENST00000581180 NUTM2FA1L443 756 aa21.23■□□□□ 0.99
MKS1-210ENST00000581180 TOPAZ1Q8N9V7 1692 aa21.23■□□□□ 0.99
MKS1-210ENST00000581180 SLC24A1O60721 1099 aa21.22■□□□□ 0.99
MKS1-210ENST00000581180 PIP4K2BP78356 416 aa21.2■□□□□ 0.98
MKS1-210ENST00000581180 FBXO41Q8TF61 875 aa21.2■□□□□ 0.98
MKS1-210ENST00000581180 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
MKS1-210ENST00000581180 ORAI2Q96SN7 254 aa21.2■□□□□ 0.98
MKS1-210ENST00000581180 CABP2Q9NPB3 220 aa21.2■□□□□ 0.98
MKS1-210ENST00000581180 SRPK2P78362 688 aaKnown RBP21.19■□□□□ 0.98
MKS1-210ENST00000581180 BRINP3Q76B58 766 aa21.19■□□□□ 0.98
MKS1-210ENST00000581180 DISP3Q9P2K9 1392 aa21.19■□□□□ 0.98
MKS1-210ENST00000581180 KIF1AQ12756 1690 aa21.18■□□□□ 0.98
MKS1-210ENST00000581180 PUS7Q96PZ0 661 aaKnown RBP21.18■□□□□ 0.98
MKS1-210ENST00000581180 NHSL1Q5SYE7 1610 aa21.18■□□□□ 0.98
MKS1-210ENST00000581180 TMF1P82094 1093 aa21.17■□□□□ 0.98
MKS1-210ENST00000581180 ESCO1Q5FWF5 840 aa21.16■□□□□ 0.98
MKS1-210ENST00000581180 CCDC61Q9Y6R9 512 aa21.16■□□□□ 0.98
MKS1-210ENST00000581180 AHDC1Q5TGY3 1603 aaPredicted RBP21.15■□□□□ 0.98
MKS1-210ENST00000581180 ATAD2Q6PL18 1390 aa21.14■□□□□ 0.98
MKS1-210ENST00000581180 SCAF1Q9H7N4 1312 aaKnown RBP21.14■□□□□ 0.97
MKS1-210ENST00000581180 PHF8Q9UPP1 1060 aa21.14■□□□□ 0.97
MKS1-210ENST00000581180 PLEKHG3A1L390 1219 aa21.12■□□□□ 0.97
MKS1-210ENST00000581180 PPIP5K1Q6PFW1 1433 aa21.12■□□□□ 0.97
MKS1-210ENST00000581180 PHLPP1O60346 1717 aa21.11■□□□□ 0.97
MKS1-210ENST00000581180 C11orf95C9JLR9 678 aaPredicted RBP21.1■□□□□ 0.97
MKS1-210ENST00000581180 CDCA8Q53HL2 280 aa21.1■□□□□ 0.97
MKS1-210ENST00000581180 PMFBP1Q8TBY8 1022 aa21.1■□□□□ 0.97
MKS1-210ENST00000581180 AKAP12Q02952 1782 aa21.1■□□□□ 0.97
MKS1-210ENST00000581180 MYOM1P52179 1685 aa21.09■□□□□ 0.97
MKS1-210ENST00000581180 POLR3AO14802 1390 aaPredicted RBP21.09■□□□□ 0.97
MKS1-210ENST00000581180 COL16A1Q07092 1604 aaPredicted RBP21.08■□□□□ 0.97
MKS1-210ENST00000581180 FOXO3O43524 673 aa21.08■□□□□ 0.97
MKS1-210ENST00000581180 DDX17Q92841 729 aaKnown RBP21.08■□□□□ 0.97
MKS1-210ENST00000581180 CABP1Q9NZU7 370 aa21.08■□□□□ 0.97
MKS1-210ENST00000581180 PXDNQ92626 1479 aa21.07■□□□□ 0.96
MKS1-210ENST00000581180 SOS2Q07890 1332 aaPredicted RBP21.06■□□□□ 0.96
MKS1-210ENST00000581180 NPHP3Q7Z494 1330 aa21.06■□□□□ 0.96
MKS1-210ENST00000581180 TRPM3Q9HCF6 1732 aaPredicted RBP21.06■□□□□ 0.96
MKS1-210ENST00000581180 ACEP12821 1306 aa21.05■□□□□ 0.96
MKS1-210ENST00000581180 SLC12A5Q9H2X9 1139 aa21.05■□□□□ 0.96
MKS1-210ENST00000581180 NINLQ9Y2I6 1382 aa21.05■□□□□ 0.96
MKS1-210ENST00000581180 CD163L1Q9NR16 1453 aa21.05■□□□□ 0.96
MKS1-210ENST00000581180 MON2Q7Z3U7 1717 aa21.04■□□□□ 0.96
MKS1-210ENST00000581180 HSPA1LP34931 641 aa21.04■□□□□ 0.96
MKS1-210ENST00000581180 NGDNQ8NEJ9 315 aaKnown RBP21.04■□□□□ 0.96
MKS1-210ENST00000581180 CPSF1Q10570 1443 aaKnown RBP21.04■□□□□ 0.96
MKS1-210ENST00000581180 KIF7Q2M1P5 1343 aa21.03■□□□□ 0.96
MKS1-210ENST00000581180 TMC1Q8TDI8 760 aa21.02■□□□□ 0.96
MKS1-210ENST00000581180 XPCQ01831 940 aaPredicted RBP21.01■□□□□ 0.95
MKS1-210ENST00000581180 KRT28Q7Z3Y7 464 aa21.01■□□□□ 0.95
MKS1-210ENST00000581180 PSME1Q06323 249 aa21■□□□□ 0.95
MKS1-210ENST00000581180 ILDR1Q86SU0 546 aaPredicted RBP21■□□□□ 0.95
MKS1-210ENST00000581180 ALS2Q96Q42 1657 aa20.99■□□□□ 0.95
MKS1-210ENST00000581180 CCDC7Q96M83 1385 aa20.99■□□□□ 0.95
MKS1-210ENST00000581180 USP6P35125 1406 aa20.99■□□□□ 0.95
MKS1-210ENST00000581180 WASHC2AQ641Q2 1341 aa20.99■□□□□ 0.95
MKS1-210ENST00000581180 SBNO1A3KN83 1393 aa20.98■□□□□ 0.95
MKS1-210ENST00000581180 NRKQ7Z2Y5 1582 aa20.98■□□□□ 0.95
MKS1-210ENST00000581180 SSH2Q76I76 1423 aa20.98■□□□□ 0.95
MKS1-210ENST00000581180 ZNF692Q9BU19 519 aaPredicted RBP20.98■□□□□ 0.95
MKS1-210ENST00000581180 A0A1W2PP64 1363 aa20.97■□□□□ 0.95
MKS1-210ENST00000581180 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
MKS1-210ENST00000581180 BRD4O60885 1362 aaPredicted RBP20.97■□□□□ 0.95
MKS1-210ENST00000581180 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
MKS1-210ENST00000581180 SHPRHQ149N8 1683 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms