RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 KDM5BQ9UGL1 1544 aa9.27□□□□□ -0.93
PTPRM-213ENST00000580949 PRSS12P56730 875 aa9.27□□□□□ -0.93
PTPRM-213ENST00000580949 CFDP1Q9UEE9 299 aaPredicted RBP9.27□□□□□ -0.93
PTPRM-213ENST00000580949 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.93
PTPRM-213ENST00000580949 SETD5Q9C0A6 1442 aa9.26□□□□□ -0.93
PTPRM-213ENST00000580949 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
PTPRM-213ENST00000580949 VPS9D1Q9Y2B5 631 aa9.26□□□□□ -0.93
PTPRM-213ENST00000580949 RAB3GAP2Q9H2M9 1393 aa9.25□□□□□ -0.93
PTPRM-213ENST00000580949 ADCY10Q96PN6 1610 aa9.25□□□□□ -0.93
PTPRM-213ENST00000580949 TRIM6-TRIM34B2RNG4 842 aa9.25□□□□□ -0.93
PTPRM-213ENST00000580949 GNPATO15228 680 aa9.25□□□□□ -0.93
PTPRM-213ENST00000580949 ADGRD1Q6QNK2 874 aa9.25□□□□□ -0.93
PTPRM-213ENST00000580949 ANKRD13DQ6ZTN6 518 aa9.25□□□□□ -0.93
PTPRM-213ENST00000580949 TTC13Q8NBP0 860 aa9.25□□□□□ -0.93
PTPRM-213ENST00000580949 DHX57Q6P158 1386 aaKnown RBP9.24□□□□□ -0.93
PTPRM-213ENST00000580949 PROX2Q3B8N5 592 aa9.24□□□□□ -0.93
PTPRM-213ENST00000580949 ZC3H15Q8WU90 426 aaKnown RBP9.24□□□□□ -0.93
PTPRM-213ENST00000580949 CHIC2Q9UKJ5 165 aa9.24□□□□□ -0.93
PTPRM-213ENST00000580949 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
PTPRM-213ENST00000580949 ABCC5O15440 1437 aa9.23□□□□□ -0.93
PTPRM-213ENST00000580949 PADI6Q6TGC4 694 aa9.23□□□□□ -0.93
PTPRM-213ENST00000580949 RRP7BPQ9NSQ0 103 aa9.23□□□□□ -0.93
PTPRM-213ENST00000580949 TSKSQ9UJT2 592 aa9.23□□□□□ -0.93
PTPRM-213ENST00000580949 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
PTPRM-213ENST00000580949 NAIPQ13075 1403 aa9.22□□□□□ -0.93
PTPRM-213ENST00000580949 ZCCHC11Q5TAX3 1644 aaKnown RBP9.21□□□□□ -0.93
PTPRM-213ENST00000580949 PACS2Q86VP3 889 aa9.21□□□□□ -0.94
PTPRM-213ENST00000580949 FAM198AQ9UFP1 575 aa9.21□□□□□ -0.94
PTPRM-213ENST00000580949 HFM1A2PYH4 1435 aa9.21□□□□□ -0.94
PTPRM-213ENST00000580949 DAPK1P53355 1430 aa9.21□□□□□ -0.94
PTPRM-213ENST00000580949 CAMSAP2Q08AD1 1489 aa9.21□□□□□ -0.94
PTPRM-213ENST00000580949 HRO43593 1189 aa9.2□□□□□ -0.94
PTPRM-213ENST00000580949 ZMYND10O75800 440 aa9.2□□□□□ -0.94
PTPRM-213ENST00000580949 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
PTPRM-213ENST00000580949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPRM-213ENST00000580949 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
PTPRM-213ENST00000580949 HNRNPMP52272 730 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTPRM-213ENST00000580949 BARGINQ6ZT62 677 aa9.19□□□□□ -0.94
PTPRM-213ENST00000580949 NBPF3Q9H094 633 aa9.19□□□□□ -0.94
PTPRM-213ENST00000580949 NBPF26B4DH59 902 aa9.18□□□□□ -0.94
PTPRM-213ENST00000580949 FECHP22830 423 aa9.18□□□□□ -0.94
PTPRM-213ENST00000580949 ROCK1Q13464 1354 aa9.18□□□□□ -0.94
PTPRM-213ENST00000580949 CYB5RLQ6IPT4 315 aa9.18□□□□□ -0.94
PTPRM-213ENST00000580949 TTC37Q6PGP7 1564 aa9.18□□□□□ -0.94
PTPRM-213ENST00000580949 ASXL2Q76L83 1435 aa9.18□□□□□ -0.94
PTPRM-213ENST00000580949 AKNAQ7Z591 1439 aa9.18□□□□□ -0.94
PTPRM-213ENST00000580949 MBD5Q9P267 1494 aa9.17□□□□□ -0.94
PTPRM-213ENST00000580949 WDR7Q9Y4E6 1490 aa9.17□□□□□ -0.94
PTPRM-213ENST00000580949 MAP2K5Q13163 448 aa9.17□□□□□ -0.94
PTPRM-213ENST00000580949 CDC42BPAQ5VT25 1732 aa9.17□□□□□ -0.94
PTPRM-213ENST00000580949 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
PTPRM-213ENST00000580949 PLCH2O75038 1416 aa9.16□□□□□ -0.94
PTPRM-213ENST00000580949 MINK1Q8N4C8 1332 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-213ENST00000580949 CLSPNQ9HAW4 1339 aa9.16□□□□□ -0.94
PTPRM-213ENST00000580949 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-213ENST00000580949 TATDN2Q93075 761 aa9.16□□□□□ -0.94
PTPRM-213ENST00000580949 ADGRG1Q9Y653 693 aa9.16□□□□□ -0.94
PTPRM-213ENST00000580949 ITSN2Q9NZM3 1697 aa9.16□□□□□ -0.94
PTPRM-213ENST00000580949 NCOA1Q15788 1441 aa9.15□□□□□ -0.94
PTPRM-213ENST00000580949 EFCAB2Q5VUJ9 269 aa9.15□□□□□ -0.94
PTPRM-213ENST00000580949 LAPTM4BQ86VI4 370 aa9.15□□□□□ -0.94
PTPRM-213ENST00000580949 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
PTPRM-213ENST00000580949 OATP04181 439 aa9.14□□□□□ -0.95
PTPRM-213ENST00000580949 NUDT18Q6ZVK8 323 aa9.14□□□□□ -0.95
PTPRM-213ENST00000580949 MRPL50Q8N5N7 158 aaKnown RBP9.14□□□□□ -0.95
PTPRM-213ENST00000580949 STAC3Q96MF2 364 aa9.14□□□□□ -0.95
PTPRM-213ENST00000580949 SAMD9LQ8IVG5 1584 aa9.14□□□□□ -0.95
PTPRM-213ENST00000580949 MAPKBP1O60336 1514 aa9.14□□□□□ -0.95
PTPRM-213ENST00000580949 ARHGEF12Q9NZN5 1544 aa9.14□□□□□ -0.95
PTPRM-213ENST00000580949 KDM6BO15054 1643 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 PREX2Q70Z35 1606 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 IRF6O14896 467 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 RBM46Q8TBY0 533 aaKnown RBP9.13□□□□□ -0.95
PTPRM-213ENST00000580949 EYA1Q99502 592 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 ARHGAP5Q13017 1502 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 CDC42BPBQ9Y5S2 1711 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 KIAA1107Q9UPP5 1409 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 RIMBP3CA6NJZ7 1639 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 RIMBP3BA6NNM3 1639 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 RIMBP3Q9UFD9 1639 aa9.13□□□□□ -0.95
PTPRM-213ENST00000580949 TSPY4P0CV99 314 aa9.12□□□□□ -0.95
PTPRM-213ENST00000580949 TSPY10P0CW01 314 aa9.12□□□□□ -0.95
PTPRM-213ENST00000580949 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
PTPRM-213ENST00000580949 RSPH4AQ5TD94 716 aa9.12□□□□□ -0.95
PTPRM-213ENST00000580949 SPNS2Q8IVW8 549 aa9.12□□□□□ -0.95
PTPRM-213ENST00000580949 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
PTPRM-213ENST00000580949 SEPT9Q9UHD8 586 aaPredicted RBP9.12□□□□□ -0.95
PTPRM-213ENST00000580949 ADGRL2O95490 1459 aa9.12□□□□□ -0.95
PTPRM-213ENST00000580949 C9orf84Q5VXU9 1444 aa9.12□□□□□ -0.95
PTPRM-213ENST00000580949 ANKRD30AQ9BXX3 1397 aa9.12□□□□□ -0.95
PTPRM-213ENST00000580949 SMAPO00193 183 aa9.11□□□□□ -0.95
PTPRM-213ENST00000580949 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
PTPRM-213ENST00000580949 TPRNQ4KMQ1 711 aa9.11□□□□□ -0.95
PTPRM-213ENST00000580949 TRIM52Q96A61 297 aa9.11□□□□□ -0.95
PTPRM-213ENST00000580949 SIN3AQ96ST3 1273 aa9.11□□□□□ -0.95
PTPRM-213ENST00000580949 ARHGEF5Q12774 1597 aa9.11□□□□□ -0.95
PTPRM-213ENST00000580949 SHANK2Q9UPX8 1470 aa9.1□□□□□ -0.95
PTPRM-213ENST00000580949 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
PTPRM-213ENST00000580949 PXYLP1Q8TE99 480 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms