RNA–Protein interactions for RNA: ENST00000580621.5

KRT16P3-203, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene KRT16P3, Length 1,939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-203ENST00000580621 NSD3Q9BZ95 1437 aa26.61■■□□□ 1.85
KRT16P3-203ENST00000580621 USP32Q8NFA0 1604 aa26.61■■□□□ 1.85
KRT16P3-203ENST00000580621 METP08581 1390 aa26.61■■□□□ 1.85
KRT16P3-203ENST00000580621 KNDC1Q76NI1 1749 aa26.6■■□□□ 1.85
KRT16P3-203ENST00000580621 PLPPR3Q6T4P5 718 aa26.59■■□□□ 1.85
KRT16P3-203ENST00000580621 NINLQ9Y2I6 1382 aa26.58■■□□□ 1.85
KRT16P3-203ENST00000580621 SRPK2P78362 688 aaKnown RBP26.58■■□□□ 1.85
KRT16P3-203ENST00000580621 ANKRD36BQ8N2N9 1353 aa26.58■■□□□ 1.84
KRT16P3-203ENST00000580621 ATAD2Q6PL18 1390 aa26.56■■□□□ 1.84
KRT16P3-203ENST00000580621 PLEKHG1Q9ULL1 1385 aa26.56■■□□□ 1.84
KRT16P3-203ENST00000580621 BCANQ96GW7 911 aa26.56■■□□□ 1.84
KRT16P3-203ENST00000580621 RIMS1Q86UR5 1692 aaKnown RBP26.56■■□□□ 1.84
KRT16P3-203ENST00000580621 SLIT1O75093 1534 aa26.56■■□□□ 1.84
KRT16P3-203ENST00000580621 INSRP06213 1382 aa26.56■■□□□ 1.84
KRT16P3-203ENST00000580621 PLEKHH1Q9ULM0 1364 aa26.55■■□□□ 1.84
KRT16P3-203ENST00000580621 ARHGAP23Q9P227 1491 aa26.55■■□□□ 1.84
KRT16P3-203ENST00000580621 LTKP29376 864 aa26.55■■□□□ 1.84
KRT16P3-203ENST00000580621 WAPLQ7Z5K2 1190 aa26.55■■□□□ 1.84
KRT16P3-203ENST00000580621 ADAMTS13Q76LX8 1427 aa26.54■■□□□ 1.84
KRT16P3-203ENST00000580621 SUPT16HQ9Y5B9 1047 aaKnown RBP26.54■■□□□ 1.84
KRT16P3-203ENST00000580621 TECPR2O15040 1411 aa26.54■■□□□ 1.84
KRT16P3-203ENST00000580621 TXNDC2Q86VQ3 553 aa26.53■■□□□ 1.84
KRT16P3-203ENST00000580621 CDK19Q9BWU1 502 aa26.52■■□□□ 1.84
KRT16P3-203ENST00000580621 CPS1P31327 1500 aa26.52■■□□□ 1.84
KRT16P3-203ENST00000580621 EID1Q9Y6B2 187 aa26.51■■□□□ 1.83
KRT16P3-203ENST00000580621 SIRT1Q96EB6 747 aa26.51■■□□□ 1.83
KRT16P3-203ENST00000580621 BLMP54132 1417 aaPredicted RBP26.5■■□□□ 1.83
KRT16P3-203ENST00000580621 FAM135BQ49AJ0 1406 aa26.5■■□□□ 1.83
KRT16P3-203ENST00000580621 CGNL1Q0VF96 1302 aa26.49■■□□□ 1.83
KRT16P3-203ENST00000580621 ADAMTSL3P82987 1691 aa26.49■■□□□ 1.83
KRT16P3-203ENST00000580621 THEMISQ8N1K5 641 aaPredicted RBP26.48■■□□□ 1.83
KRT16P3-203ENST00000580621 MED14O60244 1454 aa26.47■■□□□ 1.83
KRT16P3-203ENST00000580621 NEFLP07196 543 aa26.47■■□□□ 1.83
KRT16P3-203ENST00000580621 A0A1W2PP64 1363 aa26.47■■□□□ 1.83
KRT16P3-203ENST00000580621 MORC1Q86VD1 984 aa26.46■■□□□ 1.83
KRT16P3-203ENST00000580621 SMG6Q86US8 1419 aaKnown RBP26.45■■□□□ 1.83
KRT16P3-203ENST00000580621 SENP3-EIF4A1A0A087X0R7 540 aa26.45■■□□□ 1.83
KRT16P3-203ENST00000580621 NSD2O96028 1365 aa26.45■■□□□ 1.83
KRT16P3-203ENST00000580621 CEP170BQ9Y4F5 1589 aaPredicted RBP26.45■■□□□ 1.82
KRT16P3-203ENST00000580621 FKBP8Q14318 412 aa26.45■■□□□ 1.82
KRT16P3-203ENST00000580621 CD163L1Q9NR16 1453 aa26.45■■□□□ 1.82
KRT16P3-203ENST00000580621 TERF2IPQ9NYB0 399 aa26.44■■□□□ 1.82
KRT16P3-203ENST00000580621 WDR43Q15061 677 aaKnown RBP eCLIP26.43■■□□□ 1.82
KRT16P3-203ENST00000580621 ADAMTS8Q9UP79 889 aa26.42■■□□□ 1.82
KRT16P3-203ENST00000580621 WASLO00401 505 aaPredicted RBP26.4■■□□□ 1.82
KRT16P3-203ENST00000580621 ROBO2Q9HCK4 1378 aa26.4■■□□□ 1.82
KRT16P3-203ENST00000580621 NUDCQ9Y266 331 aa26.39■■□□□ 1.82
KRT16P3-203ENST00000580621 SLC26A8Q96RN1 970 aa26.39■■□□□ 1.81
KRT16P3-203ENST00000580621 DIP2AQ14689 1571 aa26.39■■□□□ 1.81
KRT16P3-203ENST00000580621 HDGFL2Q7Z4V5 671 aaPredicted RBP26.38■■□□□ 1.81
KRT16P3-203ENST00000580621 CABP1Q9NZU7 370 aa26.38■■□□□ 1.81
KRT16P3-203ENST00000580621 POLR3AO14802 1390 aaPredicted RBP26.38■■□□□ 1.81
KRT16P3-203ENST00000580621 ANKRD26Q9UPS8 1709 aa26.37■■□□□ 1.81
KRT16P3-203ENST00000580621 ATP7BP35670 1465 aa26.37■■□□□ 1.81
KRT16P3-203ENST00000580621 ZNF142P52746 1687 aaPredicted RBP26.37■■□□□ 1.81
KRT16P3-203ENST00000580621 TBX22Q9Y458 520 aa26.37■■□□□ 1.81
KRT16P3-203ENST00000580621 PTPRUQ92729 1446 aa26.37■■□□□ 1.81
KRT16P3-203ENST00000580621 TNNT2P45379 298 aaPredicted RBP26.35■■□□□ 1.81
KRT16P3-203ENST00000580621 ADGRB2O60241 1585 aa26.34■■□□□ 1.81
KRT16P3-203ENST00000580621 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
KRT16P3-203ENST00000580621 SETD1BQ9UPS6 1966 aaKnown RBP26.34■■□□□ 1.81
KRT16P3-203ENST00000580621 KIF20BQ96Q89 1820 aa26.33■■□□□ 1.81
KRT16P3-203ENST00000580621 SALL2Q9Y467 1007 aaPredicted RBP26.33■■□□□ 1.81
KRT16P3-203ENST00000580621 PDE3BQ13370 1112 aa26.31■■□□□ 1.8
KRT16P3-203ENST00000580621 PPIP5K1Q6PFW1 1433 aa26.31■■□□□ 1.8
KRT16P3-203ENST00000580621 SHPRHQ149N8 1683 aa26.3■■□□□ 1.8
KRT16P3-203ENST00000580621 NUDT16Q96DE0 195 aaKnown RBP26.29■■□□□ 1.8
KRT16P3-203ENST00000580621 FYB1O15117 783 aa26.29■■□□□ 1.8
KRT16P3-203ENST00000580621 AMOTL2Q9Y2J4 779 aa26.29■■□□□ 1.8
KRT16P3-203ENST00000580621 GGNBP2Q9H3C7 697 aa26.28■■□□□ 1.8
KRT16P3-203ENST00000580621 PTCH1Q13635 1447 aa26.28■■□□□ 1.8
KRT16P3-203ENST00000580621 CPSF1Q10570 1443 aaKnown RBP26.27■■□□□ 1.8
KRT16P3-203ENST00000580621 MTHFSP49914 203 aa26.27■■□□□ 1.8
KRT16P3-203ENST00000580621 CDC42BPGQ6DT37 1551 aa26.27■■□□□ 1.8
KRT16P3-203ENST00000580621 XRN1Q8IZH2 1706 aaKnown RBP26.26■■□□□ 1.8
KRT16P3-203ENST00000580621 CCDC61Q9Y6R9 512 aa26.26■■□□□ 1.79
KRT16P3-203ENST00000580621 CFAP53Q96M91 514 aa26.24■■□□□ 1.79
KRT16P3-203ENST00000580621 AKAP12Q02952 1782 aa26.24■■□□□ 1.79
KRT16P3-203ENST00000580621 ITSN1Q15811 1721 aa26.24■■□□□ 1.79
KRT16P3-203ENST00000580621 MON2Q7Z3U7 1717 aa26.24■■□□□ 1.79
KRT16P3-203ENST00000580621 PRR36Q9H6K5 1346 aa26.23■■□□□ 1.79
KRT16P3-203ENST00000580621 EDC4Q6P2E9 1401 aaKnown RBP26.22■■□□□ 1.79
KRT16P3-203ENST00000580621 TOPAZ1Q8N9V7 1692 aa26.22■■□□□ 1.79
KRT16P3-203ENST00000580621 ANKLE2Q86XL3 938 aa26.22■■□□□ 1.79
KRT16P3-203ENST00000580621 PIK3R4Q99570 1358 aa26.21■■□□□ 1.79
KRT16P3-203ENST00000580621 IRX6P78412 446 aaPredicted RBP26.21■■□□□ 1.79
KRT16P3-203ENST00000580621 CCDC146Q8IYE0 955 aa26.21■■□□□ 1.79
KRT16P3-203ENST00000580621 NCKAP5LQ9HCH0 1330 aa26.21■■□□□ 1.79
KRT16P3-203ENST00000580621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.19■■□□□ 1.78
KRT16P3-203ENST00000580621 CDCA7LQ96GN5 454 aa26.18■■□□□ 1.78
KRT16P3-203ENST00000580621 RNF123Q5XPI4 1314 aa26.17■■□□□ 1.78
KRT16P3-203ENST00000580621 ERICH6BQ5W0A0 696 aa26.16■■□□□ 1.78
KRT16P3-203ENST00000580621 ZNF521Q96K83 1311 aa26.15■■□□□ 1.78
KRT16P3-203ENST00000580621 CHD2O14647 1828 aaKnown RBP26.14■■□□□ 1.78
KRT16P3-203ENST00000580621 APAF1O14727 1248 aa26.14■■□□□ 1.78
KRT16P3-203ENST00000580621 ZNF692Q9BU19 519 aaPredicted RBP26.14■■□□□ 1.77
KRT16P3-203ENST00000580621 COL3A1P02461 1466 aaPredicted RBP26.13■■□□□ 1.77
KRT16P3-203ENST00000580621 KCNA6P17658 529 aa26.12■■□□□ 1.77
KRT16P3-203ENST00000580621 PLEKHG3A1L390 1219 aa26.12■■□□□ 1.77
KRT16P3-203ENST00000580621 NGEFQ8N5V2 710 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 278 ms