RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 L3MBTL2Q969R5 705 aa11.21□□□□□ -0.61
RFFL-207ENST00000580569 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
RFFL-207ENST00000580569 LRP6O75581 1613 aa11.2□□□□□ -0.62
RFFL-207ENST00000580569 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
RFFL-207ENST00000580569 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
RFFL-207ENST00000580569 ZNF772Q68DY9 489 aaPredicted RBP11.2□□□□□ -0.62
RFFL-207ENST00000580569 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
RFFL-207ENST00000580569 ADGRB3O60242 1522 aa11.19□□□□□ -0.62
RFFL-207ENST00000580569 NUP155O75694 1391 aa11.19□□□□□ -0.62
RFFL-207ENST00000580569 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.18□□□□□ -0.62
RFFL-207ENST00000580569 IDI1Q13907 227 aa11.18□□□□□ -0.62
RFFL-207ENST00000580569 SLC26A8Q96RN1 970 aa11.18□□□□□ -0.62
RFFL-207ENST00000580569 NOS1P29475 1434 aa11.18□□□□□ -0.62
RFFL-207ENST00000580569 E9PCH4 1651 aa11.17□□□□□ -0.62
RFFL-207ENST00000580569 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
RFFL-207ENST00000580569 NBPF8Q3BBV2 869 aa11.16□□□□□ -0.62
RFFL-207ENST00000580569 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
RFFL-207ENST00000580569 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
RFFL-207ENST00000580569 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
RFFL-207ENST00000580569 SPATA31E1Q6ZUB1 1445 aa11.15□□□□□ -0.62
RFFL-207ENST00000580569 KANK1Q14678 1352 aa11.15□□□□□ -0.63
RFFL-207ENST00000580569 RXRBP28702 533 aa11.14□□□□□ -0.63
RFFL-207ENST00000580569 SPHKAPQ2M3C7 1700 aa11.14□□□□□ -0.63
RFFL-207ENST00000580569 PLEKHG1Q9ULL1 1385 aa11.14□□□□□ -0.63
RFFL-207ENST00000580569 SPDYE2BA6NHP3 402 aa11.13□□□□□ -0.63
RFFL-207ENST00000580569 SPDYE6P0CI01 402 aa11.13□□□□□ -0.63
RFFL-207ENST00000580569 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
RFFL-207ENST00000580569 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
RFFL-207ENST00000580569 SLC52A1Q9NWF4 448 aa11.13□□□□□ -0.63
RFFL-207ENST00000580569 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
RFFL-207ENST00000580569 MEX3CQ5U5Q3 659 aaKnown RBP11.12□□□□□ -0.63
RFFL-207ENST00000580569 HIRIP3Q9BW71 556 aaPredicted RBP11.12□□□□□ -0.63
RFFL-207ENST00000580569 NHSL1Q5SYE7 1610 aa11.12□□□□□ -0.63
RFFL-207ENST00000580569 TRPM1Q7Z4N2 1603 aa11.12□□□□□ -0.63
RFFL-207ENST00000580569 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
RFFL-207ENST00000580569 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
RFFL-207ENST00000580569 TBX22Q9Y458 520 aa11.11□□□□□ -0.63
RFFL-207ENST00000580569 HSPA5P11021 654 aaKnown RBP11.1□□□□□ -0.63
RFFL-207ENST00000580569 DDX10Q13206 875 aaKnown RBP11.1□□□□□ -0.63
RFFL-207ENST00000580569 C19orf44Q9H6X5 657 aa11.1□□□□□ -0.63
RFFL-207ENST00000580569 PIK3R4Q99570 1358 aa11.1□□□□□ -0.63
RFFL-207ENST00000580569 RALGAPBQ86X10 1494 aa11.1□□□□□ -0.63
RFFL-207ENST00000580569 EP400Q96L91 3159 aa11.09□□□□□ -0.63
RFFL-207ENST00000580569 HDGFP51858 240 aaKnown RBP11.09□□□□□ -0.63
RFFL-207ENST00000580569 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
RFFL-207ENST00000580569 LAMC1P11047 1609 aa11.09□□□□□ -0.63
RFFL-207ENST00000580569 DCCP43146 1447 aa11.09□□□□□ -0.63
RFFL-207ENST00000580569 ADAMTS13Q76LX8 1427 aa11.08□□□□□ -0.64
RFFL-207ENST00000580569 RIMS2Q9UQ26 1411 aa11.08□□□□□ -0.64
RFFL-207ENST00000580569 WASHC2AQ641Q2 1341 aa11.08□□□□□ -0.64
RFFL-207ENST00000580569 EIF4G2P78344 907 aaKnown RBP eCLIP11.07□□□□□ -0.64
RFFL-207ENST00000580569 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
RFFL-207ENST00000580569 RGS12O14924 1447 aa11.07□□□□□ -0.64
RFFL-207ENST00000580569 AFF2P51816 1311 aa11.07□□□□□ -0.64
RFFL-207ENST00000580569 CLTCL1P53675 1640 aa11.06□□□□□ -0.64
RFFL-207ENST00000580569 TRPM2O94759 1503 aa11.06□□□□□ -0.64
RFFL-207ENST00000580569 PLEKHG5O94827 1062 aa11.06□□□□□ -0.64
RFFL-207ENST00000580569 ATF3P18847 181 aa11.06□□□□□ -0.64
RFFL-207ENST00000580569 BRINP3Q76B58 766 aa11.06□□□□□ -0.64
RFFL-207ENST00000580569 ASXL1Q8IXJ9 1541 aa11.05□□□□□ -0.64
RFFL-207ENST00000580569 C11orf95C9JLR9 678 aaPredicted RBP11.05□□□□□ -0.64
RFFL-207ENST00000580569 RBM6P78332 1123 aaKnown RBP11.05□□□□□ -0.64
RFFL-207ENST00000580569 XRN1Q8IZH2 1706 aaKnown RBP11.05□□□□□ -0.64
RFFL-207ENST00000580569 RNF25Q96BH1 459 aaPredicted RBP11.05□□□□□ -0.64
RFFL-207ENST00000580569 IFT172Q9UG01 1749 aa11.05□□□□□ -0.64
RFFL-207ENST00000580569 KIF1BO60333 1816 aa11.05□□□□□ -0.64
RFFL-207ENST00000580569 CCDC144AA2RUR9 1427 aa11.04□□□□□ -0.64
RFFL-207ENST00000580569 CENPBP07199 599 aaPredicted RBP11.04□□□□□ -0.64
RFFL-207ENST00000580569 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.04□□□□□ -0.64
RFFL-207ENST00000580569 CCDC7Q96M83 1385 aa11.03□□□□□ -0.64
RFFL-207ENST00000580569 PRAG1Q86YV5 1406 aa11.03□□□□□ -0.64
RFFL-207ENST00000580569 C14orf37Q86TY3 774 aa11.03□□□□□ -0.64
RFFL-207ENST00000580569 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
RFFL-207ENST00000580569 LRRC59Q96AG4 307 aaKnown RBP11.02□□□□□ -0.65
RFFL-207ENST00000580569 QTRT2Q9H974 415 aaKnown RBP11.02□□□□□ -0.65
RFFL-207ENST00000580569 NRXN3Q9Y4C0 1643 aa11.02□□□□□ -0.65
RFFL-207ENST00000580569 MST1RQ04912 1400 aa11.01□□□□□ -0.65
RFFL-207ENST00000580569 KIAA1210Q9ULL0 1709 aa11.01□□□□□ -0.65
RFFL-207ENST00000580569 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
RFFL-207ENST00000580569 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
RFFL-207ENST00000580569 CCER2I3L3R5 266 aa11.01□□□□□ -0.65
RFFL-207ENST00000580569 NKX1-1Q15270 411 aaPredicted RBP11.01□□□□□ -0.65
RFFL-207ENST00000580569 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
RFFL-207ENST00000580569 ATAD2Q6PL18 1390 aa11.01□□□□□ -0.65
RFFL-207ENST00000580569 PTPRUQ92729 1446 aa11.01□□□□□ -0.65
RFFL-207ENST00000580569 NGLY1Q96IV0 654 aa11□□□□□ -0.65
RFFL-207ENST00000580569 GPRASP1Q5JY77 1395 aa11□□□□□ -0.65
RFFL-207ENST00000580569 PNPLA6Q8IY17 1366 aa11□□□□□ -0.65
RFFL-207ENST00000580569 USP47Q96K76 1375 aa11□□□□□ -0.65
RFFL-207ENST00000580569 SETBP1Q9Y6X0 1596 aa10.99□□□□□ -0.65
RFFL-207ENST00000580569 MARF1Q9Y4F3 1742 aaKnown RBP10.99□□□□□ -0.65
RFFL-207ENST00000580569 AMOTL2Q9Y2J4 779 aa10.99□□□□□ -0.65
RFFL-207ENST00000580569 NALCNQ8IZF0 1738 aa10.98□□□□□ -0.65
RFFL-207ENST00000580569 YTHDC1Q96MU7 727 aaKnown RBP10.98□□□□□ -0.65
RFFL-207ENST00000580569 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
RFFL-207ENST00000580569 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
RFFL-207ENST00000580569 KIF7Q2M1P5 1343 aa10.98□□□□□ -0.65
RFFL-207ENST00000580569 DSG3P32926 999 aa10.97□□□□□ -0.65
RFFL-207ENST00000580569 NUTM2DQ5VT03 806 aaPredicted RBP10.97□□□□□ -0.65
RFFL-207ENST00000580569 DCAF11Q8TEB1 546 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms