RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 IFFO2Q5TF58 517 aa5.3□□□□□ -1.56
CDH19-204ENST00000579658 BRINP3Q76B58 766 aa5.3□□□□□ -1.56
CDH19-204ENST00000579658 C14orf37Q86TY3 774 aa5.3□□□□□ -1.56
CDH19-204ENST00000579658 XRN1Q8IZH2 1706 aaKnown RBP5.3□□□□□ -1.56
CDH19-204ENST00000579658 GCC2Q8IWJ2 1684 aa5.3□□□□□ -1.56
CDH19-204ENST00000579658 ZNF644Q9H582 1327 aaPredicted RBP5.3□□□□□ -1.56
CDH19-204ENST00000579658 FXR2P51116 673 aaKnown RBP eCLIP5.3□□□□□ -1.56
CDH19-204ENST00000579658 C8orf37Q96NL8 207 aa5.3□□□□□ -1.56
CDH19-204ENST00000579658 MST1RQ04912 1400 aa5.29□□□□□ -1.56
CDH19-204ENST00000579658 FNBP4Q8N3X1 1017 aaPredicted RBP5.29□□□□□ -1.56
CDH19-204ENST00000579658 SLC26A8Q96RN1 970 aa5.29□□□□□ -1.56
CDH19-204ENST00000579658 RIMS2Q9UQ26 1411 aa5.29□□□□□ -1.56
CDH19-204ENST00000579658 RGPD1P0DJD0 1748 aa5.29□□□□□ -1.56
CDH19-204ENST00000579658 USP21Q9UK80 565 aa5.29□□□□□ -1.56
CDH19-204ENST00000579658 TMEM131LA2VDJ0 1609 aa5.29□□□□□ -1.56
CDH19-204ENST00000579658 MYOM3Q5VTT5 1437 aa5.29□□□□□ -1.56
CDH19-204ENST00000579658 CLCN6P51797 869 aa5.28□□□□□ -1.56
CDH19-204ENST00000579658 AKT1S1Q96B36 256 aa5.28□□□□□ -1.56
CDH19-204ENST00000579658 BCL9LQ86UU0 1499 aa5.28□□□□□ -1.56
CDH19-204ENST00000579658 IQGAP3Q86VI3 1631 aa5.28□□□□□ -1.56
CDH19-204ENST00000579658 MYO5BQ9ULV0 1848 aa5.28□□□□□ -1.56
CDH19-204ENST00000579658 IDI1Q13907 227 aa5.27□□□□□ -1.57
CDH19-204ENST00000579658 VSIG10Q8N0Z9 540 aa5.27□□□□□ -1.57
CDH19-204ENST00000579658 ADGRL3Q9HAR2 1447 aa5.27□□□□□ -1.57
CDH19-204ENST00000579658 RALGAPBQ86X10 1494 aa5.27□□□□□ -1.57
CDH19-204ENST00000579658 YY1P25490 414 aa5.27□□□□□ -1.57
CDH19-204ENST00000579658 ADAMTS13Q76LX8 1427 aa5.27□□□□□ -1.57
CDH19-204ENST00000579658 ADGRB2O60241 1585 aa5.26□□□□□ -1.57
CDH19-204ENST00000579658 NALCNQ8IZF0 1738 aa5.26□□□□□ -1.57
CDH19-204ENST00000579658 KIF15Q9NS87 1388 aa5.26□□□□□ -1.57
CDH19-204ENST00000579658 MYOM2P54296 1465 aa5.26□□□□□ -1.57
CDH19-204ENST00000579658 NWD2Q9ULI1 1742 aa5.26□□□□□ -1.57
CDH19-204ENST00000579658 VPS8Q8N3P4 1428 aa5.26□□□□□ -1.57
CDH19-204ENST00000579658 BAG6P46379 1132 aa5.26□□□□□ -1.57
CDH19-204ENST00000579658 DISP2A7MBM2 1401 aa5.25□□□□□ -1.57
CDH19-204ENST00000579658 EVX2Q03828 476 aa5.25□□□□□ -1.57
CDH19-204ENST00000579658 KANK4Q5T7N3 995 aaPredicted RBP5.25□□□□□ -1.57
CDH19-204ENST00000579658 ARXQ96QS3 562 aa5.25□□□□□ -1.57
CDH19-204ENST00000579658 BRWD3Q6RI45 1802 aa5.25□□□□□ -1.57
CDH19-204ENST00000579658 SOS2Q07890 1332 aaPredicted RBP5.25□□□□□ -1.57
CDH19-204ENST00000579658 HRCP23327 699 aa5.25□□□□□ -1.57
CDH19-204ENST00000579658 PPARGC1BQ86YN6 1023 aaKnown RBP5.25□□□□□ -1.57
CDH19-204ENST00000579658 PARD3Q8TEW0 1356 aa5.25□□□□□ -1.57
CDH19-204ENST00000579658 PRAG1Q86YV5 1406 aa5.25□□□□□ -1.57
CDH19-204ENST00000579658 GJD4Q96KN9 370 aaPredicted RBP5.24□□□□□ -1.57
CDH19-204ENST00000579658 NINLQ9Y2I6 1382 aa5.24□□□□□ -1.57
CDH19-204ENST00000579658 GLI3P10071 1580 aa5.24□□□□□ -1.57
CDH19-204ENST00000579658 C1orf167Q5SNV9 1468 aa5.23□□□□□ -1.57
CDH19-204ENST00000579658 LRPPRCP42704 1394 aaKnown RBP5.23□□□□□ -1.57
CDH19-204ENST00000579658 SLIT2O94813 1529 aa5.23□□□□□ -1.57
CDH19-204ENST00000579658 NEXMIFQ5QGS0 1516 aa5.23□□□□□ -1.57
CDH19-204ENST00000579658 ANKRD30AQ9BXX3 1397 aa5.22□□□□□ -1.57
CDH19-204ENST00000579658 ADAMTS2O95450 1211 aa5.22□□□□□ -1.57
CDH19-204ENST00000579658 KLHL34Q8N239 644 aa5.22□□□□□ -1.57
CDH19-204ENST00000579658 AMOTL2Q9Y2J4 779 aa5.22□□□□□ -1.57
CDH19-204ENST00000579658 NRXN3Q9Y4C0 1643 aa5.22□□□□□ -1.57
CDH19-204ENST00000579658 KIF1AQ12756 1690 aa5.22□□□□□ -1.57
CDH19-204ENST00000579658 UNC5CLQ8IV45 518 aa5.22□□□□□ -1.57
CDH19-204ENST00000579658 SPINK5Q9NQ38 1064 aaPredicted RBP5.22□□□□□ -1.57
CDH19-204ENST00000579658 PTPRUQ92729 1446 aa5.21□□□□□ -1.57
CDH19-204ENST00000579658 USP32Q8NFA0 1604 aa5.21□□□□□ -1.57
CDH19-204ENST00000579658 ADGRL2O95490 1459 aa5.21□□□□□ -1.57
CDH19-204ENST00000579658 TNS1Q9HBL0 1735 aaKnown RBP5.21□□□□□ -1.58
CDH19-204ENST00000579658 CDC42BPGQ6DT37 1551 aa5.21□□□□□ -1.58
CDH19-204ENST00000579658 ONECUT3O60422 494 aaPredicted RBP5.21□□□□□ -1.58
CDH19-204ENST00000579658 PLCH1Q4KWH8 1693 aa5.21□□□□□ -1.58
CDH19-204ENST00000579658 RREB1Q92766 1687 aa5.21□□□□□ -1.58
CDH19-204ENST00000579658 NPHP3Q7Z494 1330 aa5.21□□□□□ -1.58
CDH19-204ENST00000579658 GTF3C3Q9Y5Q9 886 aa5.2□□□□□ -1.58
CDH19-204ENST00000579658 PXDNQ92626 1479 aa5.2□□□□□ -1.58
CDH19-204ENST00000579658 ATXN8OSP0DMR3 200 aa5.2□□□□□ -1.58
CDH19-204ENST00000579658 VPS72Q15906 364 aa5.2□□□□□ -1.58
CDH19-204ENST00000579658 ZNF219Q9P2Y4 722 aaPredicted RBP5.2□□□□□ -1.58
CDH19-204ENST00000579658 ABCC5O15440 1437 aa5.2□□□□□ -1.58
CDH19-204ENST00000579658 DAPK1P53355 1430 aa5.2□□□□□ -1.58
CDH19-204ENST00000579658 KRT27Q7Z3Y8 459 aa5.19□□□□□ -1.58
CDH19-204ENST00000579658 DEFB132Q7Z7B7 95 aa5.19□□□□□ -1.58
CDH19-204ENST00000579658 ATF5Q9Y2D1 282 aaPredicted RBP5.19□□□□□ -1.58
CDH19-204ENST00000579658 HFM1A2PYH4 1435 aa5.19□□□□□ -1.58
CDH19-204ENST00000579658 RGPD3A6NKT7 1758 aaPredicted RBP5.19□□□□□ -1.58
CDH19-204ENST00000579658 RGPD4Q7Z3J3 1758 aa5.19□□□□□ -1.58
CDH19-204ENST00000579658 CHD4Q14839 1912 aa5.19□□□□□ -1.58
CDH19-204ENST00000579658 E9PCH4 1651 aa5.19□□□□□ -1.58
CDH19-204ENST00000579658 SENP3-EIF4A1A0A087X0R7 540 aa5.18□□□□□ -1.58
CDH19-204ENST00000579658 C19orf67A6NJJ6 358 aa5.18□□□□□ -1.58
CDH19-204ENST00000579658 SEPT12Q8IYM1 358 aa5.18□□□□□ -1.58
CDH19-204ENST00000579658 NUP188Q5SRE5 1749 aa5.17□□□□□ -1.58
CDH19-204ENST00000579658 NRAPQ86VF7 1730 aa5.17□□□□□ -1.58
CDH19-204ENST00000579658 CCDC144AA2RUR9 1427 aa5.17□□□□□ -1.58
CDH19-204ENST00000579658 PSDA5PKW4 1024 aaPredicted RBP5.17□□□□□ -1.58
CDH19-204ENST00000579658 ABCA3Q99758 1704 aa5.17□□□□□ -1.58
CDH19-204ENST00000579658 C11orf95C9JLR9 678 aaPredicted RBP5.17□□□□□ -1.58
CDH19-204ENST00000579658 NBPF8Q3BBV2 869 aa5.17□□□□□ -1.58
CDH19-204ENST00000579658 NBPF14Q5TI25 921 aa5.17□□□□□ -1.58
CDH19-204ENST00000579658 THSD7AQ9UPZ6 1657 aa5.17□□□□□ -1.58
CDH19-204ENST00000579658 RRBP1Q9P2E9 1410 aaKnown RBP5.17□□□□□ -1.58
CDH19-204ENST00000579658 C1QTNF8P60827 252 aa5.16□□□□□ -1.58
CDH19-204ENST00000579658 RRP7BPQ9NSQ0 103 aa5.16□□□□□ -1.58
CDH19-204ENST00000579658 COL14A1Q05707 1796 aaKnown RBP5.16□□□□□ -1.58
CDH19-204ENST00000579658 SPON1Q9HCB6 807 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms