RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 SLC12A5Q9H2X9 1139 aa27.46■■□□□ 1.99
SMG8-203ENST00000578922 ADAMTS13Q76LX8 1427 aa27.46■■□□□ 1.99
SMG8-203ENST00000578922 ARHGAP23Q9P227 1491 aa27.45■■□□□ 1.99
SMG8-203ENST00000578922 CEP170BQ9Y4F5 1589 aaPredicted RBP27.45■■□□□ 1.99
SMG8-203ENST00000578922 SRPK2P78362 688 aaKnown RBP27.45■■□□□ 1.98
SMG8-203ENST00000578922 MYBBP1AQ9BQG0 1328 aaKnown RBP27.44■■□□□ 1.98
SMG8-203ENST00000578922 PARD3Q8TEW0 1356 aa27.44■■□□□ 1.98
SMG8-203ENST00000578922 ABCC11Q96J66 1382 aa27.44■■□□□ 1.98
SMG8-203ENST00000578922 CARD14Q9BXL6 1004 aa27.42■■□□□ 1.98
SMG8-203ENST00000578922 DLC1Q96QB1 1528 aa27.41■■□□□ 1.98
SMG8-203ENST00000578922 AMER1Q5JTC6 1135 aaPredicted RBP27.41■■□□□ 1.98
SMG8-203ENST00000578922 CDK19Q9BWU1 502 aa27.37■■□□□ 1.97
SMG8-203ENST00000578922 HNRNPUQ00839 825 aaKnown RBP eCLIP27.36■■□□□ 1.97
SMG8-203ENST00000578922 NEFLP07196 543 aa27.35■■□□□ 1.97
SMG8-203ENST00000578922 PUS7Q96PZ0 661 aaKnown RBP27.35■■□□□ 1.97
SMG8-203ENST00000578922 MED14O60244 1454 aa27.33■■□□□ 1.97
SMG8-203ENST00000578922 FKBP8Q14318 412 aa27.33■■□□□ 1.97
SMG8-203ENST00000578922 NLRP13Q86W25 1043 aa27.33■■□□□ 1.97
SMG8-203ENST00000578922 TSHZ2Q9NRE2 1034 aa27.33■■□□□ 1.97
SMG8-203ENST00000578922 BRD4O60885 1362 aaPredicted RBP27.33■■□□□ 1.96
SMG8-203ENST00000578922 ROBO2Q9HCK4 1378 aa27.33■■□□□ 1.96
SMG8-203ENST00000578922 NSD3Q9BZ95 1437 aa27.32■■□□□ 1.96
SMG8-203ENST00000578922 SETD1BQ9UPS6 1966 aaKnown RBP27.32■■□□□ 1.96
SMG8-203ENST00000578922 TECPR2O15040 1411 aa27.31■■□□□ 1.96
SMG8-203ENST00000578922 KNDC1Q76NI1 1749 aa27.31■■□□□ 1.96
SMG8-203ENST00000578922 PTPRUQ92729 1446 aa27.31■■□□□ 1.96
SMG8-203ENST00000578922 TBX22Q9Y458 520 aa27.3■■□□□ 1.96
SMG8-203ENST00000578922 ZNF142P52746 1687 aaPredicted RBP27.3■■□□□ 1.96
SMG8-203ENST00000578922 CPS1P31327 1500 aa27.29■■□□□ 1.96
SMG8-203ENST00000578922 ANKLE2Q86XL3 938 aa27.29■■□□□ 1.96
SMG8-203ENST00000578922 FAM135BQ49AJ0 1406 aa27.28■■□□□ 1.96
SMG8-203ENST00000578922 PNISRQ8TF01 805 aaKnown RBP27.28■■□□□ 1.96
SMG8-203ENST00000578922 AMOTL2Q9Y2J4 779 aa27.28■■□□□ 1.96
SMG8-203ENST00000578922 ATAD2Q6PL18 1390 aa27.28■■□□□ 1.96
SMG8-203ENST00000578922 SIRT1Q96EB6 747 aa27.27■■□□□ 1.96
SMG8-203ENST00000578922 ANKRD36BQ8N2N9 1353 aa27.26■■□□□ 1.95
SMG8-203ENST00000578922 NPC1L1Q9UHC9 1359 aa27.25■■□□□ 1.95
SMG8-203ENST00000578922 WASLO00401 505 aaPredicted RBP27.25■■□□□ 1.95
SMG8-203ENST00000578922 PPP2R1AP30153 589 aa27.25■■□□□ 1.95
SMG8-203ENST00000578922 CABP1Q9NZU7 370 aa27.24■■□□□ 1.95
SMG8-203ENST00000578922 A0A1W2PP64 1363 aa27.23■■□□□ 1.95
SMG8-203ENST00000578922 SENP3-EIF4A1A0A087X0R7 540 aa27.22■■□□□ 1.95
SMG8-203ENST00000578922 NINLQ9Y2I6 1382 aa27.21■■□□□ 1.95
SMG8-203ENST00000578922 DIP2AQ14689 1571 aa27.21■■□□□ 1.95
SMG8-203ENST00000578922 CGNL1Q0VF96 1302 aa27.18■■□□□ 1.94
SMG8-203ENST00000578922 TNNT2P45379 298 aaPredicted RBP27.18■■□□□ 1.94
SMG8-203ENST00000578922 TERF2IPQ9NYB0 399 aa27.18■■□□□ 1.94
SMG8-203ENST00000578922 NCKAP5LQ9HCH0 1330 aa27.18■■□□□ 1.94
SMG8-203ENST00000578922 CD163L1Q9NR16 1453 aa27.17■■□□□ 1.94
SMG8-203ENST00000578922 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.17■■□□□ 1.94
SMG8-203ENST00000578922 MORC1Q86VD1 984 aa27.16■■□□□ 1.94
SMG8-203ENST00000578922 NUTM2FA1L443 756 aa27.15■■□□□ 1.94
SMG8-203ENST00000578922 KCNA6P17658 529 aa27.15■■□□□ 1.94
SMG8-203ENST00000578922 HDGFL2Q7Z4V5 671 aaPredicted RBP27.15■■□□□ 1.94
SMG8-203ENST00000578922 NUDT16Q96DE0 195 aaKnown RBP27.15■■□□□ 1.94
SMG8-203ENST00000578922 PPIP5K1Q6PFW1 1433 aa27.12■■□□□ 1.93
SMG8-203ENST00000578922 PTCH1Q13635 1447 aa27.12■■□□□ 1.93
SMG8-203ENST00000578922 USP32Q8NFA0 1604 aa27.11■■□□□ 1.93
SMG8-203ENST00000578922 PRR36Q9H6K5 1346 aa27.1■■□□□ 1.93
SMG8-203ENST00000578922 NPHP4O75161 1426 aaPredicted RBP27.1■■□□□ 1.93
SMG8-203ENST00000578922 GGNBP2Q9H3C7 697 aa27.09■■□□□ 1.93
SMG8-203ENST00000578922 XRN1Q8IZH2 1706 aaKnown RBP27.09■■□□□ 1.93
SMG8-203ENST00000578922 CCDC61Q9Y6R9 512 aa27.08■■□□□ 1.93
SMG8-203ENST00000578922 PIK3R4Q99570 1358 aa27.08■■□□□ 1.93
SMG8-203ENST00000578922 KDM4FA0A1W2PPD8 638 aa27.07■■□□□ 1.92
SMG8-203ENST00000578922 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.07■■□□□ 1.92
SMG8-203ENST00000578922 RBM33Q96EV2 1170 aaKnown RBP27.07■■□□□ 1.92
SMG8-203ENST00000578922 ADGRB2O60241 1585 aa27.06■■□□□ 1.92
SMG8-203ENST00000578922 ZBED9Q6R2W3 1325 aa27.06■■□□□ 1.92
SMG8-203ENST00000578922 ATP7BP35670 1465 aa27.06■■□□□ 1.92
SMG8-203ENST00000578922 FYB1O15117 783 aa27.04■■□□□ 1.92
SMG8-203ENST00000578922 NSD2O96028 1365 aa27.04■■□□□ 1.92
SMG8-203ENST00000578922 WDR43Q15061 677 aaKnown RBP eCLIP27.02■■□□□ 1.92
SMG8-203ENST00000578922 ADAMTS8Q9UP79 889 aa27.02■■□□□ 1.92
SMG8-203ENST00000578922 CHD2O14647 1828 aaKnown RBP27.01■■□□□ 1.91
SMG8-203ENST00000578922 HSPA2P54652 639 aa27.01■■□□□ 1.91
SMG8-203ENST00000578922 SALL2Q9Y467 1007 aaPredicted RBP27■■□□□ 1.91
SMG8-203ENST00000578922 CPSF1Q10570 1443 aaKnown RBP27■■□□□ 1.91
SMG8-203ENST00000578922 ERICH6BQ5W0A0 696 aa26.99■■□□□ 1.91
SMG8-203ENST00000578922 CDC42BPGQ6DT37 1551 aa26.98■■□□□ 1.91
SMG8-203ENST00000578922 MTHFSP49914 203 aa26.97■■□□□ 1.91
SMG8-203ENST00000578922 PMFBP1Q8TBY8 1022 aa26.94■■□□□ 1.9
SMG8-203ENST00000578922 ACEP12821 1306 aa26.94■■□□□ 1.9
SMG8-203ENST00000578922 EDC4Q6P2E9 1401 aaKnown RBP26.94■■□□□ 1.9
SMG8-203ENST00000578922 NME9Q86XW9 330 aa26.94■■□□□ 1.9
SMG8-203ENST00000578922 KIF20BQ96Q89 1820 aa26.93■■□□□ 1.9
SMG8-203ENST00000578922 NKTRP30414 1462 aaKnown RBP26.93■■□□□ 1.9
SMG8-203ENST00000578922 ITSN1Q15811 1721 aa26.92■■□□□ 1.9
SMG8-203ENST00000578922 POLR3AO14802 1390 aaPredicted RBP26.92■■□□□ 1.9
SMG8-203ENST00000578922 BLMP54132 1417 aaPredicted RBP26.92■■□□□ 1.9
SMG8-203ENST00000578922 TOPAZ1Q8N9V7 1692 aa26.92■■□□□ 1.9
SMG8-203ENST00000578922 ZRANB1Q9UGI0 708 aa26.92■■□□□ 1.9
SMG8-203ENST00000578922 PLEKHG3A1L390 1219 aa26.91■■□□□ 1.9
SMG8-203ENST00000578922 ZNF692Q9BU19 519 aaPredicted RBP26.91■■□□□ 1.9
SMG8-203ENST00000578922 ANKRD26Q9UPS8 1709 aa26.9■■□□□ 1.9
SMG8-203ENST00000578922 C14orf37Q86TY3 774 aa26.9■■□□□ 1.9
SMG8-203ENST00000578922 RGPD8O14715 1765 aaPredicted RBP26.89■■□□□ 1.9
SMG8-203ENST00000578922 AKAP12Q02952 1782 aa26.89■■□□□ 1.9
SMG8-203ENST00000578922 MON2Q7Z3U7 1717 aa26.89■■□□□ 1.9
SMG8-203ENST00000578922 FBLN1P23142 703 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms