RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 PIK3C2GO75747 1445 aa17.9■□□□□ 0.46
RBFOX3-201ENST00000578887 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
RBFOX3-201ENST00000578887 E9PSI1 815 aa17.9■□□□□ 0.46
RBFOX3-201ENST00000578887 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
RBFOX3-201ENST00000578887 FAM43AQ8N2R8 423 aa17.9■□□□□ 0.46
RBFOX3-201ENST00000578887 ANTXR1Q9H6X2 564 aa17.9■□□□□ 0.46
RBFOX3-201ENST00000578887 MLH3Q9UHC1 1453 aa17.89■□□□□ 0.46
RBFOX3-201ENST00000578887 RICTORQ6R327 1708 aa17.89■□□□□ 0.45
RBFOX3-201ENST00000578887 TNNT2P45379 298 aaPredicted RBP17.89■□□□□ 0.45
RBFOX3-201ENST00000578887 ABCA6Q8N139 1617 aa17.88■□□□□ 0.45
RBFOX3-201ENST00000578887 CENPJQ9HC77 1338 aaPredicted RBP17.88■□□□□ 0.45
RBFOX3-201ENST00000578887 MROH1Q8NDA8 1641 aa17.88■□□□□ 0.45
RBFOX3-201ENST00000578887 WWC1Q8IX03 1113 aa17.88■□□□□ 0.45
RBFOX3-201ENST00000578887 PPRC1Q5VV67 1664 aaKnown RBP17.88■□□□□ 0.45
RBFOX3-201ENST00000578887 MYOM1P52179 1685 aa17.87■□□□□ 0.45
RBFOX3-201ENST00000578887 MADDQ8WXG6 1647 aa17.86■□□□□ 0.45
RBFOX3-201ENST00000578887 FRMPD1Q5SYB0 1578 aa17.86■□□□□ 0.45
RBFOX3-201ENST00000578887 TBC1D2Q9BYX2 928 aa17.86■□□□□ 0.45
RBFOX3-201ENST00000578887 UBE2Q2Q8WVN8 375 aa17.86■□□□□ 0.45
RBFOX3-201ENST00000578887 IQGAP1P46940 1657 aa17.86■□□□□ 0.45
RBFOX3-201ENST00000578887 CGNL1Q0VF96 1302 aa17.86■□□□□ 0.45
RBFOX3-201ENST00000578887 VIRMAQ69YN4 1812 aaKnown RBP17.85■□□□□ 0.45
RBFOX3-201ENST00000578887 PDE3AQ14432 1141 aa17.85■□□□□ 0.45
RBFOX3-201ENST00000578887 GZF1Q9H116 711 aaPredicted RBP17.85■□□□□ 0.45
RBFOX3-201ENST00000578887 SYNMO15061 1565 aa17.85■□□□□ 0.45
RBFOX3-201ENST00000578887 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
RBFOX3-201ENST00000578887 KIF13AQ9H1H9 1805 aa17.85■□□□□ 0.45
RBFOX3-201ENST00000578887 ATP10AO60312 1499 aa17.84■□□□□ 0.45
RBFOX3-201ENST00000578887 PDIA4P13667 645 aaKnown RBP17.84■□□□□ 0.45
RBFOX3-201ENST00000578887 SCAF11Q99590 1463 aaKnown RBP17.84■□□□□ 0.45
RBFOX3-201ENST00000578887 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
RBFOX3-201ENST00000578887 PANK2Q9BZ23 570 aa17.84■□□□□ 0.45
RBFOX3-201ENST00000578887 PDZRN3Q9UPQ7 1066 aa17.84■□□□□ 0.45
RBFOX3-201ENST00000578887 TET3O43151 1660 aa17.83■□□□□ 0.45
RBFOX3-201ENST00000578887 KANK1Q14678 1352 aa17.82■□□□□ 0.44
RBFOX3-201ENST00000578887 MAPK8IP3Q9UPT6 1336 aa17.82■□□□□ 0.44
RBFOX3-201ENST00000578887 RARSP54136 660 aaKnown RBP17.82■□□□□ 0.44
RBFOX3-201ENST00000578887 BECN1Q14457 450 aa17.82■□□□□ 0.44
RBFOX3-201ENST00000578887 DIP2CQ9Y2E4 1556 aa17.81■□□□□ 0.44
RBFOX3-201ENST00000578887 TBC1D32Q96NH3 1257 aa17.81■□□□□ 0.44
RBFOX3-201ENST00000578887 CDCA8Q53HL2 280 aa17.81■□□□□ 0.44
RBFOX3-201ENST00000578887 YEATS2Q9ULM3 1422 aa17.8■□□□□ 0.44
RBFOX3-201ENST00000578887 CEP152O94986 1710 aa17.8■□□□□ 0.44
RBFOX3-201ENST00000578887 XRCC6P12956 609 aaKnown RBP eCLIP17.8■□□□□ 0.44
RBFOX3-201ENST00000578887 SPHKAPQ2M3C7 1700 aa17.79■□□□□ 0.44
RBFOX3-201ENST00000578887 RSPH6AQ9H0K4 717 aa17.79■□□□□ 0.44
RBFOX3-201ENST00000578887 NPC1L1Q9UHC9 1359 aa17.78■□□□□ 0.44
RBFOX3-201ENST00000578887 GGT6Q6P531 493 aa17.78■□□□□ 0.44
RBFOX3-201ENST00000578887 TCP11L2Q8N4U5 519 aa17.77■□□□□ 0.44
RBFOX3-201ENST00000578887 FBXO3Q9UK99 471 aa17.77■□□□□ 0.44
RBFOX3-201ENST00000578887 ERVK-7P63135 1459 aa17.77■□□□□ 0.43
RBFOX3-201ENST00000578887 ADGRF5Q8IZF2 1346 aa17.76■□□□□ 0.43
RBFOX3-201ENST00000578887 TRPM2O94759 1503 aa17.76■□□□□ 0.43
RBFOX3-201ENST00000578887 EFCAB6Q5THR3 1501 aa17.75■□□□□ 0.43
RBFOX3-201ENST00000578887 CFAP65Q6ZU64 1925 aaKnown RBP17.75■□□□□ 0.43
RBFOX3-201ENST00000578887 PTPRTO14522 1441 aa17.75■□□□□ 0.43
RBFOX3-201ENST00000578887 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
RBFOX3-201ENST00000578887 ZBTB22O15209 634 aa17.73■□□□□ 0.43
RBFOX3-201ENST00000578887 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
RBFOX3-201ENST00000578887 SLC12A5Q9H2X9 1139 aa17.73■□□□□ 0.43
RBFOX3-201ENST00000578887 UGGT1Q9NYU2 1555 aa17.72■□□□□ 0.43
RBFOX3-201ENST00000578887 MCM4P33991 863 aa17.72■□□□□ 0.43
RBFOX3-201ENST00000578887 CHMP4AQ9BY43 222 aa17.72■□□□□ 0.43
RBFOX3-201ENST00000578887 LMTK2Q8IWU2 1503 aa17.72■□□□□ 0.43
RBFOX3-201ENST00000578887 PMFBP1Q8TBY8 1022 aa17.72■□□□□ 0.43
RBFOX3-201ENST00000578887 UPF2Q9HAU5 1272 aaKnown RBP17.72■□□□□ 0.43
RBFOX3-201ENST00000578887 KDM5AP29375 1690 aaKnown RBP17.72■□□□□ 0.43
RBFOX3-201ENST00000578887 FSD2A1L4K1 749 aa17.7■□□□□ 0.42
RBFOX3-201ENST00000578887 L1TD1Q5T7N2 865 aaKnown RBP17.7■□□□□ 0.42
RBFOX3-201ENST00000578887 MORC1Q86VD1 984 aa17.7■□□□□ 0.42
RBFOX3-201ENST00000578887 TSR2Q969E8 191 aaKnown RBP17.7■□□□□ 0.42
RBFOX3-201ENST00000578887 POLR3AO14802 1390 aaPredicted RBP17.7■□□□□ 0.42
RBFOX3-201ENST00000578887 ABCC3O15438 1527 aa17.69■□□□□ 0.42
RBFOX3-201ENST00000578887 GOLGA6L3A6NEY3 463 aa17.69■□□□□ 0.42
RBFOX3-201ENST00000578887 RUNDC1Q96C34 613 aa17.69■□□□□ 0.42
RBFOX3-201ENST00000578887 MTHFSP49914 203 aa17.68■□□□□ 0.42
RBFOX3-201ENST00000578887 NSD3Q9BZ95 1437 aa17.68■□□□□ 0.42
RBFOX3-201ENST00000578887 SHPRHQ149N8 1683 aa17.68■□□□□ 0.42
RBFOX3-201ENST00000578887 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
RBFOX3-201ENST00000578887 C22orf23Q9BZE7 217 aa17.67■□□□□ 0.42
RBFOX3-201ENST00000578887 NPATQ14207 1427 aa17.67■□□□□ 0.42
RBFOX3-201ENST00000578887 TRAK2O60296 914 aa17.66■□□□□ 0.42
RBFOX3-201ENST00000578887 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
RBFOX3-201ENST00000578887 RWDD1Q9H446 243 aaPredicted RBP17.66■□□□□ 0.42
RBFOX3-201ENST00000578887 CAMSAP1Q5T5Y3 1602 aa17.66■□□□□ 0.42
RBFOX3-201ENST00000578887 MVPQ14764 893 aaKnown RBP17.65■□□□□ 0.42
RBFOX3-201ENST00000578887 IQSEC2Q5JU85 1478 aa17.65■□□□□ 0.42
RBFOX3-201ENST00000578887 NAP1L5Q96NT1 182 aaPredicted RBP17.64■□□□□ 0.41
RBFOX3-201ENST00000578887 SIGLEC1Q9BZZ2 1709 aa17.64■□□□□ 0.41
RBFOX3-201ENST00000578887 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
RBFOX3-201ENST00000578887 KIF1BO60333 1816 aa17.63■□□□□ 0.41
RBFOX3-201ENST00000578887 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
RBFOX3-201ENST00000578887 NGEFQ8N5V2 710 aa17.63■□□□□ 0.41
RBFOX3-201ENST00000578887 ERBB4Q15303 1308 aa17.62■□□□□ 0.41
RBFOX3-201ENST00000578887 MROH2AA6NES4 1674 aa17.62■□□□□ 0.41
RBFOX3-201ENST00000578887 FTSJ3Q8IY81 847 aaKnown RBP17.62■□□□□ 0.41
RBFOX3-201ENST00000578887 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
RBFOX3-201ENST00000578887 TRIM27P14373 513 aa17.61■□□□□ 0.41
RBFOX3-201ENST00000578887 WDR63Q8IWG1 891 aa17.61■□□□□ 0.41
RBFOX3-201ENST00000578887 DHX37Q8IY37 1157 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms