RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.91□□□□□ -0.82
PTPRM-207ENST00000578571 RNF19BQ6ZMZ0 732 aa9.9□□□□□ -0.82
PTPRM-207ENST00000578571 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.82
PTPRM-207ENST00000578571 TLL1O43897 1013 aa9.89□□□□□ -0.83
PTPRM-207ENST00000578571 QPCTQ16769 361 aa9.89□□□□□ -0.83
PTPRM-207ENST00000578571 CSPP1Q1MSJ5 1256 aa9.89□□□□□ -0.83
PTPRM-207ENST00000578571 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
PTPRM-207ENST00000578571 BRICD5Q6PL45 260 aa9.89□□□□□ -0.83
PTPRM-207ENST00000578571 SYMPKQ92797 1274 aaKnown RBP9.89□□□□□ -0.83
PTPRM-207ENST00000578571 PCMTD1Q96MG8 357 aaPredicted RBP9.89□□□□□ -0.83
PTPRM-207ENST00000578571 Q3C1V9 767 aa9.88□□□□□ -0.83
PTPRM-207ENST00000578571 CABLES1Q8TDN4 633 aa9.88□□□□□ -0.83
PTPRM-207ENST00000578571 LILRB3O75022 631 aa9.87□□□□□ -0.83
PTPRM-207ENST00000578571 HRCP23327 699 aa9.87□□□□□ -0.83
PTPRM-207ENST00000578571 PRPF38BQ5VTL8 546 aaKnown RBP9.87□□□□□ -0.83
PTPRM-207ENST00000578571 FMNL1O95466 1100 aaPredicted RBP9.86□□□□□ -0.83
PTPRM-207ENST00000578571 KCNC4Q03721 635 aa9.86□□□□□ -0.83
PTPRM-207ENST00000578571 NKX2-3Q8TAU0 364 aa9.86□□□□□ -0.83
PTPRM-207ENST00000578571 C6orf229H3BNL8 230 aa9.85□□□□□ -0.83
PTPRM-207ENST00000578571 MTMR2Q13614 643 aa9.85□□□□□ -0.83
PTPRM-207ENST00000578571 SPSB2Q99619 263 aa9.85□□□□□ -0.83
PTPRM-207ENST00000578571 ZBTB3Q9H5J0 574 aa9.85□□□□□ -0.83
PTPRM-207ENST00000578571 ADH1BP00325 375 aa9.84□□□□□ -0.83
PTPRM-207ENST00000578571 RTL5Q5HYW3 569 aaPredicted RBP9.84□□□□□ -0.83
PTPRM-207ENST00000578571 PPP2R2DQ66LE6 453 aa9.84□□□□□ -0.83
PTPRM-207ENST00000578571 FAM160A2Q8N612 972 aaPredicted RBP9.84□□□□□ -0.83
PTPRM-207ENST00000578571 RETREG3Q86VR2 466 aa9.83□□□□□ -0.84
PTPRM-207ENST00000578571 USB1Q9BQ65 265 aaKnown RBP9.83□□□□□ -0.84
PTPRM-207ENST00000578571 ATP1B4Q9UN42 357 aaPredicted RBP9.83□□□□□ -0.84
PTPRM-207ENST00000578571 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
PTPRM-207ENST00000578571 NUTM2BA6NNL0 878 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-207ENST00000578571 NUTM2EB1AL46 878 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-207ENST00000578571 CFAP99D6REC4 459 aa9.81□□□□□ -0.84
PTPRM-207ENST00000578571 MSS51Q4VC12 460 aa9.81□□□□□ -0.84
PTPRM-207ENST00000578571 IFFO2Q5TF58 517 aa9.81□□□□□ -0.84
PTPRM-207ENST00000578571 NUTM2DQ5VT03 806 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-207ENST00000578571 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-207ENST00000578571 PRR7Q8TB68 274 aa9.8□□□□□ -0.84
PTPRM-207ENST00000578571 PRDM9Q9NQV7 894 aa9.8□□□□□ -0.84
PTPRM-207ENST00000578571 PLA2G2EQ9NZK7 142 aa9.8□□□□□ -0.84
PTPRM-207ENST00000578571 RFC5P40937 340 aa9.79□□□□□ -0.84
PTPRM-207ENST00000578571 SLC6A16Q9GZN6 736 aa9.78□□□□□ -0.84
PTPRM-207ENST00000578571 S1PR4O95977 384 aa9.77□□□□□ -0.85
PTPRM-207ENST00000578571 DXOO77932 396 aaKnown RBP9.76□□□□□ -0.85
PTPRM-207ENST00000578571 MMP16P51512 607 aa9.76□□□□□ -0.85
PTPRM-207ENST00000578571 JUNDP17535 347 aa9.75□□□□□ -0.85
PTPRM-207ENST00000578571 DESI1Q6ICB0 168 aa9.75□□□□□ -0.85
PTPRM-207ENST00000578571 PPP1R18Q6NYC8 613 aa9.73□□□□□ -0.85
PTPRM-207ENST00000578571 ABCC9O60706 1549 aa9.72□□□□□ -0.85
PTPRM-207ENST00000578571 CTDSPL2Q05D32 466 aa9.72□□□□□ -0.85
PTPRM-207ENST00000578571 TSC1Q92574 1164 aa9.72□□□□□ -0.85
PTPRM-207ENST00000578571 A0A0G2JS52 829 aa9.71□□□□□ -0.86
PTPRM-207ENST00000578571 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
PTPRM-207ENST00000578571 PPEF1O14829 653 aaPredicted RBP9.71□□□□□ -0.86
PTPRM-207ENST00000578571 PER1O15534 1290 aaPredicted RBP9.71□□□□□ -0.86
PTPRM-207ENST00000578571 AP1G2O75843 785 aa9.71□□□□□ -0.86
PTPRM-207ENST00000578571 TMEM259Q4ZIN3 620 aa9.71□□□□□ -0.86
PTPRM-207ENST00000578571 LYPD8Q6UX82 237 aa9.71□□□□□ -0.86
PTPRM-207ENST00000578571 HELBQ8NG08 1087 aaPredicted RBP9.71□□□□□ -0.86
PTPRM-207ENST00000578571 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.7□□□□□ -0.86
PTPRM-207ENST00000578571 USP17L8P0C7I0 530 aa9.69□□□□□ -0.86
PTPRM-207ENST00000578571 PTPRNQ16849 979 aa9.69□□□□□ -0.86
PTPRM-207ENST00000578571 GGCXP38435 758 aa9.68□□□□□ -0.86
PTPRM-207ENST00000578571 BANK1Q8NDB2 785 aa9.68□□□□□ -0.86
PTPRM-207ENST00000578571 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
PTPRM-207ENST00000578571 FCF1Q9Y324 198 aaKnown RBP9.68□□□□□ -0.86
PTPRM-207ENST00000578571 ANKLE1Q8NAG6 615 aa9.67□□□□□ -0.86
PTPRM-207ENST00000578571 NUDT12Q9BQG2 462 aa9.67□□□□□ -0.86
PTPRM-207ENST00000578571 F12P00748 615 aaPredicted RBP9.66□□□□□ -0.86
PTPRM-207ENST00000578571 CCNYL3P0C7X3 344 aa9.66□□□□□ -0.86
PTPRM-207ENST00000578571 PLA2G2CQ5R387 149 aa9.66□□□□□ -0.86
PTPRM-207ENST00000578571 HMX1Q9NP08 348 aaPredicted RBP9.65□□□□□ -0.86
PTPRM-207ENST00000578571 SNRKQ9NRH2 765 aa9.65□□□□□ -0.86
PTPRM-207ENST00000578571 EMID1Q96A84 441 aaPredicted RBP9.64□□□□□ -0.87
PTPRM-207ENST00000578571 EVA1BQ9NVM1 165 aa9.64□□□□□ -0.87
PTPRM-207ENST00000578571 PTCRAQ6ISU1 281 aaPredicted RBP9.63□□□□□ -0.87
PTPRM-207ENST00000578571 CCDC24Q8N4L8 307 aa9.63□□□□□ -0.87
PTPRM-207ENST00000578571 MTMR14Q8NCE2 650 aa9.63□□□□□ -0.87
PTPRM-207ENST00000578571 MAP10Q9P2G4 905 aa9.63□□□□□ -0.87
PTPRM-207ENST00000578571 GTF3C3Q9Y5Q9 886 aa9.63□□□□□ -0.87
PTPRM-207ENST00000578571 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
PTPRM-207ENST00000578571 MCM6Q14566 821 aa9.62□□□□□ -0.87
PTPRM-207ENST00000578571 EPS8L1Q8TE68 723 aa9.61□□□□□ -0.87
PTPRM-207ENST00000578571 GJD4Q96KN9 370 aaPredicted RBP9.61□□□□□ -0.87
PTPRM-207ENST00000578571 TRIM34Q9BYJ4 488 aa9.61□□□□□ -0.87
PTPRM-207ENST00000578571 SOCS7O14512 581 aa9.6□□□□□ -0.87
PTPRM-207ENST00000578571 CTHP32929 405 aa9.6□□□□□ -0.87
PTPRM-207ENST00000578571 NR6A1Q15406 480 aa9.6□□□□□ -0.87
PTPRM-207ENST00000578571 ZCCHC6Q5VYS8 1495 aaKnown RBP9.59□□□□□ -0.87
PTPRM-207ENST00000578571 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
PTPRM-207ENST00000578571 FLIIQ13045 1269 aa9.58□□□□□ -0.88
PTPRM-207ENST00000578571 UNC93B1Q9H1C4 597 aa9.58□□□□□ -0.88
PTPRM-207ENST00000578571 RPIAP49247 311 aa9.56□□□□□ -0.88
PTPRM-207ENST00000578571 GPR37L1O60883 481 aa9.55□□□□□ -0.88
PTPRM-207ENST00000578571 SLC19A1P41440 591 aa9.54□□□□□ -0.88
PTPRM-207ENST00000578571 TRIM32Q13049 653 aa9.54□□□□□ -0.88
PTPRM-207ENST00000578571 PRKD2Q9BZL6 878 aa9.54□□□□□ -0.88
PTPRM-207ENST00000578571 DCAF1Q9Y4B6 1507 aa9.54□□□□□ -0.88
PTPRM-207ENST00000578571 MYO15BQ96JP2 1530 aa9.53□□□□□ -0.88
PTPRM-207ENST00000578571 ZBTB24O43167 697 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms