RNA–Protein interactions for RNA: ENST00000578431.1

EPB41L3-210, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 2

Gene EPB41L3, Length 570 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-210	ENST00000578431	WAPL	Q7Z5K2	1190 aa		41.13	■■■■■ 4.17
EPB41L3-210	ENST00000578431	TRAK1	Q9UPV9	953 aa		41.12	■■■■■ 4.17
EPB41L3-210	ENST00000578431	ATF3	P18847	181 aa		41.1	■■■■■ 4.17
EPB41L3-210	ENST00000578431	ADGRB2	O60241	1585 aa		41.1	■■■■■ 4.17
EPB41L3-210	ENST00000578431	ROCK2	O75116	1388 aa	Known RBP	41.1	■■■■■ 4.17
EPB41L3-210	ENST00000578431	ILDR1	Q86SU0	546 aa	Predicted RBP	41.09	■■■■■ 4.17
EPB41L3-210	ENST00000578431	PRAM1	Q96QH2	718 aa		41.09	■■■■■ 4.17
EPB41L3-210	ENST00000578431	MST1R	Q04912	1400 aa		41.05	■■■■■ 4.16
EPB41L3-210	ENST00000578431	ROBO1	Q9Y6N7	1651 aa		41.04	■■■■■ 4.16
EPB41L3-210	ENST00000578431	SLAIN2	Q9P270	581 aa		41.03	■■■■■ 4.16
EPB41L3-210	ENST00000578431	PIP4K2B	P78356	416 aa		41.02	■■■■■ 4.16
EPB41L3-210	ENST00000578431	POGK	Q9P215	609 aa		41.02	■■■■■ 4.16
EPB41L3-210	ENST00000578431	FMN2	Q9NZ56	1722 aa		41.01	■■■■■ 4.16
EPB41L3-210	ENST00000578431	SCAF1	Q9H7N4	1312 aa	Known RBP	40.96	■■■■■ 4.15
EPB41L3-210	ENST00000578431	QRICH2	Q9H0J4	1663 aa		40.94	■■■■■ 4.14
EPB41L3-210	ENST00000578431	C1orf167	Q5SNV9	1468 aa		40.93	■■■■■ 4.14
EPB41L3-210	ENST00000578431	EIF3A	Q14152	1382 aa	Known RBP	40.92	■■■■■ 4.14
EPB41L3-210	ENST00000578431	SAFB2	Q14151	953 aa	Known RBP eCLIP	40.92	■■■■■ 4.14
EPB41L3-210	ENST00000578431	CARD11	Q9BXL7	1154 aa		40.89	■■■■■ 4.14
EPB41L3-210	ENST00000578431	CENPJ	Q9HC77	1338 aa	Predicted RBP	40.88	■■■■■ 4.13
EPB41L3-210	ENST00000578431	AHDC1	Q5TGY3	1603 aa	Predicted RBP	40.84	■■■■■ 4.13
EPB41L3-210	ENST00000578431	MINK1	Q8N4C8	1332 aa	Predicted RBP	40.84	■■■■■ 4.13
EPB41L3-210	ENST00000578431	NHSL1	Q5SYE7	1610 aa		40.82	■■■■■ 4.13
EPB41L3-210	ENST00000578431	BRINP3	Q76B58	766 aa		40.82	■■■■■ 4.13
EPB41L3-210	ENST00000578431	ANKAR	Q7Z5J8	1434 aa		40.82	■■■■■ 4.12
EPB41L3-210	ENST00000578431	TULP4	Q9NRJ4	1543 aa		40.81	■■■■■ 4.12
EPB41L3-210	ENST00000578431	USP32	Q8NFA0	1604 aa		40.81	■■■■■ 4.12
EPB41L3-210	ENST00000578431	HIRIP3	Q9BW71	556 aa	Predicted RBP	40.78	■■■■■ 4.12
EPB41L3-210	ENST00000578431	SBNO2	Q9Y2G9	1366 aa		40.77	■■■■■ 4.12
EPB41L3-210	ENST00000578431	WASL	O00401	505 aa	Predicted RBP	40.77	■■■■■ 4.12
EPB41L3-210	ENST00000578431	KIF1A	Q12756	1690 aa		40.77	■■■■■ 4.12
EPB41L3-210	ENST00000578431	PHLPP1	O60346	1717 aa		40.76	■■■■■ 4.12
EPB41L3-210	ENST00000578431	HSPA1L	P34931	641 aa		40.76	■■■■■ 4.12
EPB41L3-210	ENST00000578431	RGPD8	O14715	1765 aa	Predicted RBP	40.76	■■■■■ 4.12
EPB41L3-210	ENST00000578431	COL16A1	Q07092	1604 aa	Predicted RBP	40.72	■■■■■ 4.11
EPB41L3-210	ENST00000578431	ITSN1	Q15811	1721 aa		40.71	■■■■■ 4.11
EPB41L3-210	ENST00000578431	ORAI2	Q96SN7	254 aa		40.69	■■■■■ 4.1
EPB41L3-210	ENST00000578431	ATP7B	P35670	1465 aa		40.69	■■■■■ 4.1
EPB41L3-210	ENST00000578431	TOPAZ1	Q8N9V7	1692 aa		40.67	■■■■■ 4.1
EPB41L3-210	ENST00000578431	NUTM2F	A1L443	756 aa		40.67	■■■■■ 4.1
EPB41L3-210	ENST00000578431	USP47	Q96K76	1375 aa		40.65	■■■■■ 4.1
EPB41L3-210	ENST00000578431	ESCO1	Q5FWF5	840 aa		40.65	■■■■■ 4.1
EPB41L3-210	ENST00000578431	PRR36	Q9H6K5	1346 aa		40.64	■■■■■ 4.1
EPB41L3-210	ENST00000578431	CDK19	Q9BWU1	502 aa		40.63	■■■■■ 4.09
EPB41L3-210	ENST00000578431	EVC2	Q86UK5	1308 aa		40.59	■■■■■ 4.09
EPB41L3-210	ENST00000578431	NPHP3	Q7Z494	1330 aa		40.57	■■■■■ 4.08
EPB41L3-210	ENST00000578431	PHF8	Q9UPP1	1060 aa		40.56	■■■■■ 4.08
EPB41L3-210	ENST00000578431	NUDT16	Q96DE0	195 aa	Known RBP	40.55	■■■■■ 4.08
EPB41L3-210	ENST00000578431	PXDN	Q92626	1479 aa		40.55	■■■■■ 4.08
EPB41L3-210	ENST00000578431	SOS2	Q07890	1332 aa	Predicted RBP	40.53	■■■■■ 4.08
EPB41L3-210	ENST00000578431	ST20-MTHFS	A0A0A6YYL1	179 aa		40.53	■■■■■ 4.08
EPB41L3-210	ENST00000578431	TESK2	Q96S53	571 aa		40.52	■■■■■ 4.08
EPB41L3-210	ENST00000578431	SHPRH	Q149N8	1683 aa		40.52	■■■■■ 4.08
EPB41L3-210	ENST00000578431	SLC24A1	O60721	1099 aa		40.51	■■■■■ 4.08
EPB41L3-210	ENST00000578431	SRPK2	P78362	688 aa	Known RBP	40.51	■■■■■ 4.08
EPB41L3-210	ENST00000578431	DDX17	Q92841	729 aa	Known RBP	40.49	■■■■■ 4.07
EPB41L3-210	ENST00000578431	CCDC61	Q9Y6R9	512 aa		40.49	■■■■■ 4.07
EPB41L3-210	ENST00000578431	JCAD	Q9P266	1359 aa		40.48	■■■■■ 4.07
EPB41L3-210	ENST00000578431	FOXO3	O43524	673 aa		40.47	■■■■■ 4.07
EPB41L3-210	ENST00000578431	CABP2	Q9NPB3	220 aa		40.47	■■■■■ 4.07
EPB41L3-210	ENST00000578431	ATAD2	Q6PL18	1390 aa		40.44	■■■■■ 4.06
EPB41L3-210	ENST00000578431	LRRC59	Q96AG4	307 aa	Known RBP	40.43	■■■■■ 4.06
EPB41L3-210	ENST00000578431	PPIP5K1	Q6PFW1	1433 aa		40.42	■■■■■ 4.06
EPB41L3-210	ENST00000578431	POLR3A	O14802	1390 aa	Predicted RBP	40.42	■■■■■ 4.06
EPB41L3-210	ENST00000578431	PLEKHG3	A1L390	1219 aa		40.41	■■■■■ 4.06
EPB41L3-210	ENST00000578431	PMFBP1	Q8TBY8	1022 aa		40.41	■■■■■ 4.06
EPB41L3-210	ENST00000578431	PUS7	Q96PZ0	661 aa	Known RBP	40.41	■■■■■ 4.06
EPB41L3-210	ENST00000578431	TRPM3	Q9HCF6	1732 aa	Predicted RBP	40.39	■■■■■ 4.06
EPB41L3-210	ENST00000578431	EIF4G2	P78344	907 aa	Known RBP eCLIP	40.37	■■■■■ 4.05
EPB41L3-210	ENST00000578431	COL22A1	Q8NFW1	1626 aa	Predicted RBP	40.37	■■■■■ 4.05
EPB41L3-210	ENST00000578431	SBNO1	A3KN83	1393 aa		40.35	■■■■■ 4.05
EPB41L3-210	ENST00000578431	KRT28	Q7Z3Y7	464 aa		40.34	■■■■■ 4.05
EPB41L3-210	ENST00000578431	PNPLA6	Q8IY17	1366 aa		40.34	■■■■■ 4.05
EPB41L3-210	ENST00000578431	PSME1	Q06323	249 aa		40.33	■■■■■ 4.05
EPB41L3-210	ENST00000578431	NGDN	Q8NEJ9	315 aa	Known RBP	40.33	■■■■■ 4.05
EPB41L3-210	ENST00000578431	TMF1	P82094	1093 aa		40.32	■■■■■ 4.05
EPB41L3-210	ENST00000578431	XPC	Q01831	940 aa	Predicted RBP	40.32	■■■■■ 4.05
EPB41L3-210	ENST00000578431	DISP3	Q9P2K9	1392 aa		40.32	■■■■■ 4.04
EPB41L3-210	ENST00000578431	TNS3	Q68CZ2	1445 aa		40.31	■■■■■ 4.04
EPB41L3-210	ENST00000578431	ACE	P12821	1306 aa		40.3	■■■■■ 4.04
EPB41L3-210	ENST00000578431	SPATA31A6	Q5VVP1	1343 aa		40.3	■■■■■ 4.04
EPB41L3-210	ENST00000578431	AKAP12	Q02952	1782 aa		40.29	■■■■■ 4.04
EPB41L3-210	ENST00000578431	SPATA31A3	Q5VYP0	1347 aa		40.29	■■■■■ 4.04
EPB41L3-210	ENST00000578431	ALS2	Q96Q42	1657 aa		40.29	■■■■■ 4.04
EPB41L3-210	ENST00000578431	MED1	Q15648	1581 aa	Predicted RBP	40.28	■■■■■ 4.04
EPB41L3-210	ENST00000578431	HSPA5	P11021	654 aa	Known RBP	40.28	■■■■■ 4.04
EPB41L3-210	ENST00000578431	CABP1	Q9NZU7	370 aa		40.27	■■■■■ 4.04
EPB41L3-210	ENST00000578431	NINL	Q9Y2I6	1382 aa		40.25	■■■■■ 4.03
EPB41L3-210	ENST00000578431	BRD4	O60885	1362 aa	Predicted RBP	40.24	■■■■■ 4.03
EPB41L3-210	ENST00000578431	CDCA8	Q53HL2	280 aa		40.23	■■■■■ 4.03
EPB41L3-210	ENST00000578431	ARHGEF10	O15013	1369 aa		40.22	■■■■■ 4.03
EPB41L3-210	ENST00000578431	CPSF1	Q10570	1443 aa	Known RBP	40.21	■■■■■ 4.03
EPB41L3-210	ENST00000578431	MON2	Q7Z3U7	1717 aa		40.21	■■■■■ 4.03
EPB41L3-210	ENST00000578431	USP6	P35125	1406 aa		40.2	■■■■■ 4.03
EPB41L3-210	ENST00000578431	NRK	Q7Z2Y5	1582 aa		40.18	■■■■■ 4.02
EPB41L3-210	ENST00000578431	LRP6	O75581	1613 aa		40.18	■■■■■ 4.02
EPB41L3-210	ENST00000578431	CD163L1	Q9NR16	1453 aa		40.18	■■■■■ 4.02
EPB41L3-210	ENST00000578431	SSH2	Q76I76	1423 aa		40.15	■■■■■ 4.02
EPB41L3-210	ENST00000578431	MYOM1	P52179	1685 aa		40.15	■■■■■ 4.02
EPB41L3-210	ENST00000578431	ABCA3	Q99758	1704 aa		40.14	■■■■■ 4.02

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms