RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 NBPF8Q3BBV2 869 aa15.93■□□□□ 0.14
TRAPPC8-204ENST00000578252 C14orf93Q9H972 538 aaKnown RBP15.93■□□□□ 0.14
TRAPPC8-204ENST00000578252 ADAMTS13Q76LX8 1427 aa15.93■□□□□ 0.14
TRAPPC8-204ENST00000578252 SP7Q8TDD2 431 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC8-204ENST00000578252 TBX22Q9Y458 520 aa15.91■□□□□ 0.14
TRAPPC8-204ENST00000578252 ROCK2O75116 1388 aaKnown RBP15.9■□□□□ 0.14
TRAPPC8-204ENST00000578252 GPRASP1Q5JY77 1395 aa15.9■□□□□ 0.14
TRAPPC8-204ENST00000578252 PIK3R4Q99570 1358 aa15.9■□□□□ 0.14
TRAPPC8-204ENST00000578252 CFAP70Q5T0N1 1121 aa15.9■□□□□ 0.14
TRAPPC8-204ENST00000578252 ADGRB1O14514 1584 aa15.9■□□□□ 0.14
TRAPPC8-204ENST00000578252 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
TRAPPC8-204ENST00000578252 ASXL1Q8IXJ9 1541 aa15.89■□□□□ 0.13
TRAPPC8-204ENST00000578252 EVX2Q03828 476 aa15.88■□□□□ 0.13
TRAPPC8-204ENST00000578252 FARP1Q9Y4F1 1045 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC8-204ENST00000578252 KNDC1Q76NI1 1749 aa15.88■□□□□ 0.13
TRAPPC8-204ENST00000578252 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
TRAPPC8-204ENST00000578252 CHD2O14647 1828 aaKnown RBP15.87■□□□□ 0.13
TRAPPC8-204ENST00000578252 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
TRAPPC8-204ENST00000578252 CARD11Q9BXL7 1154 aa15.85■□□□□ 0.13
TRAPPC8-204ENST00000578252 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
TRAPPC8-204ENST00000578252 NWD1Q149M9 1564 aa15.84■□□□□ 0.13
TRAPPC8-204ENST00000578252 NBPF1Q3BBV0 1214 aa15.84■□□□□ 0.13
TRAPPC8-204ENST00000578252 XRN1Q8IZH2 1706 aaKnown RBP15.84■□□□□ 0.13
TRAPPC8-204ENST00000578252 METP08581 1390 aa15.84■□□□□ 0.13
TRAPPC8-204ENST00000578252 LRPPRCP42704 1394 aaKnown RBP15.84■□□□□ 0.13
TRAPPC8-204ENST00000578252 EIF3AQ14152 1382 aaKnown RBP15.83■□□□□ 0.12
TRAPPC8-204ENST00000578252 TECPR2O15040 1411 aa15.83■□□□□ 0.12
TRAPPC8-204ENST00000578252 CPS1P31327 1500 aa15.83■□□□□ 0.12
TRAPPC8-204ENST00000578252 DLC1Q96QB1 1528 aa15.83■□□□□ 0.12
TRAPPC8-204ENST00000578252 ABCC11Q96J66 1382 aa15.82■□□□□ 0.12
TRAPPC8-204ENST00000578252 ARHGEF28Q8N1W1 1705 aaKnown RBP15.82■□□□□ 0.12
TRAPPC8-204ENST00000578252 TMEM132EQ6IEE7 984 aa15.81■□□□□ 0.12
TRAPPC8-204ENST00000578252 NKTRP30414 1462 aaKnown RBP15.8■□□□□ 0.12
TRAPPC8-204ENST00000578252 PTCH1Q13635 1447 aa15.8■□□□□ 0.12
TRAPPC8-204ENST00000578252 PTPRUQ92729 1446 aa15.79■□□□□ 0.12
TRAPPC8-204ENST00000578252 USP47Q96K76 1375 aa15.79■□□□□ 0.12
TRAPPC8-204ENST00000578252 FAM135BQ49AJ0 1406 aa15.78■□□□□ 0.12
TRAPPC8-204ENST00000578252 KCNA6P17658 529 aa15.78■□□□□ 0.12
TRAPPC8-204ENST00000578252 SIRT1Q96EB6 747 aa15.78■□□□□ 0.12
TRAPPC8-204ENST00000578252 AMOTL2Q9Y2J4 779 aa15.78■□□□□ 0.12
TRAPPC8-204ENST00000578252 EIF4G2P78344 907 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRAPPC8-204ENST00000578252 STK26Q9P289 416 aa15.76■□□□□ 0.11
TRAPPC8-204ENST00000578252 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
TRAPPC8-204ENST00000578252 QRICH2Q9H0J4 1663 aa15.76■□□□□ 0.11
TRAPPC8-204ENST00000578252 STRCP1A6NGW2 1772 aa15.75■□□□□ 0.11
TRAPPC8-204ENST00000578252 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
TRAPPC8-204ENST00000578252 CENPJQ9HC77 1338 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC8-204ENST00000578252 ROBO2Q9HCK4 1378 aa15.73■□□□□ 0.11
TRAPPC8-204ENST00000578252 SBNO2Q9Y2G9 1366 aa15.73■□□□□ 0.11
TRAPPC8-204ENST00000578252 POGKQ9P215 609 aa15.72■□□□□ 0.11
TRAPPC8-204ENST00000578252 NCOA3Q9Y6Q9 1424 aa15.71■□□□□ 0.11
TRAPPC8-204ENST00000578252 HSPA5P11021 654 aaKnown RBP15.71■□□□□ 0.11
TRAPPC8-204ENST00000578252 CD44P16070 742 aaKnown RBP15.71■□□□□ 0.11
TRAPPC8-204ENST00000578252 PRAM1Q96QH2 718 aa15.71■□□□□ 0.11
TRAPPC8-204ENST00000578252 ZNF335Q9H4Z2 1342 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC8-204ENST00000578252 ADGRB2O60241 1585 aa15.7■□□□□ 0.1
TRAPPC8-204ENST00000578252 ST20-MTHFSA0A0A6YYL1 179 aa15.69■□□□□ 0.1
TRAPPC8-204ENST00000578252 PROSER2Q86WR7 435 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC8-204ENST00000578252 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC8-204ENST00000578252 PLEKHH1Q9ULM0 1364 aa15.67■□□□□ 0.1
TRAPPC8-204ENST00000578252 WAPLQ7Z5K2 1190 aa15.67■□□□□ 0.1
TRAPPC8-204ENST00000578252 NALCNQ8IZF0 1738 aa15.67■□□□□ 0.1
TRAPPC8-204ENST00000578252 LTBP4Q8N2S1 1624 aa15.67■□□□□ 0.1
TRAPPC8-204ENST00000578252 LRRC7Q96NW7 1537 aa15.67■□□□□ 0.1
TRAPPC8-204ENST00000578252 ADGRL3Q9HAR2 1447 aa15.66■□□□□ 0.1
TRAPPC8-204ENST00000578252 XIRP1Q702N8 1843 aaKnown RBP15.66■□□□□ 0.1
TRAPPC8-204ENST00000578252 CDC42BPGQ6DT37 1551 aa15.66■□□□□ 0.1
TRAPPC8-204ENST00000578252 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC8-204ENST00000578252 TESK2Q96S53 571 aa15.65■□□□□ 0.1
TRAPPC8-204ENST00000578252 TMEM94Q12767 1356 aa15.64■□□□□ 0.09
TRAPPC8-204ENST00000578252 TMF1P82094 1093 aa15.64■□□□□ 0.09
TRAPPC8-204ENST00000578252 SAFB2Q14151 953 aaKnown RBP eCLIP15.64■□□□□ 0.09
TRAPPC8-204ENST00000578252 DCCP43146 1447 aa15.63■□□□□ 0.09
TRAPPC8-204ENST00000578252 CDCA8Q53HL2 280 aa15.63■□□□□ 0.09
TRAPPC8-204ENST00000578252 EVC2Q86UK5 1308 aa15.63■□□□□ 0.09
TRAPPC8-204ENST00000578252 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC8-204ENST00000578252 TULP4Q9NRJ4 1543 aa15.63■□□□□ 0.09
TRAPPC8-204ENST00000578252 C14orf37Q86TY3 774 aa15.62■□□□□ 0.09
TRAPPC8-204ENST00000578252 MSH6P52701 1360 aa15.62■□□□□ 0.09
TRAPPC8-204ENST00000578252 FMN2Q9NZ56 1722 aa15.61■□□□□ 0.09
TRAPPC8-204ENST00000578252 PUS7Q96PZ0 661 aaKnown RBP15.61■□□□□ 0.09
TRAPPC8-204ENST00000578252 IQSEC2Q5JU85 1478 aa15.6■□□□□ 0.09
TRAPPC8-204ENST00000578252 C19orf44Q9H6X5 657 aa15.6■□□□□ 0.09
TRAPPC8-204ENST00000578252 WASLO00401 505 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC8-204ENST00000578252 HIRIP3Q9BW71 556 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC8-204ENST00000578252 ITSN1Q15811 1721 aa15.58■□□□□ 0.08
TRAPPC8-204ENST00000578252 MIER1Q8N108 512 aa15.58■□□□□ 0.08
TRAPPC8-204ENST00000578252 DISP3Q9P2K9 1392 aa15.58■□□□□ 0.08
TRAPPC8-204ENST00000578252 ANKARQ7Z5J8 1434 aa15.58■□□□□ 0.08
TRAPPC8-204ENST00000578252 ZNF316A6NFI3 1004 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC8-204ENST00000578252 SRPK2P78362 688 aaKnown RBP15.56■□□□□ 0.08
TRAPPC8-204ENST00000578252 CADPS2Q86UW7 1296 aa15.56■□□□□ 0.08
TRAPPC8-204ENST00000578252 RBM33Q96EV2 1170 aaKnown RBP15.56■□□□□ 0.08
TRAPPC8-204ENST00000578252 CDK19Q9BWU1 502 aa15.56■□□□□ 0.08
TRAPPC8-204ENST00000578252 ATAD2Q6PL18 1390 aa15.56■□□□□ 0.08
TRAPPC8-204ENST00000578252 TOPAZ1Q8N9V7 1692 aa15.55■□□□□ 0.08
TRAPPC8-204ENST00000578252 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
TRAPPC8-204ENST00000578252 ATF3P18847 181 aa15.55■□□□□ 0.08
TRAPPC8-204ENST00000578252 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
TRAPPC8-204ENST00000578252 ATP7BP35670 1465 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms