RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 HDGFP51858 240 aaKnown RBP8.07□□□□□ -1.12
KRT39-202ENST00000578029 PROX2Q3B8N5 592 aa8.07□□□□□ -1.12
KRT39-202ENST00000578029 TSC1Q92574 1164 aa8.07□□□□□ -1.12
KRT39-202ENST00000578029 HMX1Q9NP08 348 aaPredicted RBP8.07□□□□□ -1.12
KRT39-202ENST00000578029 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.06□□□□□ -1.12
KRT39-202ENST00000578029 BRD1O95696 1058 aa8.06□□□□□ -1.12
KRT39-202ENST00000578029 MFAP1P55081 439 aaKnown RBP8.06□□□□□ -1.12
KRT39-202ENST00000578029 GUCA2AQ02747 115 aa8.06□□□□□ -1.12
KRT39-202ENST00000578029 VAC14Q08AM6 782 aa8.06□□□□□ -1.12
KRT39-202ENST00000578029 KCNA1Q09470 495 aa8.06□□□□□ -1.12
KRT39-202ENST00000578029 CFAP70Q5T0N1 1121 aa8.06□□□□□ -1.12
KRT39-202ENST00000578029 PPP1R12CQ9BZL4 782 aa8.06□□□□□ -1.12
KRT39-202ENST00000578029 KIAA1468Q9P260 1216 aa8.06□□□□□ -1.12
KRT39-202ENST00000578029 SLC10A3P09131 477 aa8.05□□□□□ -1.12
KRT39-202ENST00000578029 SOX11P35716 441 aa8.05□□□□□ -1.12
KRT39-202ENST00000578029 SWT1Q5T5J6 900 aaKnown RBP8.05□□□□□ -1.12
KRT39-202ENST00000578029 RGS22Q8NE09 1264 aa8.05□□□□□ -1.12
KRT39-202ENST00000578029 KCNK17Q96T54 332 aa8.05□□□□□ -1.12
KRT39-202ENST00000578029 ALG2Q9H553 416 aa8.05□□□□□ -1.12
KRT39-202ENST00000578029 C6orf229H3BNL8 230 aa8.04□□□□□ -1.12
KRT39-202ENST00000578029 PALM3A6NDB9 673 aaPredicted RBP8.03□□□□□ -1.12
KRT39-202ENST00000578029 GPR37L1O60883 481 aa8.03□□□□□ -1.12
KRT39-202ENST00000578029 SRPK2P78362 688 aaKnown RBP8.03□□□□□ -1.12
KRT39-202ENST00000578029 LRRN4Q8WUT4 740 aa8.03□□□□□ -1.12
KRT39-202ENST00000578029 HLA-CQ95604 372 aa8.03□□□□□ -1.12
KRT39-202ENST00000578029 CFAP99D6REC4 459 aa8.02□□□□□ -1.13
KRT39-202ENST00000578029 LMOD1P29536 600 aaPredicted RBP8.02□□□□□ -1.13
KRT39-202ENST00000578029 PNMA1Q8ND90 353 aa8.02□□□□□ -1.13
KRT39-202ENST00000578029 MARVELD3Q96A59 401 aa8.02□□□□□ -1.13
KRT39-202ENST00000578029 ZBED2Q9BTP6 218 aa8.02□□□□□ -1.13
KRT39-202ENST00000578029 MTMR7Q9Y216 660 aa8.02□□□□□ -1.13
KRT39-202ENST00000578029 SEMA3FQ13275 785 aa8.01□□□□□ -1.13
KRT39-202ENST00000578029 SLF2Q8IX21 1173 aa8.01□□□□□ -1.13
KRT39-202ENST00000578029 RABGEF1Q9UJ41 708 aa8.01□□□□□ -1.13
KRT39-202ENST00000578029 POTEB3A0JP26 581 aa8□□□□□ -1.13
KRT39-202ENST00000578029 FUT2Q10981 343 aa8□□□□□ -1.13
KRT39-202ENST00000578029 POTEBQ6S5H4 581 aa8□□□□□ -1.13
KRT39-202ENST00000578029 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
KRT39-202ENST00000578029 ATP6V1AP38606 617 aa7.99□□□□□ -1.13
KRT39-202ENST00000578029 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
KRT39-202ENST00000578029 EPS8L1Q8TE68 723 aa7.99□□□□□ -1.13
KRT39-202ENST00000578029 ATG7O95352 703 aa7.98□□□□□ -1.13
KRT39-202ENST00000578029 UCN2Q96RP3 112 aa7.98□□□□□ -1.13
KRT39-202ENST00000578029 CFHP08603 1231 aa7.97□□□□□ -1.13
KRT39-202ENST00000578029 EMP3P54852 163 aa7.97□□□□□ -1.13
KRT39-202ENST00000578029 EIF4G2P78344 907 aaKnown RBP eCLIP7.97□□□□□ -1.13
KRT39-202ENST00000578029 NR6A1Q15406 480 aa7.97□□□□□ -1.13
KRT39-202ENST00000578029 FAM98CQ17RN3 349 aaKnown RBP7.97□□□□□ -1.13
KRT39-202ENST00000578029 SLC4A5Q9BY07 1137 aa7.97□□□□□ -1.13
KRT39-202ENST00000578029 SEPT9Q9UHD8 586 aaPredicted RBP7.97□□□□□ -1.13
KRT39-202ENST00000578029 RETREG3Q86VR2 466 aa7.96□□□□□ -1.14
KRT39-202ENST00000578029 VRTNQ9H8Y1 702 aa7.96□□□□□ -1.14
KRT39-202ENST00000578029 FAM205CA6NFA0 338 aa7.95□□□□□ -1.14
KRT39-202ENST00000578029 PSEN2P49810 448 aa7.95□□□□□ -1.14
KRT39-202ENST00000578029 KMT5BQ4FZB7 885 aa7.95□□□□□ -1.14
KRT39-202ENST00000578029 SYMPKQ92797 1274 aaKnown RBP7.95□□□□□ -1.14
KRT39-202ENST00000578029 MAFBQ9Y5Q3 323 aaPredicted RBP7.95□□□□□ -1.14
KRT39-202ENST00000578029 ARHGAP33O14559 1287 aa7.94□□□□□ -1.14
KRT39-202ENST00000578029 Q3C1V9 767 aa7.94□□□□□ -1.14
KRT39-202ENST00000578029 CDCA8Q53HL2 280 aa7.94□□□□□ -1.14
KRT39-202ENST00000578029 FOXD4L5Q5VV16 416 aaPredicted RBP7.94□□□□□ -1.14
KRT39-202ENST00000578029 DESI1Q6ICB0 168 aa7.94□□□□□ -1.14
KRT39-202ENST00000578029 POTEGQ6S5H5 508 aa7.94□□□□□ -1.14
KRT39-202ENST00000578029 FOXD4L4Q8WXT5 416 aaPredicted RBP7.94□□□□□ -1.14
KRT39-202ENST00000578029 HS3ST6Q96QI5 342 aa7.94□□□□□ -1.14
KRT39-202ENST00000578029 POTEMA6NI47 508 aa7.93□□□□□ -1.14
KRT39-202ENST00000578029 PER1O15534 1290 aaPredicted RBP7.93□□□□□ -1.14
KRT39-202ENST00000578029 ATP9BO43861 1147 aa7.93□□□□□ -1.14
KRT39-202ENST00000578029 B4GALNT3Q6L9W6 998 aa7.93□□□□□ -1.14
KRT39-202ENST00000578029 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
KRT39-202ENST00000578029 LAPTM4BQ86VI4 370 aa7.93□□□□□ -1.14
KRT39-202ENST00000578029 IVNS1ABPQ9Y6Y0 642 aa7.93□□□□□ -1.14
KRT39-202ENST00000578029 ERBB3P21860 1342 aa7.93□□□□□ -1.14
KRT39-202ENST00000578029 CARNS1A5YM72 827 aa7.92□□□□□ -1.14
KRT39-202ENST00000578029 TMEM88BA6NKF7 163 aa7.92□□□□□ -1.14
KRT39-202ENST00000578029 RNF40O75150 1001 aa7.92□□□□□ -1.14
KRT39-202ENST00000578029 RBM25P49756 843 aaKnown RBP7.92□□□□□ -1.14
KRT39-202ENST00000578029 NR1H3Q13133 447 aa7.92□□□□□ -1.14
KRT39-202ENST00000578029 VARS2Q5ST30 1063 aaKnown RBP7.92□□□□□ -1.14
KRT39-202ENST00000578029 TBC1D9Q6ZT07 1266 aa7.92□□□□□ -1.14
KRT39-202ENST00000578029 CCDC27Q2M243 656 aa7.91□□□□□ -1.14
KRT39-202ENST00000578029 MORN1Q5T089 497 aa7.91□□□□□ -1.14
KRT39-202ENST00000578029 POTEEQ6S8J3 1075 aa7.9□□□□□ -1.14
KRT39-202ENST00000578029 LYPD8Q6UX82 237 aa7.9□□□□□ -1.14
KRT39-202ENST00000578029 SND1Q7KZF4 910 aaKnown RBP eCLIP7.9□□□□□ -1.14
KRT39-202ENST00000578029 NBPF3Q9H094 633 aa7.9□□□□□ -1.14
KRT39-202ENST00000578029 ZBBXA8MT70 800 aa7.89□□□□□ -1.15
KRT39-202ENST00000578029 ELOAQ14241 798 aaKnown RBP7.89□□□□□ -1.15
KRT39-202ENST00000578029 ZNF687Q8N1G0 1237 aa7.89□□□□□ -1.15
KRT39-202ENST00000578029 NFATC2IPQ8NCF5 419 aa7.89□□□□□ -1.15
KRT39-202ENST00000578029 SLC27A5Q9Y2P5 690 aa7.89□□□□□ -1.15
KRT39-202ENST00000578029 ACTN4O43707 911 aaKnown RBP7.88□□□□□ -1.15
KRT39-202ENST00000578029 DMRTA1Q5VZB9 504 aa7.88□□□□□ -1.15
KRT39-202ENST00000578029 PRR14Q9BWN1 585 aa7.88□□□□□ -1.15
KRT39-202ENST00000578029 VPS9D1Q9Y2B5 631 aa7.88□□□□□ -1.15
KRT39-202ENST00000578029 AMOTL2Q9Y2J4 779 aa7.88□□□□□ -1.15
KRT39-202ENST00000578029 FBXO45P0C2W1 286 aa7.87□□□□□ -1.15
KRT39-202ENST00000578029 PBX2P40425 430 aa7.87□□□□□ -1.15
KRT39-202ENST00000578029 PUS10Q3MIT2 529 aaKnown RBP7.87□□□□□ -1.15
KRT39-202ENST00000578029 KANK4Q5T7N3 995 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms