RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PROSER2Q86WR7 435 aaPredicted RBP18.02■□□□□ 0.48
MKS1-206ENST00000577824 PRAM1Q96QH2 718 aa18.02■□□□□ 0.48
MKS1-206ENST00000577824 CENPJQ9HC77 1338 aaPredicted RBP18■□□□□ 0.47
MKS1-206ENST00000577824 WAPLQ7Z5K2 1190 aa18■□□□□ 0.47
MKS1-206ENST00000577824 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
MKS1-206ENST00000577824 FMN2Q9NZ56 1722 aa17.98■□□□□ 0.47
MKS1-206ENST00000577824 MSH6P52701 1360 aa17.98■□□□□ 0.47
MKS1-206ENST00000577824 CERKQ8TCT0 537 aa17.96■□□□□ 0.47
MKS1-206ENST00000577824 POGKQ9P215 609 aa17.96■□□□□ 0.47
MKS1-206ENST00000577824 C19orf44Q9H6X5 657 aa17.95■□□□□ 0.46
MKS1-206ENST00000577824 RBM33Q96EV2 1170 aaKnown RBP17.94■□□□□ 0.46
MKS1-206ENST00000577824 TESK2Q96S53 571 aa17.94■□□□□ 0.46
MKS1-206ENST00000577824 MST1RQ04912 1400 aa17.93■□□□□ 0.46
MKS1-206ENST00000577824 ANKARQ7Z5J8 1434 aa17.93■□□□□ 0.46
MKS1-206ENST00000577824 USP32Q8NFA0 1604 aa17.93■□□□□ 0.46
MKS1-206ENST00000577824 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
MKS1-206ENST00000577824 ST20-MTHFSA0A0A6YYL1 179 aa17.92■□□□□ 0.46
MKS1-206ENST00000577824 EIF4G2P78344 907 aaKnown RBP eCLIP17.92■□□□□ 0.46
MKS1-206ENST00000577824 ATP7BP35670 1465 aa17.91■□□□□ 0.46
MKS1-206ENST00000577824 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
MKS1-206ENST00000577824 SAFB2Q14151 953 aaKnown RBP eCLIP17.9■□□□□ 0.46
MKS1-206ENST00000577824 CADPS2Q86UW7 1296 aa17.9■□□□□ 0.46
MKS1-206ENST00000577824 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
MKS1-206ENST00000577824 HSPA5P11021 654 aaKnown RBP17.89■□□□□ 0.45
MKS1-206ENST00000577824 C1orf167Q5SNV9 1468 aa17.88■□□□□ 0.45
MKS1-206ENST00000577824 WASLO00401 505 aaPredicted RBP17.88■□□□□ 0.45
MKS1-206ENST00000577824 C14orf37Q86TY3 774 aa17.88■□□□□ 0.45
MKS1-206ENST00000577824 ITSN1Q15811 1721 aa17.88■□□□□ 0.45
MKS1-206ENST00000577824 ATF3P18847 181 aa17.86■□□□□ 0.45
MKS1-206ENST00000577824 PUS7Q96PZ0 661 aaKnown RBP17.86■□□□□ 0.45
MKS1-206ENST00000577824 HIRIP3Q9BW71 556 aaPredicted RBP17.86■□□□□ 0.45
MKS1-206ENST00000577824 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
MKS1-206ENST00000577824 KIF1AQ12756 1690 aa17.86■□□□□ 0.45
MKS1-206ENST00000577824 DISP3Q9P2K9 1392 aa17.85■□□□□ 0.45
MKS1-206ENST00000577824 ROBO1Q9Y6N7 1651 aa17.83■□□□□ 0.45
MKS1-206ENST00000577824 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.44
MKS1-206ENST00000577824 ATAD2Q6PL18 1390 aa17.82■□□□□ 0.44
MKS1-206ENST00000577824 TOM1O60784 492 aa17.82■□□□□ 0.44
MKS1-206ENST00000577824 CDK19Q9BWU1 502 aa17.82■□□□□ 0.44
MKS1-206ENST00000577824 MYOM1P52179 1685 aa17.82■□□□□ 0.44
MKS1-206ENST00000577824 NHSL1Q5SYE7 1610 aa17.82■□□□□ 0.44
MKS1-206ENST00000577824 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
MKS1-206ENST00000577824 AHDC1Q5TGY3 1603 aaPredicted RBP17.81■□□□□ 0.44
MKS1-206ENST00000577824 TMF1P82094 1093 aa17.81■□□□□ 0.44
MKS1-206ENST00000577824 SLAIN2Q9P270 581 aa17.81■□□□□ 0.44
MKS1-206ENST00000577824 NINLQ9Y2I6 1382 aa17.79■□□□□ 0.44
MKS1-206ENST00000577824 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
MKS1-206ENST00000577824 CDCA8Q53HL2 280 aa17.78■□□□□ 0.44
MKS1-206ENST00000577824 SRPK2P78362 688 aaKnown RBP17.77■□□□□ 0.44
MKS1-206ENST00000577824 NUDT16Q96DE0 195 aaKnown RBP17.77■□□□□ 0.44
MKS1-206ENST00000577824 CABP2Q9NPB3 220 aa17.77■□□□□ 0.44
MKS1-206ENST00000577824 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.43
MKS1-206ENST00000577824 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
MKS1-206ENST00000577824 BRINP3Q76B58 766 aa17.76■□□□□ 0.43
MKS1-206ENST00000577824 CCDC61Q9Y6R9 512 aa17.76■□□□□ 0.43
MKS1-206ENST00000577824 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
MKS1-206ENST00000577824 AKAP12Q02952 1782 aa17.74■□□□□ 0.43
MKS1-206ENST00000577824 PLEKHG3A1L390 1219 aa17.74■□□□□ 0.43
MKS1-206ENST00000577824 ORAI2Q96SN7 254 aa17.74■□□□□ 0.43
MKS1-206ENST00000577824 PXDNQ92626 1479 aa17.74■□□□□ 0.43
MKS1-206ENST00000577824 NRKQ7Z2Y5 1582 aa17.74■□□□□ 0.43
MKS1-206ENST00000577824 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
MKS1-206ENST00000577824 MON2Q7Z3U7 1717 aa17.73■□□□□ 0.43
MKS1-206ENST00000577824 COL16A1Q07092 1604 aaPredicted RBP17.72■□□□□ 0.43
MKS1-206ENST00000577824 NUTM2FA1L443 756 aa17.72■□□□□ 0.43
MKS1-206ENST00000577824 C11orf95C9JLR9 678 aaPredicted RBP17.72■□□□□ 0.43
MKS1-206ENST00000577824 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
MKS1-206ENST00000577824 TRPM3Q9HCF6 1732 aaPredicted RBP17.72■□□□□ 0.43
MKS1-206ENST00000577824 KIF7Q2M1P5 1343 aa17.72■□□□□ 0.43
MKS1-206ENST00000577824 CCDC7Q96M83 1385 aa17.71■□□□□ 0.43
MKS1-206ENST00000577824 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
MKS1-206ENST00000577824 FBXO41Q8TF61 875 aa17.7■□□□□ 0.42
MKS1-206ENST00000577824 WASHC2AQ641Q2 1341 aa17.7■□□□□ 0.42
MKS1-206ENST00000577824 NPHP3Q7Z494 1330 aa17.7■□□□□ 0.42
MKS1-206ENST00000577824 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
MKS1-206ENST00000577824 BRD4O60885 1362 aaPredicted RBP17.69■□□□□ 0.42
MKS1-206ENST00000577824 ANKRD36BQ8N2N9 1353 aa17.69■□□□□ 0.42
MKS1-206ENST00000577824 USP6P35125 1406 aa17.68■□□□□ 0.42
MKS1-206ENST00000577824 SSH2Q76I76 1423 aa17.68■□□□□ 0.42
MKS1-206ENST00000577824 SOS2Q07890 1332 aaPredicted RBP17.68■□□□□ 0.42
MKS1-206ENST00000577824 A0A1W2PP64 1363 aa17.67■□□□□ 0.42
MKS1-206ENST00000577824 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
MKS1-206ENST00000577824 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
MKS1-206ENST00000577824 ACEP12821 1306 aa17.67■□□□□ 0.42
MKS1-206ENST00000577824 PIP4K2BP78356 416 aa17.66■□□□□ 0.42
MKS1-206ENST00000577824 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
MKS1-206ENST00000577824 USP54Q70EL1 1684 aa17.65■□□□□ 0.42
MKS1-206ENST00000577824 PMFBP1Q8TBY8 1022 aa17.65■□□□□ 0.42
MKS1-206ENST00000577824 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.42
MKS1-206ENST00000577824 SLC12A5Q9H2X9 1139 aa17.64■□□□□ 0.41
MKS1-206ENST00000577824 MED1Q15648 1581 aaPredicted RBP17.63■□□□□ 0.41
MKS1-206ENST00000577824 COL22A1Q8NFW1 1626 aaPredicted RBP17.63■□□□□ 0.41
MKS1-206ENST00000577824 FOXO3O43524 673 aa17.63■□□□□ 0.41
MKS1-206ENST00000577824 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
MKS1-206ENST00000577824 SHPRHQ149N8 1683 aa17.63■□□□□ 0.41
MKS1-206ENST00000577824 TNS3Q68CZ2 1445 aa17.63■□□□□ 0.41
MKS1-206ENST00000577824 NGDNQ8NEJ9 315 aaKnown RBP17.62■□□□□ 0.41
MKS1-206ENST00000577824 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
MKS1-206ENST00000577824 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
MKS1-206ENST00000577824 PIK3C2AO00443 1686 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms