RNA–Protein interactions for RNA: ENST00000577549.1

DHX40-204, Transcript of DEAH-box helicase 40, humanhuman

TSL 2

Gene DHX40, Length 2,654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-204ENST00000577549 GJA5P36382 358 aa6.79□□□□□ -1.32
DHX40-204ENST00000577549 FOSBP53539 338 aa6.79□□□□□ -1.32
DHX40-204ENST00000577549 SLAIN2Q9P270 581 aa6.79□□□□□ -1.32
DHX40-204ENST00000577549 PCDHGA4Q9Y5G9 962 aa6.79□□□□□ -1.32
DHX40-204ENST00000577549 FAM177A1Q8N128 213 aaPredicted RBP6.78□□□□□ -1.32
DHX40-204ENST00000577549 CERKQ8TCT0 537 aa6.78□□□□□ -1.32
DHX40-204ENST00000577549 PIK3CDO00329 1044 aa6.78□□□□□ -1.32
DHX40-204ENST00000577549 L3MBTL3Q96JM7 780 aaPredicted RBP6.78□□□□□ -1.32
DHX40-204ENST00000577549 RBM27Q9P2N5 1060 aaKnown RBP6.78□□□□□ -1.32
DHX40-204ENST00000577549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.77□□□□□ -1.33
DHX40-204ENST00000577549 KANK4Q5T7N3 995 aaPredicted RBP6.77□□□□□ -1.33
DHX40-204ENST00000577549 ZNF454Q8N9F8 522 aa6.77□□□□□ -1.33
DHX40-204ENST00000577549 CFAP99D6REC4 459 aa6.77□□□□□ -1.33
DHX40-204ENST00000577549 ZBTB3Q9H5J0 574 aa6.77□□□□□ -1.33
DHX40-204ENST00000577549 TSKSQ9UJT2 592 aa6.77□□□□□ -1.33
DHX40-204ENST00000577549 KDM4AO75164 1064 aa6.76□□□□□ -1.33
DHX40-204ENST00000577549 COL9A1P20849 921 aa6.76□□□□□ -1.33
DHX40-204ENST00000577549 IER5LQ5T953 404 aa6.76□□□□□ -1.33
DHX40-204ENST00000577549 ASTLQ6HA08 431 aaPredicted RBP6.76□□□□□ -1.33
DHX40-204ENST00000577549 NUDT18Q6ZVK8 323 aa6.76□□□□□ -1.33
DHX40-204ENST00000577549 RIMBP3CA6NJZ7 1639 aa6.76□□□□□ -1.33
DHX40-204ENST00000577549 RIMBP3BA6NNM3 1639 aa6.76□□□□□ -1.33
DHX40-204ENST00000577549 RIMBP3Q9UFD9 1639 aa6.76□□□□□ -1.33
DHX40-204ENST00000577549 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
DHX40-204ENST00000577549 PRPF38BQ5VTL8 546 aaKnown RBP6.76□□□□□ -1.33
DHX40-204ENST00000577549 ZDHHC16Q969W1 377 aa6.76□□□□□ -1.33
DHX40-204ENST00000577549 HOXA2O43364 376 aa6.75□□□□□ -1.33
DHX40-204ENST00000577549 KHSRPQ92945 711 aaKnown RBP eCLIP6.75□□□□□ -1.332e-8■■■□□ 14.7
DHX40-204ENST00000577549 SMAPO00193 183 aa6.75□□□□□ -1.33
DHX40-204ENST00000577549 FDX1P10109 184 aa6.75□□□□□ -1.33
DHX40-204ENST00000577549 SERPINB4P48594 390 aa6.75□□□□□ -1.33
DHX40-204ENST00000577549 NR6A1Q15406 480 aa6.75□□□□□ -1.33
DHX40-204ENST00000577549 SULF1Q8IWU6 871 aa6.75□□□□□ -1.33
DHX40-204ENST00000577549 RDH13Q8NBN7 331 aa6.75□□□□□ -1.33
DHX40-204ENST00000577549 BAZ1AQ9NRL2 1556 aaPredicted RBP6.74□□□□□ -1.33
DHX40-204ENST00000577549 PELP1Q8IZL8 1130 aaKnown RBP6.74□□□□□ -1.33
DHX40-204ENST00000577549 POTEFA5A3E0 1075 aa6.74□□□□□ -1.33
DHX40-204ENST00000577549 EVX2Q03828 476 aa6.74□□□□□ -1.33
DHX40-204ENST00000577549 PER1O15534 1290 aaPredicted RBP6.73□□□□□ -1.33
DHX40-204ENST00000577549 SEMA3FQ13275 785 aa6.73□□□□□ -1.33
DHX40-204ENST00000577549 SYMPKQ92797 1274 aaKnown RBP6.73□□□□□ -1.33
DHX40-204ENST00000577549 TMEM134Q9H6X4 195 aa6.73□□□□□ -1.33
DHX40-204ENST00000577549 TAGLNQ01995 201 aaKnown RBP6.73□□□□□ -1.33
DHX40-204ENST00000577549 DEPDC4Q8N2C3 294 aa6.73□□□□□ -1.33
DHX40-204ENST00000577549 ATP9BO43861 1147 aa6.73□□□□□ -1.33
DHX40-204ENST00000577549 CRTC2Q53ET0 693 aaPredicted RBP6.72□□□□□ -1.33
DHX40-204ENST00000577549 GIPC2Q8TF65 315 aa6.72□□□□□ -1.33
DHX40-204ENST00000577549 NOVA2Q9UNW9 492 aaKnown RBP6.72□□□□□ -1.33
DHX40-204ENST00000577549 NUDT7P0C024 238 aa6.71□□□□□ -1.34
DHX40-204ENST00000577549 SSFA2P28290 1259 aa6.71□□□□□ -1.34
DHX40-204ENST00000577549 ELOAQ14241 798 aaKnown RBP6.71□□□□□ -1.34
DHX40-204ENST00000577549 CCER1Q8TC90 406 aaPredicted RBP6.71□□□□□ -1.34
DHX40-204ENST00000577549 BCL2L13Q9BXK5 485 aa6.71□□□□□ -1.34
DHX40-204ENST00000577549 SEC24BO95487 1268 aa6.71□□□□□ -1.34
DHX40-204ENST00000577549 DNAJB2P25686 324 aa6.71□□□□□ -1.34
DHX40-204ENST00000577549 MTMR2Q13614 643 aa6.71□□□□□ -1.34
DHX40-204ENST00000577549 CCDC125Q86Z20 511 aa6.7□□□□□ -1.34
DHX40-204ENST00000577549 LMTK3Q96Q04 1460 aa6.7□□□□□ -1.34
DHX40-204ENST00000577549 SLC10A3P09131 477 aa6.7□□□□□ -1.34
DHX40-204ENST00000577549 FAM69CQ0P6D2 419 aa6.7□□□□□ -1.34
DHX40-204ENST00000577549 B4GALNT3Q6L9W6 998 aa6.7□□□□□ -1.34
DHX40-204ENST00000577549 HELBQ8NG08 1087 aaPredicted RBP6.7□□□□□ -1.34
DHX40-204ENST00000577549 FBXO41Q8TF61 875 aa6.7□□□□□ -1.34
DHX40-204ENST00000577549 PNMA3Q9UL41 463 aa6.7□□□□□ -1.34
DHX40-204ENST00000577549 GCGRP47871 477 aa6.69□□□□□ -1.34
DHX40-204ENST00000577549 SIRT1Q96EB6 747 aa6.69□□□□□ -1.34
DHX40-204ENST00000577549 SOX11P35716 441 aa6.69□□□□□ -1.34
DHX40-204ENST00000577549 SOWAHDA6NJG2 315 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 TCF3P15923 654 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 ERCC3P19447 782 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 C3orf67Q6ZVT6 689 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 TATDN2Q93075 761 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 USP17L3A6NCW0 530 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 USP17L4A6NCW7 530 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 C6orf229H3BNL8 230 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 USP17L2Q6R6M4 530 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 USP17L1Q7RTZ2 530 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 FAM174AQ8TBP5 190 aa6.68□□□□□ -1.34
DHX40-204ENST00000577549 ERCC6Q03468 1493 aa6.67□□□□□ -1.34
DHX40-204ENST00000577549 ANKRD33BA6NCL7 494 aa6.67□□□□□ -1.34
DHX40-204ENST00000577549 FBXO45P0C2W1 286 aa6.67□□□□□ -1.34
DHX40-204ENST00000577549 MARSP56192 900 aaKnown RBP6.67□□□□□ -1.34
DHX40-204ENST00000577549 NPAS4Q8IUM7 802 aa6.66□□□□□ -1.34
DHX40-204ENST00000577549 ARID4AP29374 1257 aaPredicted RBP6.65□□□□□ -1.34
DHX40-204ENST00000577549 SLF2Q8IX21 1173 aa6.65□□□□□ -1.34
DHX40-204ENST00000577549 BIN2Q9UBW5 565 aaPredicted RBP6.65□□□□□ -1.34
DHX40-204ENST00000577549 SMARCA5O60264 1052 aaPredicted RBP6.65□□□□□ -1.35
DHX40-204ENST00000577549 PROX2Q3B8N5 592 aa6.65□□□□□ -1.35
DHX40-204ENST00000577549 ARSIQ5FYB1 569 aa6.65□□□□□ -1.35
DHX40-204ENST00000577549 USP17L5A8MUK1 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L15C9J2P7 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L10C9JJH3 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L13C9JLJ4 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L12C9JPN9 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L11C9JVI0 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L21D6R901 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L18D6R9N7 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L22D6RA61 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L17D6RBQ6 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L19D6RCP7 530 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms