RNA–Protein interactions for RNA: ENST00000574916.1

MRM3-204, Transcript of mitochondrial rRNA methyltransferase 3, humanhuman

TSL 2

Gene MRM3, Length 770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3-204ENST00000574916 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.2■■■□□ 2.43
MRM3-204ENST00000574916 CARD11Q9BXL7 1154 aa30.2■■■□□ 2.43
MRM3-204ENST00000574916 TOM1O60784 492 aa30.19■■■□□ 2.42
MRM3-204ENST00000574916 CADPS2Q86UW7 1296 aa30.17■■■□□ 2.42
MRM3-204ENST00000574916 UBAP1LF5GYI3 381 aa30.15■■■□□ 2.42
MRM3-204ENST00000574916 ATF3P18847 181 aa30.15■■■□□ 2.42
MRM3-204ENST00000574916 EIF3AQ14152 1382 aaKnown RBP30.15■■■□□ 2.42
MRM3-204ENST00000574916 CDC42BPGQ6DT37 1551 aa30.12■■■□□ 2.41
MRM3-204ENST00000574916 CENPJQ9HC77 1338 aaPredicted RBP30.12■■■□□ 2.41
MRM3-204ENST00000574916 SAFB2Q14151 953 aaKnown RBP eCLIP30.11■■■□□ 2.41
MRM3-204ENST00000574916 FBXO41Q8TF61 875 aa30.11■■■□□ 2.41
MRM3-204ENST00000574916 ADGRB2O60241 1585 aa30.1■■■□□ 2.41
MRM3-204ENST00000574916 SLAIN2Q9P270 581 aa30.08■■■□□ 2.41
MRM3-204ENST00000574916 MST1RQ04912 1400 aa30.05■■■□□ 2.4
MRM3-204ENST00000574916 MINK1Q8N4C8 1332 aaPredicted RBP30.05■■■□□ 2.4
MRM3-204ENST00000574916 QRICH2Q9H0J4 1663 aa30.03■■■□□ 2.4
MRM3-204ENST00000574916 FMN2Q9NZ56 1722 aa30.02■■■□□ 2.4
MRM3-204ENST00000574916 SBNO2Q9Y2G9 1366 aa30.02■■■□□ 2.4
MRM3-204ENST00000574916 WASLO00401 505 aaPredicted RBP30.01■■■□□ 2.39
MRM3-204ENST00000574916 HIRIP3Q9BW71 556 aaPredicted RBP30■■■□□ 2.39
MRM3-204ENST00000574916 USP47Q96K76 1375 aa30■■■□□ 2.39
MRM3-204ENST00000574916 C1orf167Q5SNV9 1468 aa29.99■■■□□ 2.39
MRM3-204ENST00000574916 PIP4K2BP78356 416 aa29.97■■■□□ 2.39
MRM3-204ENST00000574916 ANKARQ7Z5J8 1434 aa29.96■■■□□ 2.39
MRM3-204ENST00000574916 ST20-MTHFSA0A0A6YYL1 179 aa29.95■■■□□ 2.39
MRM3-204ENST00000574916 SLC24A1O60721 1099 aa29.95■■■□□ 2.39
MRM3-204ENST00000574916 ROBO1Q9Y6N7 1651 aa29.93■■■□□ 2.38
MRM3-204ENST00000574916 CDK19Q9BWU1 502 aa29.93■■■□□ 2.38
MRM3-204ENST00000574916 TULP4Q9NRJ4 1543 aa29.92■■■□□ 2.38
MRM3-204ENST00000574916 EVC2Q86UK5 1308 aa29.92■■■□□ 2.38
MRM3-204ENST00000574916 SCAF1Q9H7N4 1312 aaKnown RBP29.92■■■□□ 2.38
MRM3-204ENST00000574916 BRINP3Q76B58 766 aa29.91■■■□□ 2.38
MRM3-204ENST00000574916 TESK2Q96S53 571 aa29.91■■■□□ 2.38
MRM3-204ENST00000574916 ZEB1P37275 1124 aaPredicted RBP29.9■■■□□ 2.38
MRM3-204ENST00000574916 EIF4G2P78344 907 aaKnown RBP eCLIP29.9■■■□□ 2.38
MRM3-204ENST00000574916 NUTM2FA1L443 756 aa29.88■■■□□ 2.37
MRM3-204ENST00000574916 USP32Q8NFA0 1604 aa29.88■■■□□ 2.37
MRM3-204ENST00000574916 ORAI2Q96SN7 254 aa29.87■■■□□ 2.37
MRM3-204ENST00000574916 ESCO1Q5FWF5 840 aa29.86■■■□□ 2.37
MRM3-204ENST00000574916 PRR36Q9H6K5 1346 aa29.86■■■□□ 2.37
MRM3-204ENST00000574916 RGPD8O14715 1765 aaPredicted RBP29.85■■■□□ 2.37
MRM3-204ENST00000574916 NUDT16Q96DE0 195 aaKnown RBP29.85■■■□□ 2.37
MRM3-204ENST00000574916 ATP7BP35670 1465 aa29.85■■■□□ 2.37
MRM3-204ENST00000574916 PUS7Q96PZ0 661 aaKnown RBP29.84■■■□□ 2.37
MRM3-204ENST00000574916 SRPK2P78362 688 aaKnown RBP29.83■■■□□ 2.37
MRM3-204ENST00000574916 HSPA5P11021 654 aaKnown RBP29.82■■■□□ 2.36
MRM3-204ENST00000574916 KIF1AQ12756 1690 aa29.82■■■□□ 2.36
MRM3-204ENST00000574916 AHDC1Q5TGY3 1603 aaPredicted RBP29.82■■■□□ 2.36
MRM3-204ENST00000574916 CABP2Q9NPB3 220 aa29.81■■■□□ 2.36
MRM3-204ENST00000574916 PHF8Q9UPP1 1060 aa29.81■■■□□ 2.36
MRM3-204ENST00000574916 CCDC61Q9Y6R9 512 aa29.81■■■□□ 2.36
MRM3-204ENST00000574916 ITSN1Q15811 1721 aa29.8■■■□□ 2.36
MRM3-204ENST00000574916 NHSL1Q5SYE7 1610 aa29.79■■■□□ 2.36
MRM3-204ENST00000574916 TMF1P82094 1093 aa29.79■■■□□ 2.36
MRM3-204ENST00000574916 TOPAZ1Q8N9V7 1692 aa29.78■■■□□ 2.36
MRM3-204ENST00000574916 ATAD2Q6PL18 1390 aa29.77■■■□□ 2.36
MRM3-204ENST00000574916 HSPA1LP34931 641 aa29.76■■■□□ 2.35
MRM3-204ENST00000574916 NPHP3Q7Z494 1330 aa29.75■■■□□ 2.35
MRM3-204ENST00000574916 PLEKHG3A1L390 1219 aa29.75■■■□□ 2.35
MRM3-204ENST00000574916 PHLPP1O60346 1717 aa29.74■■■□□ 2.35
MRM3-204ENST00000574916 CDCA8Q53HL2 280 aa29.73■■■□□ 2.35
MRM3-204ENST00000574916 FOXO3O43524 673 aa29.72■■■□□ 2.35
MRM3-204ENST00000574916 DISP3Q9P2K9 1392 aa29.72■■■□□ 2.35
MRM3-204ENST00000574916 SOS2Q07890 1332 aaPredicted RBP29.71■■■□□ 2.35
MRM3-204ENST00000574916 PMFBP1Q8TBY8 1022 aa29.71■■■□□ 2.35
MRM3-204ENST00000574916 PPIP5K1Q6PFW1 1433 aa29.71■■■□□ 2.35
MRM3-204ENST00000574916 POLR3AO14802 1390 aaPredicted RBP29.7■■■□□ 2.35
MRM3-204ENST00000574916 DDX17Q92841 729 aaKnown RBP29.69■■■□□ 2.34
MRM3-204ENST00000574916 COL16A1Q07092 1604 aaPredicted RBP29.69■■■□□ 2.34
MRM3-204ENST00000574916 CABP1Q9NZU7 370 aa29.68■■■□□ 2.34
MRM3-204ENST00000574916 NGDNQ8NEJ9 315 aaKnown RBP29.67■■■□□ 2.34
MRM3-204ENST00000574916 PXDNQ92626 1479 aa29.67■■■□□ 2.34
MRM3-204ENST00000574916 LRRC59Q96AG4 307 aaKnown RBP29.65■■■□□ 2.34
MRM3-204ENST00000574916 ACEP12821 1306 aa29.65■■■□□ 2.34
MRM3-204ENST00000574916 NINLQ9Y2I6 1382 aa29.64■■■□□ 2.34
MRM3-204ENST00000574916 PSME1Q06323 249 aa29.64■■■□□ 2.34
MRM3-204ENST00000574916 KRT28Q7Z3Y7 464 aa29.64■■■□□ 2.34
MRM3-204ENST00000574916 SBNO1A3KN83 1393 aa29.61■■■□□ 2.33
MRM3-204ENST00000574916 ZNF692Q9BU19 519 aaPredicted RBP29.6■■■□□ 2.33
MRM3-204ENST00000574916 BRD4O60885 1362 aaPredicted RBP29.59■■■□□ 2.33
MRM3-204ENST00000574916 XPCQ01831 940 aaPredicted RBP29.58■■■□□ 2.33
MRM3-204ENST00000574916 CPSF1Q10570 1443 aaKnown RBP29.58■■■□□ 2.33
MRM3-204ENST00000574916 JCADQ9P266 1359 aa29.58■■■□□ 2.33
MRM3-204ENST00000574916 TMC1Q8TDI8 760 aa29.57■■■□□ 2.32
MRM3-204ENST00000574916 SLC12A5Q9H2X9 1139 aa29.57■■■□□ 2.32
MRM3-204ENST00000574916 SPATA31A3Q5VYP0 1347 aa29.56■■■□□ 2.32
MRM3-204ENST00000574916 TRPM3Q9HCF6 1732 aaPredicted RBP29.56■■■□□ 2.32
MRM3-204ENST00000574916 AKAP12Q02952 1782 aa29.55■■■□□ 2.32
MRM3-204ENST00000574916 C11orf95C9JLR9 678 aaPredicted RBP29.54■■■□□ 2.32
MRM3-204ENST00000574916 CD163L1Q9NR16 1453 aa29.54■■■□□ 2.32
MRM3-204ENST00000574916 USP6P35125 1406 aa29.54■■■□□ 2.32
MRM3-204ENST00000574916 SHPRHQ149N8 1683 aa29.53■■■□□ 2.32
MRM3-204ENST00000574916 TERF2IPQ9NYB0 399 aa29.53■■■□□ 2.32
MRM3-204ENST00000574916 TNS3Q68CZ2 1445 aa29.53■■■□□ 2.32
MRM3-204ENST00000574916 HDGFL2Q7Z4V5 671 aaPredicted RBP29.52■■■□□ 2.32
MRM3-204ENST00000574916 PNPLA6Q8IY17 1366 aa29.52■■■□□ 2.32
MRM3-204ENST00000574916 SSH2Q76I76 1423 aa29.5■■■□□ 2.31
MRM3-204ENST00000574916 MYOM1P52179 1685 aa29.49■■■□□ 2.31
MRM3-204ENST00000574916 ARHGEF10O15013 1369 aa29.49■■■□□ 2.31
MRM3-204ENST00000574916 KTN1Q86UP2 1357 aaKnown RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms