RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 KDM2AQ9Y2K7 1162 aa13.52□□□□□ -0.25
NDE1-208ENST00000573694 LRPPRCP42704 1394 aaKnown RBP13.52□□□□□ -0.25
NDE1-208ENST00000573694 LAMC1P11047 1609 aa13.52□□□□□ -0.25
NDE1-208ENST00000573694 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.25
NDE1-208ENST00000573694 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
NDE1-208ENST00000573694 ASXL1Q8IXJ9 1541 aa13.5□□□□□ -0.25
NDE1-208ENST00000573694 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
NDE1-208ENST00000573694 SHPRHQ149N8 1683 aa13.5□□□□□ -0.25
NDE1-208ENST00000573694 MYOM2P54296 1465 aa13.49□□□□□ -0.25
NDE1-208ENST00000573694 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
NDE1-208ENST00000573694 ROBO2Q9HCK4 1378 aa13.49□□□□□ -0.25
NDE1-208ENST00000573694 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
NDE1-208ENST00000573694 SENP3Q9H4L4 574 aaPredicted RBP13.49□□□□□ -0.25
NDE1-208ENST00000573694 SETD1AO15047 1707 aaKnown RBP13.49□□□□□ -0.25
NDE1-208ENST00000573694 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
NDE1-208ENST00000573694 ADGRF5Q8IZF2 1346 aa13.48□□□□□ -0.25
NDE1-208ENST00000573694 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
NDE1-208ENST00000573694 USP47Q96K76 1375 aa13.47□□□□□ -0.25
NDE1-208ENST00000573694 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
NDE1-208ENST00000573694 KIAA1210Q9ULL0 1709 aa13.47□□□□□ -0.25
NDE1-208ENST00000573694 NHSL1Q5SYE7 1610 aa13.46□□□□□ -0.26
NDE1-208ENST00000573694 CDC42BPGQ6DT37 1551 aa13.45□□□□□ -0.26
NDE1-208ENST00000573694 MEX3CQ5U5Q3 659 aaKnown RBP13.45□□□□□ -0.26
NDE1-208ENST00000573694 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
NDE1-208ENST00000573694 CDK12Q9NYV4 1490 aaPredicted RBP13.44□□□□□ -0.26
NDE1-208ENST00000573694 POTEAQ6S8J7 498 aa13.44□□□□□ -0.26
NDE1-208ENST00000573694 MIER1Q8N108 512 aa13.44□□□□□ -0.26
NDE1-208ENST00000573694 YTHDC2Q9H6S0 1430 aaKnown RBP13.44□□□□□ -0.26
NDE1-208ENST00000573694 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
NDE1-208ENST00000573694 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
NDE1-208ENST00000573694 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
NDE1-208ENST00000573694 EIF3AQ14152 1382 aaKnown RBP13.42□□□□□ -0.26
NDE1-208ENST00000573694 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
NDE1-208ENST00000573694 PNPLA6Q8IY17 1366 aa13.42□□□□□ -0.26
NDE1-208ENST00000573694 WASHC2AQ641Q2 1341 aa13.41□□□□□ -0.26
NDE1-208ENST00000573694 DLC1Q96QB1 1528 aa13.41□□□□□ -0.26
NDE1-208ENST00000573694 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
NDE1-208ENST00000573694 C11orf95C9JLR9 678 aaPredicted RBP13.4□□□□□ -0.26
NDE1-208ENST00000573694 RXRBP28702 533 aa13.4□□□□□ -0.26
NDE1-208ENST00000573694 PSME1Q06323 249 aa13.4□□□□□ -0.26
NDE1-208ENST00000573694 NBPF1Q3BBV0 1214 aa13.4□□□□□ -0.26
NDE1-208ENST00000573694 CCDC7Q96M83 1385 aa13.4□□□□□ -0.26
NDE1-208ENST00000573694 ESCO1Q5FWF5 840 aa13.39□□□□□ -0.27
NDE1-208ENST00000573694 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
NDE1-208ENST00000573694 ORAI2Q96SN7 254 aa13.39□□□□□ -0.27
NDE1-208ENST00000573694 FNBP4Q8N3X1 1017 aaPredicted RBP13.38□□□□□ -0.27
NDE1-208ENST00000573694 ANKARQ7Z5J8 1434 aa13.38□□□□□ -0.27
NDE1-208ENST00000573694 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
NDE1-208ENST00000573694 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
NDE1-208ENST00000573694 WAPLQ7Z5K2 1190 aa13.37□□□□□ -0.27
NDE1-208ENST00000573694 STK26Q9P289 416 aa13.37□□□□□ -0.27
NDE1-208ENST00000573694 LRP6O75581 1613 aa13.37□□□□□ -0.27
NDE1-208ENST00000573694 CFAP70Q5T0N1 1121 aa13.36□□□□□ -0.27
NDE1-208ENST00000573694 KIF7Q2M1P5 1343 aa13.36□□□□□ -0.27
NDE1-208ENST00000573694 POGKQ9P215 609 aa13.35□□□□□ -0.27
NDE1-208ENST00000573694 AFF2P51816 1311 aa13.35□□□□□ -0.27
NDE1-208ENST00000573694 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
NDE1-208ENST00000573694 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
NDE1-208ENST00000573694 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
NDE1-208ENST00000573694 NUTM2BA6NNL0 878 aaPredicted RBP13.34□□□□□ -0.27
NDE1-208ENST00000573694 NUTM2EB1AL46 878 aaPredicted RBP13.34□□□□□ -0.27
NDE1-208ENST00000573694 FOXO3O43524 673 aa13.34□□□□□ -0.27
NDE1-208ENST00000573694 NUTM2AQ8IVF1 878 aaPredicted RBP13.34□□□□□ -0.27
NDE1-208ENST00000573694 QTRT2Q9H974 415 aaKnown RBP13.34□□□□□ -0.27
NDE1-208ENST00000573694 TRPC5Q9UL62 973 aaPredicted RBP13.34□□□□□ -0.27
NDE1-208ENST00000573694 PXDNQ92626 1479 aa13.34□□□□□ -0.27
NDE1-208ENST00000573694 PRAM1Q96QH2 718 aa13.33□□□□□ -0.28
NDE1-208ENST00000573694 PHF8Q9UPP1 1060 aa13.33□□□□□ -0.28
NDE1-208ENST00000573694 SPATA31A3Q5VYP0 1347 aa13.33□□□□□ -0.28
NDE1-208ENST00000573694 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
NDE1-208ENST00000573694 ST20-MTHFSA0A0A6YYL1 179 aa13.32□□□□□ -0.28
NDE1-208ENST00000573694 ADGRB1O14514 1584 aa13.32□□□□□ -0.28
NDE1-208ENST00000573694 ARHGEF28Q8N1W1 1705 aaKnown RBP13.31□□□□□ -0.28
NDE1-208ENST00000573694 KRT28Q7Z3Y7 464 aa13.31□□□□□ -0.28
NDE1-208ENST00000573694 C8orf37Q96NL8 207 aa13.31□□□□□ -0.28
NDE1-208ENST00000573694 ADGRB2O60241 1585 aa13.31□□□□□ -0.28
NDE1-208ENST00000573694 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
NDE1-208ENST00000573694 FMN2Q9NZ56 1722 aa13.3□□□□□ -0.28
NDE1-208ENST00000573694 CCDC125Q86Z20 511 aa13.3□□□□□ -0.28
NDE1-208ENST00000573694 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
NDE1-208ENST00000573694 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
NDE1-208ENST00000573694 DDX17Q92841 729 aaKnown RBP13.29□□□□□ -0.28
NDE1-208ENST00000573694 USP21Q9UK80 565 aa13.29□□□□□ -0.28
NDE1-208ENST00000573694 MYOM1P52179 1685 aa13.28□□□□□ -0.28
NDE1-208ENST00000573694 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.29
NDE1-208ENST00000573694 BRD4O60885 1362 aaPredicted RBP13.27□□□□□ -0.29
NDE1-208ENST00000573694 ADAMTS2O95450 1211 aa13.26□□□□□ -0.29
NDE1-208ENST00000573694 TNS3Q68CZ2 1445 aa13.26□□□□□ -0.29
NDE1-208ENST00000573694 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.294e-8■■■■■ 43.1
NDE1-208ENST00000573694 TESK2Q96S53 571 aa13.26□□□□□ -0.29
NDE1-208ENST00000573694 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
NDE1-208ENST00000573694 ATRNO75882 1429 aa13.25□□□□□ -0.29
NDE1-208ENST00000573694 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
NDE1-208ENST00000573694 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
NDE1-208ENST00000573694 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
NDE1-208ENST00000573694 ATAD2Q6PL18 1390 aa13.23□□□□□ -0.29
NDE1-208ENST00000573694 ANP32CO43423 234 aa13.23□□□□□ -0.29
NDE1-208ENST00000573694 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
NDE1-208ENST00000573694 GJD4Q96KN9 370 aaPredicted RBP13.23□□□□□ -0.29
NDE1-208ENST00000573694 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms